Lsi10G005800 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G005800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DUF4228 domain protein
Location	chr10 : 8418467 .. 8418940 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTTGCGTGTCGTCCGATTCGATCAATGTTGCTACAGCGAAATTGATTCTTATTGATGGAACTTTGGTGGAATTCTCTTACCCAGTAAAAGTTTCTTACGTACTACAGAAACATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGATTTTGACGACGTCGTTTACGCCGTTGACGACGACGATGAGCTCCAACTTGGGCAGCTTTACTTTGCCTTGCCGTTGGACAGACTGAACCAGCCGCTGCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCTAGCTCAGCGCTTATGAAGGCTGGCGGCGGAGGGACGGAGAAATGTGGATCTAGACGAACGGCGATTTCACCGGTGGCATTTTCCGATGAGGAGTTTAGGAAGGTTCCGAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

mRNA sequence

ATGGGCATTTGCGTGTCGTCCGATTCGATCAATGTTGCTACAGCGAAATTGATTCTTATTGATGGAACTTTGGTGGAATTCTCTTACCCAGTAAAAGTTTCTTACGTACTACAGAAACATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGATTTTGACGACGTCGTTTACGCCGTTGACGACGACGATGAGCTCCAACTTGGGCAGCTTTACTTTGCCTTGCCGTTGGACAGACTGAACCAGCCGCTGCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCTAGCTCAGCGCTTATGAAGGCTGGCGGCGGAGGGACGGAGAAATGTGGATCTAGACGAACGGCGATTTCACCGGTGGCATTTTCCGATGAGGAGTTTAGGAAGGTTCCGAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

Coding sequence (CDS)

ATGGGCATTTGCGTGTCGTCCGATTCGATCAATGTTGCTACAGCGAAATTGATTCTTATTGATGGAACTTTGGTGGAATTCTCTTACCCAGTAAAAGTTTCTTACGTACTACAGAAACATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGATTTTGACGACGTCGTTTACGCCGTTGACGACGACGATGAGCTCCAACTTGGGCAGCTTTACTTTGCCTTGCCGTTGGACAGACTGAACCAGCCGCTGCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCTAGCTCAGCGCTTATGAAGGCTGGCGGCGGAGGGACGGAGAAATGTGGATCTAGACGAACGGCGATTTCACCGGTGGCATTTTCCGATGAGGAGTTTAGGAAGGTTCCGAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

Protein sequence

MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAVDDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISPVAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE

Homology

[Close]

BLAST of Lsi10G005800 vs. TrEMBL
Match: A0A0A0LQ02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286540 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.9e-57
Identity = 128/162 (79.01%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGICVSS S NVATAKLIL+DGTLVE+SYPVKVSYVL KHPASFICNSD+MDFDDVVYAV
Sbjct: 1   MGICVSSHSTNVATAKLILVDGTLVEYSYPVKVSYVLHKHPASFICNSDDMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMK---AGGGGTEKCGSRRTA 120
           D+DDELQLGQLYFALPL+RLNQ +QAEEMAALAVKASSALMK    GGGG EKCGSR TA
Sbjct: 61  DEDDELQLGQLYFALPLERLNQRMQAEEMAALAVKASSALMKGGGGGGGGMEKCGSRGTA 120

Query: 121 ISPVA-FSDEEFRKVPRR-GLKKGMGSGRSRKFTAKLSAIPE 158
           + PV  + +EE RK  R+ GLKK  G   SRKF AKLSAIPE
Sbjct: 121 VIPVGNWEEEELRKGSRKVGLKKKKGG--SRKFRAKLSAIPE 160

[Close]

BLAST of Lsi10G005800 vs. TrEMBL
Match: A0A0A0KJB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.7e-48
Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG+L EFSYPVKVSYVLQK+P+ FICNSDEMDFDD + A+
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DD+ELQLGQLYFALPL+RL QPLQAEEMAALAVKA+SALMK  GG  +KCG RR ++SP
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGG--DKCGHRRRSVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ EE +   R    +G G+G  +KF A L AIPE
Sbjct: 121 VVFTVEELKTRKRVAAGRG-GAGGRKKFAANLMAIPE 154

[Close]

BLAST of Lsi10G005800 vs. TrEMBL
Match: M5VRF9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012673mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 109/162 (67.28%), Postives = 123/162 (75.93%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS S  VATAKLIL DG L E+ YPVKVSYVLQK+PASFICNSDEMDFDD+V AV
Sbjct: 1   MGICSSSGSTQVATAKLILQDGKLQEYPYPVKVSYVLQKNPASFICNSDEMDFDDIVQAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           ++++ELQ GQLYFALPL  L  PLQAEEMAALAVKASSALMK+GG   EKCG RR ++S 
Sbjct: 61  NENEELQPGQLYFALPLSWLKHPLQAEEMAALAVKASSALMKSGG---EKCGCRRNSVSQ 120

Query: 121 VAFSDEEF----RKVPRRGLKK-GMGSGRSRKFTAKLSAIPE 158
           V  S +E     R VP  G  + G GSG +R+  A LSAIPE
Sbjct: 121 VMISGQEVKDRRRVVPAGGASRTGRGSGGNRRCAALLSAIPE 159

[Close]

BLAST of Lsi10G005800 vs. TrEMBL
Match: F6I223_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00140 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-44
Identity = 107/166 (64.46%), Postives = 122/166 (73.49%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC S D+ +VATAKLIL DG L EFSYPVKVSYVLQK+P+ FICNSDEMDFDDVV A+
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
            DD+ELQ GQLYFALPL RL QPLQAEEMAALAVKASSALMK+GG   +KC  RR ++SP
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMKSGG---DKCRCRRKSLSP 120

Query: 121 VAFSDEEFRKVPRR---------GLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ E+  K   R         GL++G   G  R     LS+IPE
Sbjct: 121 VMFAGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Lsi10G005800 vs. TrEMBL
Match: F6I227_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00180 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-44
Identity = 107/166 (64.46%), Postives = 121/166 (72.89%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC S D+ +VATAKLIL DG L EFSYPVKVSYVLQK+P+ FICNSDEMDFDDVV A+
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
            DD+ELQ GQLYFALPL RL QPLQAEEMAALAVKASSALMK+GG   +KC  RR ++SP
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMKSGG---DKCRCRRKSLSP 120

Query: 121 VAFSDEEFRKVPRR---------GLKKGMGSGRSRKFTAKLSAIPE 158
             FS E+  K   R         GL++G   G  R     LS+IPE
Sbjct: 121 AMFSGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Lsi10G005800 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein)

HSP 1 Score: 170.2 bits (430), Expect = 9.8e-43
Identity = 97/163 (59.51%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC S +S  VATAKLIL DG ++EF+ PVKV YVLQK+P  FICNSD+MDFD+VV A+
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGG-GTEKCGSRRTAIS 120
             D+E QLGQLYFALPL  L+  L+AEEMAALAVKASSALM++GG  G +KC  RR  +S
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PVAFSDEEFRKV-----PRRGLKKGMGSGRSRKFTAKLSAIPE 158
           PV FS      V      R G ++G G    RK+ AKLS I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRGGGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of Lsi10G005800 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 9.5e-38
Identity = 89/146 (60.96%), Postives = 105/146 (71.92%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG ++EF+ PVKV YVL K+P  FICNSD+MDFDD V A+
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
             D+ELQLGQ+YFALPL  L QPL+AEEMAALAVKASSALM+ GGG     G RR  + P
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGG-----GCRRKCVEP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSR 147
           +  SD+   +V       G GSGR +
Sbjct: 121 IV-SDKLRMRVGSGDDTVGSGSGRRK 140

[Close]

BLAST of Lsi10G005800 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-36
Identity = 89/162 (54.94%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MG C S +S+   +AKLIL+DGTL EFS PVKV  +LQK+P SF+CNSDEMDFDD V AV
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
             ++EL+ GQLYF LPL  LN PL+AEEMAALAVKASSAL K+GG G        +    
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWV------SGDDD 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGR-----SRKFTAKLSAIPE 158
           V  S++ ++K    G+K   G GR      R+FTA LS I E
Sbjct: 121 VTTSEKTYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of Lsi10G005800 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein)

HSP 1 Score: 145.6 bits (366), Expect = 2.6e-35
Identity = 89/165 (53.94%), Postives = 110/165 (66.67%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MG C S +S    TAKLIL DGTL EFS PVKV  +LQK+P SF+CNSD+MDFDD V AV
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
              ++L+ G+LYF LPL  LN PL+A+EMAALAVKASSAL K+GGGG             
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGG------------- 120

Query: 121 VAFSDEE-----FRKVPRRGL-KKGMGSGRS--RKFTAKLSAIPE 158
           ++++DE+      R+V R G   +G G G    RKFTA+LS+I E
Sbjct: 121 LSYNDEDVGECRVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of Lsi10G005800 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1


Query: 1   MGICVSSDS----INVATAKLILIDGTLVEFSYPVKVSYVLQKHPAS----------FIC 60
           MG+CVS +      +  TAK++ I+G L E+  PV  S VL+    S          F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDEMDFDDVVYAVDDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGG 120
           NSD + +DD + A++ D+ LQ  Q+YF LP+ +    L A +MAALAVKAS A+ KA G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

Query: 121 GTEKCGSRRTAISPV 122
              +  S R  ISPV
Sbjct: 121 KNRRRRSGR--ISPV 133

[Close]

BLAST of Lsi10G005800 vs. NCBI nr
Match: gi|659115911|ref|XP_008457802.1| (PREDICTED: uncharacterized protein LOC103497404 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 9.2e-59
Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGICVSSDS NVATAKLILIDGTLVE+SYPVKVSYVLQKHP+SFICNSD+MDFDDVVYAV
Sbjct: 1   MGICVSSDSTNVATAKLILIDGTLVEYSYPVKVSYVLQKHPSSFICNSDDMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMK-AGGGGTEKCGSRRTAIS 120
           D+DDELQLGQLYFALPL+RLNQ +QAEEMAALAVKASSALMK  GGGG EKCGS+ TA+ 
Sbjct: 61  DEDDELQLGQLYFALPLERLNQRMQAEEMAALAVKASSALMKGGGGGGMEKCGSKGTAVI 120

Query: 121 PVAFSDEE--FRKVPRR-GLKKGMGSGRSRKFTAKLSAIPE 158
           PV   +EE  FRK PR+ GLKK    G SRKF AKLSAIPE
Sbjct: 121 PVGNCEEEEGFRKEPRKGGLKK---KGGSRKFRAKLSAIPE 158

[Close]

BLAST of Lsi10G005800 vs. NCBI nr
Match: gi|449460614|ref|XP_004148040.1| (PREDICTED: uncharacterized protein LOC101206880 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 128/162 (79.01%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGICVSS S NVATAKLIL+DGTLVE+SYPVKVSYVL KHPASFICNSD+MDFDDVVYAV
Sbjct: 1   MGICVSSHSTNVATAKLILVDGTLVEYSYPVKVSYVLHKHPASFICNSDDMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMK---AGGGGTEKCGSRRTA 120
           D+DDELQLGQLYFALPL+RLNQ +QAEEMAALAVKASSALMK    GGGG EKCGSR TA
Sbjct: 61  DEDDELQLGQLYFALPLERLNQRMQAEEMAALAVKASSALMKGGGGGGGGMEKCGSRGTA 120

Query: 121 ISPVA-FSDEEFRKVPRR-GLKKGMGSGRSRKFTAKLSAIPE 158
           + PV  + +EE RK  R+ GLKK  G   SRKF AKLSAIPE
Sbjct: 121 VIPVGNWEEEELRKGSRKVGLKKKKGG--SRKFRAKLSAIPE 160

[Close]

BLAST of Lsi10G005800 vs. NCBI nr
Match: gi|1009144947|ref|XP_015890068.1| (PREDICTED: uncharacterized protein LOC107424725 [Ziziphus jujuba])

HSP 1 Score: 199.1 bits (505), Expect = 5.6e-48
Identity = 115/167 (68.86%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SSDS +VATAKLIL DG L EFSYPVKVSY+LQK+P  FICNSDEMDFDDVV AV
Sbjct: 1   MGICSSSDSTHVATAKLILQDGRLEEFSYPVKVSYILQKNPTCFICNSDEMDFDDVVRAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DDD LQ GQLYFALPL RL  PLQAEEMAALAVKASSALMK    GTEKCG RR A+SP
Sbjct: 61  NDDDVLQPGQLYFALPLHRLKYPLQAEEMAALAVKASSALMK---NGTEKCGYRRKAVSP 120

Query: 121 VAFSDEEFRKVPRR-----GLKKGMGSGR-----SRKFTAKLSAIPE 158
           V FS E+ +   R      G + G+ SGR      RKFTA L++IPE
Sbjct: 121 VIFSGEDVKSTQRAAAVVGGYEGGLRSGRRRSGGGRKFTAMLNSIPE 164

[Close]

BLAST of Lsi10G005800 vs. NCBI nr
Match: gi|449448388|ref|XP_004141948.1| (PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-47
Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG+L EFSYPVKVSYVLQK+P+ FICNSDEMDFDD + A+
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DD+ELQLGQLYFALPL+RL QPLQAEEMAALAVKA+SALMK  GG  +KCG RR ++SP
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGG--DKCGHRRRSVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ EE +   R    +G G+G  +KF A L AIPE
Sbjct: 121 VVFTVEELKTRKRVAAGRG-GAGGRKKFAANLMAIPE 154

[Close]

BLAST of Lsi10G005800 vs. NCBI nr
Match: gi|659079290|ref|XP_008440178.1| (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-47
Identity = 107/157 (68.15%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG+L EFSYPVKVSYVLQK+P+ FICNSDEMDFDD + A+
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DD+ELQ+GQLYFALPL+RL QPLQAEEMAALAVKA+SALMK  GG  +KCG RR ++SP
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGG--DKCGHRRRSVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ EE +   R    +G G+G  +KF A L AIPE
Sbjct: 121 VVFTVEELKTRKRVAAGRG-GAGGRKKFAANLMAIPE 154

The following BLAST results are available for this feature:

BLAST of Lsi10G005800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G005800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ02_CUCSA	7.9e-57	79.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286540 PE=4 SV=1	[more]
A0A0A0KJB4_CUCSA	8.7e-48	68.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1	[more]
M5VRF9_PRUPE	1.2e-44	67.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012673mg PE=4 SV=1	[more]
F6I223_VITVI	1.5e-44	64.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00140 PE=4 SV=...	[more]
F6I227_VITVI	2.0e-44	64.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00180 PE=4 SV=...	[more]

BLAST of Lsi10G005800 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23690.1	9.8e-43	59.51	unknown protein	[more]
AT4G37240.1	9.5e-38	60.96	unknown protein	[more]
AT5G66580.1	3.1e-36	54.94	unknown protein	[more]
AT3G50800.1	2.6e-35	53.94	unknown protein	[more]
AT1G76600.1	1.6e-16	40.74	unknown protein	[more]

BLAST of Lsi10G005800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115911\|ref\|XP_008457802.1\|	9.2e-59	81.37	PREDICTED: uncharacterized protein LOC103497404 [Cucumis melo]	[more]
gi\|449460614\|ref\|XP_004148040.1\|	1.1e-56	79.01	PREDICTED: uncharacterized protein LOC101206880 [Cucumis sativus]	[more]
gi\|1009144947\|ref\|XP_015890068.1\|	5.6e-48	68.86	PREDICTED: uncharacterized protein LOC107424725 [Ziziphus jujuba]	[more]
gi\|449448388\|ref\|XP_004141948.1\|	1.2e-47	68.79	PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus]	[more]
gi\|659079290\|ref\|XP_008440178.1\|	2.1e-47	68.15	PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G005800.1	Lsi10G005800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..157 score: 5.3
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 4..157 score: 8.4
None	No IPR available	PANTHER	PTHR33052:SF17	SUBFAMILY NOT NAMED	coord: 4..157 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G005800	Csa2G286540	Cucumber (Chinese Long) v2	culsiB093
Lsi10G005800	CSPI02G14420	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G005800	Cucsa.366720	Cucumber (Gy14) v1	cgylsiB594
Lsi10G005800	CmaCh20G011510	Cucurbita maxima (Rimu)	cmalsiB508
Lsi10G005800	CmaCh02G005480	Cucurbita maxima (Rimu)	cmalsiB553
Lsi10G005800	CmoCh02G005600	Cucurbita moschata (Rifu)	cmolsiB538
Lsi10G005800	Cla020176	Watermelon (97103) v1	lsiwmB065
Lsi10G005800	MELO3C020884	Melon (DHL92) v3.5.1	lsimeB046
Lsi10G005800	ClCG02G012900	Watermelon (Charleston Gray)	lsiwcgB045
Lsi10G005800	MELO3C020884.2	Melon (DHL92) v3.6.1	lsimedB048
Lsi10G005800	Cla97C02G038580	Watermelon (97103) v2	lsiwmbB044
Lsi10G005800	Bhi10G001786	Wax gourd	lsiwgoB078
Lsi10G005800	Bhi10G001779	Wax gourd	lsiwgoB073
Lsi10G005800	Cp4.1LG05g11340	Cucurbita pepo (Zucchini)	cpelsiB595
Lsi10G005800	Cp4.1LG16g00540	Cucurbita pepo (Zucchini)	cpelsiB223
Lsi10G005800	CsGy2G014320	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G005800	Carg27910	Silver-seed gourd	carlsiB773
Lsi10G005800	Carg11623	Silver-seed gourd	carlsiB968
Lsi10G005800	Carg05248	Silver-seed gourd	carlsiB738
Lsi10G005800	CsaV3_2G016980	Cucumber (Chinese Long) v3	cuclsiB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G005800	Silver-seed gourd	carlsiB963
Lsi10G005800	Cucumber (Chinese Long) v3	cuclsiB446
Lsi10G005800	Watermelon (97103) v2	lsiwmbB038
Lsi10G005800	Wax gourd	lsiwgoB082
Lsi10G005800	Bottle gourd (USVL1VR-Ls)	lsilsiB027
Lsi10G005800	Cucurbita maxima (Rimu)	cmalsiB546
Lsi10G005800	Cucurbita moschata (Rifu)	cmolsiB495
Lsi10G005800	Cucurbita moschata (Rifu)	cmolsiB530
Lsi10G005800	Cucurbita pepo (Zucchini)	cpelsiB604
Lsi10G005800	Cucumber (Chinese Long) v2	culsiB420
Lsi10G005800	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G005800	Cucumber (Gy14) v2	cgyblsiB388
Lsi10G005800	Melon (DHL92) v3.6.1	lsimedB056