Lsi02G027730 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G027730
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTo encode a PR protein, Belongs to the plant thionin family with the following members:, putative
Locationchr02 : 33975572 .. 33980729 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGTAATATGTGTATATGTCAGCTTAGAGATATCTTTGTGTACCTACTGATCATCTGACCTAATTTGGTATATTTTTCAAAAAAGAAAAAAAAGAAAGAAAGCAACAACCTCGACAAACTCAACTGGATCAGTGAACTTTAGAACTTTTTGCATGAATTTATTAAATACTATATTTTTATGCATGAAATTAATAAATTGCGGGTCATTGTTTTTATATTATTTCATTTATTTGAAATTTTTAGTATCATTTATTACAAAATTATAATCACCACATACTTATATTGAGTAATAAAATTTCTAAAAGTGTTGGTCCTTTTTTGAGTGGGATAGGTGGGTGTAGTGAAATTTCACGTTTTGATATATATATTTATATAATAATTCAAAGCTTATCTTTTATTCTCAATTTTTTTTTAAGAAAAAAAGAAGTGAATATGTGTCTCTTTAAAAGATTAATAAAAAAAAAATAGTTTATTTTTAATGCATCTTTTTTGAAGTGATGCATTCCGATAAAATAAAAAATTACTTGTTTTTCTAATTTTTCTTTTAAATAACTTTTTTTTTTTTTGAGACGTTAGCTACTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTAATTTACAATATTTGTCCAATTAATCCTTACATGATTAGGATGATCAAAGCTCATTATGATAATACTATTTTTTTTTATATTATTAAAAAGTAAACAAAAAATTAACAACCAAAAAGTACCCTTGTTTTTCAAAATTTCTATACAAATTTTGCAAATTAACATTGGATACAAATTTGTGCATTGACCTTAAAATTAACGAAGTCTACCATAAATTGTTTTGGACCTTTTGGTAATTTGGTGGACATGGAAAACTCAATTAACTTTGACCATCTATATAGAAATTCCACCAACTTCCAAATGAACTATAGATTTTCTTTGAAATTTTCAATTTTTTTTTTTTTTTTTTTTGGTAATTGGCCAATTAGTGATCTTGGTTTTCTTTTTCCTTCCAATTAAAATATCCTATAATGGAAAACATCATGAAACTCACAAATTTCAGCCTACTTATCAATTTTGTGTATGACTCGTGCATTAAGGGTTTGAATTAATTAATGGCAACATGTTTCCTTCAAAGCTTTCTAAAAACAACAAAATTTAACTGCTTTTTGCTAATTAATTGAGTATCTAACTGCTTCATTTTCATTTTCTTTTATATTCGTGAGTGTCCGACTAGCTTACTGCTTCATTTTCTAAAAGCAACAAAACTTGATTTCTATATATATATATATATATATAAAGTATTCATGATTTTCTCAAATATTGATAGAAGTTACAATTTTATATGATCTCCCAATTTTAGAATTAGAAGAATCAAAATATTGTACAAAATAAACACCAAATTAATTAAAGTAGTTTTTTTTTAAATAAAGTACAAGAGATCGGGTGTACTTGAATATCTCAACTAGATTGACACGTCTATGTATAGCTCCCTCATCACAAATAGAGATGTCCACACGGCGGGGCCAGGGATGACTTCCGCGTCCCCATCCCTGCTACCGATTTCATTTCCCATCCTTGCAAAATTTTTCACGTGGATTGGAGCGGAAATTTTCCACAGAAAATTCGCAGTGATTGGATTCCCTGAGAATTTTTTCCTTTTGAATTTTTTTTTAAAAAATTTTAACTAACTTCTATCACTACTATGAAATTTTTTTACTTAAATAGTTAAATTTTTTACTCATATGTGACAAAAAGATAGGATTAAAATGTTTAATTTCATAATTCTAAAAATTAAAATTAAAATACTACAACTACATATCCTAATCTAAACTTAATATATATATAAATTAGAATTAAAATTTTATATATATAATGGGGCGGGGCGGGGATAGAGGGGGGAATATAATTTCCGTCCCTGTCTCCATTTAGCCAACCGAAAAAAATTTCTCCCCACTACCTCCCCATTTCCCGTTTAATCACGATTTTCCAACCTATTCGTGGGGCCCAGTTCTACCAGTTAAATGGACATCTCTAATCACAAATAAATTAAACTAGTTGATGAATCCAACTTCATTTTCTCAAATTTTCAAGTGCATGTTTGGGAGTGATTTTAAAATTATCAAAATTACTTTTATTATTTTAAAAATAATTTTTAATCACTTAAAATTAATTTAATATTAAATTTTACACTTTTAAATGTGATTTTTATATTATCAAAATTAATTTGAAAAAATTAAAAACATATTTTTGATTTTTAAAATAAAAAAGTGATTTATTTAACTATTTTAAAATCATTCCAAAAATGCTTTTAACACCCCTAAAAGCATGGCAGTTGGAATTTTAAATTTTAAATTTAAGTGAAAATATACCGAAGCTTAGTGGGCAAGAACTATGATGACCATGCAATCACATTGTGACATGTGGAACTCCAATATAGAAAATAAGTCATGGTCGTTAAGAGGGTTGGTGATATATTCACTAAAACCAAAACAATCATTTTAATCAAACTTTTTTTTATTAATTCAAGTTGTTGCAGAAATTGTGGTCTAAAATGTCAAAATTAAAAAAATATATGGTTTATCCATTTAAAAGAATAACAATATTTAAGCTATAATATTGCCCCAAAACCTAGAATCCATTAAGCATCCCTGATCTTAAAATTGTATGCATAATGAATATGCATCACATGAACATGAATAGATAGGTAGCAATTCTTTTAAATTTCATATATATATATACTCAAATACTTATTGAATAAGACATACTTTTTTTTTTCTCGAAGTAATTCTATGTAAAGTAATTGAAAAAATGGTTTTCAAACAAATTAATTTACTAGATGCATAAGAATGTTAAGATAAAGTGTCAAATTCATATTCCAAATCAATGGTTCAAAATTTCTTGAGTGACATTATATTAACCAATTAACATTTTGATTTTGAGACATATAATTTTACGAACCATATATGATCTTTTTTTAGTACATGTACTTTCAAAATATTTATTTTAGTTCATGTTGTTTTAAAACTTTTTATTTAGCAATTGCCCATTTAAAAAGCAATTGTTTTCGCTTTTTTTACTCTCATTACTTTTTATCACGATTTCAACACACATTATATACCGAACTCAATAAATTATTTCATTAAATATTTTCATTGTTTTGTATTAAAGGGAAGTTATGGTTGAATTAGCGATGGGTTATTTCATTTTTTGTTATGAGTTTGAATAAGAATCAACATGAATTTATCTTCAATCTACCTATATCAACTCTAATATTATATTAGATAAATACGAGTTTTCATTTTTACTCATCTCATTGTCAATTGATTTTGAGATAGAACTCCAAGTTTATCTATAATGGTATCATAGTCCATGAAACTCAAACGGATATTCTGTATAAAAAAAAAAATAAAAAAAAACATCTTAAAGAGAAATATGTTAGAAGATTCTACAAATTGTTATAGGTATATAATTTGTGTTAAAATTGTACAAGATAACATGACTTCCTAGAAGTACAAGATTAAAAAATTAGTATTTTGAAAGTACAATTAATATTAAACCAAATAAAATTAGAAAAATGATTTATTAATAAGCTTTAAAACCCCATTGAAATTATGTATCCTATGGGCCCAACTATTTTTGTTTAAAATCTTGTGTTATATGAATAAGATTTCTTTCATAAGTACATGATCTGTTGAAGTAATGATAACCCAATTTAAGTAGTCAAGGCTTCGATCATTTTCCTACTGCTTATTTTCCACAAACCCAAGTGCTTATATAAGAACCACTCTTCCCCACAACCTTAAAACCACACAAATATTAATTAAGGCTTAATTCACATCCAAATTTGAGAAAATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTAGTACTTATTTTAATTTCTTTTTTTCTTTTTTTCTTTCTAACATGGTTGAATCCATTGTATTGATTTTAAATGTTATCGACAGTGATAGTCAAAGTAATATATGTGTATATAATTCTCTATACTACATGTAGTGCGGTTAAGATTTTTCTGATGAAATAATTCGTAGAAAAGATATTTTTGCCAACGTCAAATATGAAACGTTGGAAAAAGTTGCCCTCGCTATGACTAACACTTAAAATGAGAGTAAATTTTCCTCTCTTGATATTGGATGTTATTCATTTTTTATTTTTATTTTTTTTTTTGGGTTATTGATGAACTTGGCAGCTGAGAAGAAAGTAGAAAGCTGTGTGAACTCGTGTGGTCAAACGTGCATGAAAGCTTAGAAAGCAAAAGGATGAAGGGAGAGAGGAGATGGAGCTGGGATTGGCTTAAAGATATACTATGAATAAACAAAAATCAGTGGTCAAAACAAAACCATTGGTTTACAAGGCTTATTCCAGATTTAAGCATATGTTTTGATATATTATATAGTCTCAAGTTTCTGCATGTGGTAGTTAA

mRNA sequence

ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA

Coding sequence (CDS)

ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA

Protein sequence

MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSACGS
Homology
[Close]
BLAST of Lsi02G027730 vs. TrEMBL
Match: A0A0A0KC18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-46
Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 1 

Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           M+S+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPM
Sbjct: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSA 104
           DL++MDTHYFCKLGCATS CTKFSTKKDPG+K+SN  V+  S+
Sbjct: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPGKKLSNTSVTTYSS 103

[Close]
BLAST of Lsi02G027730 vs. TrEMBL
Match: F6HX25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04840 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-20
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1 

Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVSQVSAC 105
           D++  DT YFCKLGCA+SLCT  STKK+P G+K+ + + S  + C
Sbjct: 66  DIETADTTYFCKLGCASSLCTNLSTKKNPAGEKVESCVNSCSNKC 109

[Close]
BLAST of Lsi02G027730 vs. TrEMBL
Match: A5AWP0_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_004511 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.8e-20
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1 

Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQ---KISNILVSQV 102
           D++  DT YFCKLGCA+ LCT  STKK+PG+   K+   L+ Q+
Sbjct: 66  DIETADTTYFCKLGCASXLCTNLSTKKNPGRESGKLCEFLLKQM 108

[Close]
BLAST of Lsi02G027730 vs. TrEMBL
Match: A0A061GI20_THECC (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao GN=TCM_028643 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19
Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 1 

Query: 3   SIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDL 62
           S++++C +L L+ G+STASF KCYA CF++C   P  P+ +C  KCL +C+ I SS ++ 
Sbjct: 47  SVMMVCLVLGLLVGQSTASFQKCYAGCFLLCVFIPPNPVFSCAIKCLNECI-IPSSTLE- 106

Query: 63  DHMDTHYFCKLGCATSLCTKFSTKKDPG-QKISNILVSQVSAC 105
              DT YFCKLGCATSLCT  S+K++PG QK+ + + S    C
Sbjct: 107 SGKDTQYFCKLGCATSLCTDLSSKENPGEQKVGSCVDSCSETC 147

[Close]
BLAST of Lsi02G027730 vs. TrEMBL
Match: V4ST32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 1 

Query: 3   SIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDL 62
           S++++  +  L+ G+S A+F +CY  CF++C ITPG  +G+C AKCL DC+F       L
Sbjct: 8   SLLMVYLMTGLLVGQSQAAFKECYETCFIICYITPGTTLGSCAAKCLKDCIF-PPKLHTL 67

Query: 63  DHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVSQVSAC 105
              DT YFCKLGCATSLCT  S+K +P G+K+   + S   +C
Sbjct: 68  SLQDTEYFCKLGCATSLCTNLSSKDNPAGEKVEGCVNSCSKSC 109

[Close]
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|700190113|gb|KGN45346.1| (hypothetical protein Csa_7G446640 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 1 

Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           M+S+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPM
Sbjct: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSA 104
           DL++MDTHYFCKLGCATS CTKFSTKKDPG+K+SN  V+  S+
Sbjct: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPGKKLSNTSVTTYSS 103

[Close]
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|449470525|ref|XP_004152967.1| (PREDICTED: thionin-like protein 2 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24
Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1 

Query: 1  MRSIVLICFILSLVAGRSTA--SFGKCYAKCFVVCAITPGI-PIGTCGAKCLADCLFIAS 60
          MRS+VLICFILSLVAG+STA     KCY  C  VCA+   +  +G C  KC ADC+ IAS
Sbjct: 1  MRSVVLICFILSLVAGKSTAVIEVSKCYLNCMAVCAVPSSLLTVGLCALKCTADCIAIAS 60

Query: 61 SPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK 93
          SPM+L+ +DT YFCKLGCATS CTK STKKD  +K
Sbjct: 61 SPMNLNRVDTRYFCKLGCATSCCTKSSTKKDFAEK 95

[Close]
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|659131068|ref|XP_008465492.1| (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-23
Identity = 61/95 (64.21%), Postives = 68/95 (71.58%), Query Frame = 1 

Query: 1  MRSIVLICFILSLVAGRSTASF--GKCYAKCFVVCAITPGIPI-GTCGAKCLADCLFIAS 60
          MRSIVLI FILSLVAGRST      K + KC   CAI P IP+   C  KC+ADC+ +AS
Sbjct: 1  MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61 SPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK 93
          SPMDL+ MDTHYFCKLGC T  CTK STKKD  +K
Sbjct: 61 SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLAEK 95

[Close]
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|225442677|ref|XP_002284798.1| (PREDICTED: thionin-like protein 2 [Vitis vinifera])

HSP 1 Score: 106.7 bits (265), Expect = 2.6e-20
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1 

Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVSQVSAC 105
           D++  DT YFCKLGCA+SLCT  STKK+P G+K+ + + S  + C
Sbjct: 66  DIETADTTYFCKLGCASSLCTNLSTKKNPAGEKVESCVNSCSNKC 109

[Close]
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|147789983|emb|CAN59844.1| (hypothetical protein VITISV_004511 [Vitis vinifera])

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-20
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1 

Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQ---KISNILVSQV 102
           D++  DT YFCKLGCA+ LCT  STKK+PG+   K+   L+ Q+
Sbjct: 66  DIETADTTYFCKLGCASXLCTNLSTKKNPGRESGKLCEFLLKQM 108

The following BLAST results are available for this feature:
BLAST of Lsi02G027730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi02G027730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC18_CUCSA7.2e-4685.44Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1[more]
F6HX25_VITVI1.8e-2046.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04840 PE=4 SV=... [more]
A5AWP0_VITVI6.8e-2046.15Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_004511 P... [more]
A0A061GI20_THECC2.0e-1948.54To encode a PR protein, Belongs to the plant thionin family with the following m... [more]
V4ST32_9ROSI1.7e-1845.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1[more]
BLAST of Lsi02G027730 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi02G027730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190113|gb|KGN45346.1|1.0e-4585.44hypothetical protein Csa_7G446640 [Cucumis sativus][more]
gi|449470525|ref|XP_004152967.1|1.3e-2463.16PREDICTED: thionin-like protein 2 [Cucumis sativus][more]
gi|659131068|ref|XP_008465492.1|1.9e-2364.21PREDICTED: thionin-like protein 2 [Cucumis melo][more]
gi|225442677|ref|XP_002284798.1|2.6e-2046.67PREDICTED: thionin-like protein 2 [Vitis vinifera][more]
gi|147789983|emb|CAN59844.1|9.7e-2046.15hypothetical protein VITISV_004511 [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G027730.1Lsi02G027730.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G027730CmoCh17G007890Cucurbita moschata (Rifu)cmolsiB337
Lsi02G027730Bhi09G000099Wax gourdlsiwgoB270
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G027730Cucumber (Chinese Long) v3cuclsiB198
Lsi02G027730Cucumber (Chinese Long) v3cuclsiB538
Lsi02G027730Watermelon (97103) v2lsiwmbB199
Lsi02G027730Watermelon (97103) v2lsiwmbB213
Lsi02G027730Wax gourdlsiwgoB221
Lsi02G027730Wax gourdlsiwgoB286
Lsi02G027730Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi02G027730Cucumber (Gy14) v1cgylsiB577
Lsi02G027730Cucurbita maxima (Rimu)cmalsiB051
Lsi02G027730Cucurbita maxima (Rimu)cmalsiB238
Lsi02G027730Cucurbita maxima (Rimu)cmalsiB348
Lsi02G027730Cucurbita maxima (Rimu)cmalsiB418
Lsi02G027730Cucurbita maxima (Rimu)cmalsiB823
Lsi02G027730Cucurbita moschata (Rifu)cmolsiB037
Lsi02G027730Cucurbita moschata (Rifu)cmolsiB225
Lsi02G027730Cucurbita moschata (Rifu)cmolsiB405
Lsi02G027730Cucurbita moschata (Rifu)cmolsiB810
Lsi02G027730Cucurbita pepo (Zucchini)cpelsiB113
Lsi02G027730Cucurbita pepo (Zucchini)cpelsiB442
Lsi02G027730Wild cucumber (PI 183967)cpilsiB517
Lsi02G027730Cucumber (Chinese Long) v2culsiB503
Lsi02G027730Melon (DHL92) v3.5.1lsimeB185
Lsi02G027730Melon (DHL92) v3.5.1lsimeB213
Lsi02G027730Watermelon (Charleston Gray)lsiwcgB160
Lsi02G027730Watermelon (Charleston Gray)lsiwcgB204
Lsi02G027730Watermelon (97103) v1lsiwmB176
Lsi02G027730Watermelon (97103) v1lsiwmB191
Lsi02G027730Cucumber (Gy14) v2cgyblsiB167
Lsi02G027730Cucumber (Gy14) v2cgyblsiB472
Lsi02G027730Melon (DHL92) v3.6.1lsimedB194
Lsi02G027730Melon (DHL92) v3.6.1lsimedB222
Lsi02G027730Silver-seed gourdcarlsiB106
Lsi02G027730Silver-seed gourdcarlsiB114
Lsi02G027730Silver-seed gourdcarlsiB176
Lsi02G027730Silver-seed gourdcarlsiB684
Lsi02G027730Silver-seed gourdcarlsiB937