Lsi06G000250 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAAACAGGCAGAAAAAATCCCATTCTTCTTCATTTTCTTTCTTGGGGCTGTTCAAATCAAAAAGAGGCAGAAAAGATCAAGATCATCATTACTACGAGCAACAGCAAGGCAGCAGCTGGGAGGACTTCTCATGCCCTAGCAAGGTGTGGCCGAGCGATGCTGATAAATGCCACCGTTGGGTGGCTGAACCCGGCATCGATCGAAAAGCCAAAGATTACATCGACAGGATCCATCGTAACCGCGTCTTTGAAACCCAACGCCAAACCGTCACCCTTCCTCCTAATAATTCCGACCGTTAA ATGGGAGGAAACAGGCAGAAAAAATCCCATTCTTCTTCATTTTCTTTCTTGGGGCTGTTCAAATCAAAAAGAGGCAGAAAAGATCAAGATCATCATTACTACGAGCAACAGCAAGGCAGCAGCTGGGAGGACTTCTCATGCCCTAGCAAGGTGTGGCCGAGCGATGCTGATAAATGCCACCGTTGGGTGGCTGAACCCGGCATCGATCGAAAAGCCAAAGATTACATCGACAGGATCCATCGTAACCGCGTCTTTGAAACCCAACGCCAAACCGTCACCCTTCCTCCTAATAATTCCGACCGTTAA ATGGGAGGAAACAGGCAGAAAAAATCCCATTCTTCTTCATTTTCTTTCTTGGGGCTGTTCAAATCAAAAAGAGGCAGAAAAGATCAAGATCATCATTACTACGAGCAACAGCAAGGCAGCAGCTGGGAGGACTTCTCATGCCCTAGCAAGGTGTGGCCGAGCGATGCTGATAAATGCCACCGTTGGGTGGCTGAACCCGGCATCGATCGAAAAGCCAAAGATTACATCGACAGGATCCATCGTAACCGCGTCTTTGAAACCCAACGCCAAACCGTCACCCTTCCTCCTAATAATTCCGACCGTTAA MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNSDR
BLAST of Lsi06G000250 vs. TrEMBL
Match: A0A0A0LY99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560730 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.1e-43 Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 1
BLAST of Lsi06G000250 vs. TrEMBL
Match: A0A0A0K7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.6e-26 Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 1
BLAST of Lsi06G000250 vs. TrEMBL
Match: A0A0A0KBW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25 Identity = 65/100 (65.00%), Postives = 76/100 (76.00%), Query Frame = 1
BLAST of Lsi06G000250 vs. TrEMBL
Match: A0A0A0K8W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25 Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 1
BLAST of Lsi06G000250 vs. TrEMBL
Match: A0A0A0K8V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014880 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.1e-23 Identity = 64/98 (65.31%), Postives = 71/98 (72.45%), Query Frame = 1
BLAST of Lsi06G000250 vs. TAIR10
Match: AT3G05858.1 (AT3G05858.1 unknown protein) HSP 1 Score: 64.3 bits (155), Expect = 4.9e-11 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 1
BLAST of Lsi06G000250 vs. TAIR10
Match: AT5G26620.1 (AT5G26620.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-10 Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 1
BLAST of Lsi06G000250 vs. NCBI nr
Match: gi|700210893|gb|KGN65989.1| (hypothetical protein Csa_1G560730 [Cucumis sativus]) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-42 Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 1
BLAST of Lsi06G000250 vs. NCBI nr
Match: gi|700190666|gb|KGN45870.1| (hypothetical protein Csa_6G014900 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 6.6e-26 Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 1
BLAST of Lsi06G000250 vs. NCBI nr
Match: gi|700190663|gb|KGN45867.1| (hypothetical protein Csa_6G014870 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25 Identity = 65/100 (65.00%), Postives = 76/100 (76.00%), Query Frame = 1
BLAST of Lsi06G000250 vs. NCBI nr
Match: gi|700190669|gb|KGN45873.1| (hypothetical protein Csa_6G016905 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25 Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 1
BLAST of Lsi06G000250 vs. NCBI nr
Match: gi|700190664|gb|KGN45868.1| (hypothetical protein Csa_6G014880 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 3.1e-23 Identity = 64/98 (65.31%), Postives = 71/98 (72.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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