Lsi10G005800.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G005800.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DUF4228 domain protein
Location	chr10 : 8418467 .. 8418940 (+)
Sequence length	474

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTTGCGTGTCGTCCGATTCGATCAATGTTGCTACAGCGAAATTGATTCTTATTGATGGAACTTTGGTGGAATTCTCTTACCCAGTAAAAGTTTCTTACGTACTACAGAAACATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGATTTTGACGACGTCGTTTACGCCGTTGACGACGACGATGAGCTCCAACTTGGGCAGCTTTACTTTGCCTTGCCGTTGGACAGACTGAACCAGCCGCTGCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCTAGCTCAGCGCTTATGAAGGCTGGCGGCGGAGGGACGGAGAAATGTGGATCTAGACGAACGGCGATTTCACCGGTGGCATTTTCCGATGAGGAGTTTAGGAAGGTTCCGAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

mRNA sequence

ATGGGCATTTGCGTGTCGTCCGATTCGATCAATGTTGCTACAGCGAAATTGATTCTTATTGATGGAACTTTGGTGGAATTCTCTTACCCAGTAAAAGTTTCTTACGTACTACAGAAACATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGATTTTGACGACGTCGTTTACGCCGTTGACGACGACGATGAGCTCCAACTTGGGCAGCTTTACTTTGCCTTGCCGTTGGACAGACTGAACCAGCCGCTGCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCTAGCTCAGCGCTTATGAAGGCTGGCGGCGGAGGGACGGAGAAATGTGGATCTAGACGAACGGCGATTTCACCGGTGGCATTTTCCGATGAGGAGTTTAGGAAGGTTCCGAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

Coding sequence (CDS)

ATGGGCATTTGCGTGTCGTCCGATTCGATCAATGTTGCTACAGCGAAATTGATTCTTATTGATGGAACTTTGGTGGAATTCTCTTACCCAGTAAAAGTTTCTTACGTACTACAGAAACATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGATTTTGACGACGTCGTTTACGCCGTTGACGACGACGATGAGCTCCAACTTGGGCAGCTTTACTTTGCCTTGCCGTTGGACAGACTGAACCAGCCGCTGCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCTAGCTCAGCGCTTATGAAGGCTGGCGGCGGAGGGACGGAGAAATGTGGATCTAGACGAACGGCGATTTCACCGGTGGCATTTTCCGATGAGGAGTTTAGGAAGGTTCCGAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

Protein sequence

MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAVDDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISPVAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE

Homology

[Close]

BLAST of Lsi10G005800.1 vs. TrEMBL
Match: A0A0A0LQ02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286540 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.9e-57
Identity = 128/162 (79.01%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGICVSS S NVATAKLIL+DGTLVE+SYPVKVSYVL KHPASFICNSD+MDFDDVVYAV
Sbjct: 1   MGICVSSHSTNVATAKLILVDGTLVEYSYPVKVSYVLHKHPASFICNSDDMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMK---AGGGGTEKCGSRRTA 120
           D+DDELQLGQLYFALPL+RLNQ +QAEEMAALAVKASSALMK    GGGG EKCGSR TA
Sbjct: 61  DEDDELQLGQLYFALPLERLNQRMQAEEMAALAVKASSALMKGGGGGGGGMEKCGSRGTA 120

Query: 121 ISPVA-FSDEEFRKVPRR-GLKKGMGSGRSRKFTAKLSAIPE 158
           + PV  + +EE RK  R+ GLKK  G   SRKF AKLSAIPE
Sbjct: 121 VIPVGNWEEEELRKGSRKVGLKKKKGG--SRKFRAKLSAIPE 160

[Close]

BLAST of Lsi10G005800.1 vs. TrEMBL
Match: A0A0A0KJB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.7e-48
Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG+L EFSYPVKVSYVLQK+P+ FICNSDEMDFDD + A+
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DD+ELQLGQLYFALPL+RL QPLQAEEMAALAVKA+SALMK  GG  +KCG RR ++SP
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGG--DKCGHRRRSVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ EE +   R    +G G+G  +KF A L AIPE
Sbjct: 121 VVFTVEELKTRKRVAAGRG-GAGGRKKFAANLMAIPE 154

[Close]

BLAST of Lsi10G005800.1 vs. TrEMBL
Match: M5VRF9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012673mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 109/162 (67.28%), Postives = 123/162 (75.93%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS S  VATAKLIL DG L E+ YPVKVSYVLQK+PASFICNSDEMDFDD+V AV
Sbjct: 1   MGICSSSGSTQVATAKLILQDGKLQEYPYPVKVSYVLQKNPASFICNSDEMDFDDIVQAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           ++++ELQ GQLYFALPL  L  PLQAEEMAALAVKASSALMK+GG   EKCG RR ++S 
Sbjct: 61  NENEELQPGQLYFALPLSWLKHPLQAEEMAALAVKASSALMKSGG---EKCGCRRNSVSQ 120

Query: 121 VAFSDEEF----RKVPRRGLKK-GMGSGRSRKFTAKLSAIPE 158
           V  S +E     R VP  G  + G GSG +R+  A LSAIPE
Sbjct: 121 VMISGQEVKDRRRVVPAGGASRTGRGSGGNRRCAALLSAIPE 159

[Close]

BLAST of Lsi10G005800.1 vs. TrEMBL
Match: F6I223_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00140 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-44
Identity = 107/166 (64.46%), Postives = 122/166 (73.49%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC S D+ +VATAKLIL DG L EFSYPVKVSYVLQK+P+ FICNSDEMDFDDVV A+
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
            DD+ELQ GQLYFALPL RL QPLQAEEMAALAVKASSALMK+GG   +KC  RR ++SP
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMKSGG---DKCRCRRKSLSP 120

Query: 121 VAFSDEEFRKVPRR---------GLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ E+  K   R         GL++G   G  R     LS+IPE
Sbjct: 121 VMFAGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Lsi10G005800.1 vs. TrEMBL
Match: F6I227_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00180 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-44
Identity = 107/166 (64.46%), Postives = 121/166 (72.89%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC S D+ +VATAKLIL DG L EFSYPVKVSYVLQK+P+ FICNSDEMDFDDVV A+
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
            DD+ELQ GQLYFALPL RL QPLQAEEMAALAVKASSALMK+GG   +KC  RR ++SP
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMKSGG---DKCRCRRKSLSP 120

Query: 121 VAFSDEEFRKVPRR---------GLKKGMGSGRSRKFTAKLSAIPE 158
             FS E+  K   R         GL++G   G  R     LS+IPE
Sbjct: 121 AMFSGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Lsi10G005800.1 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein)

HSP 1 Score: 170.2 bits (430), Expect = 9.8e-43
Identity = 97/163 (59.51%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC S +S  VATAKLIL DG ++EF+ PVKV YVLQK+P  FICNSD+MDFD+VV A+
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGG-GTEKCGSRRTAIS 120
             D+E QLGQLYFALPL  L+  L+AEEMAALAVKASSALM++GG  G +KC  RR  +S
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PVAFSDEEFRKV-----PRRGLKKGMGSGRSRKFTAKLSAIPE 158
           PV FS      V      R G ++G G    RK+ AKLS I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRGGGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of Lsi10G005800.1 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 9.5e-38
Identity = 89/146 (60.96%), Postives = 105/146 (71.92%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG ++EF+ PVKV YVL K+P  FICNSD+MDFDD V A+
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
             D+ELQLGQ+YFALPL  L QPL+AEEMAALAVKASSALM+ GGG     G RR  + P
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGG-----GCRRKCVEP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSR 147
           +  SD+   +V       G GSGR +
Sbjct: 121 IV-SDKLRMRVGSGDDTVGSGSGRRK 140

[Close]

BLAST of Lsi10G005800.1 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-36
Identity = 89/162 (54.94%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MG C S +S+   +AKLIL+DGTL EFS PVKV  +LQK+P SF+CNSDEMDFDD V AV
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
             ++EL+ GQLYF LPL  LN PL+AEEMAALAVKASSAL K+GG G        +    
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWV------SGDDD 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGR-----SRKFTAKLSAIPE 158
           V  S++ ++K    G+K   G GR      R+FTA LS I E
Sbjct: 121 VTTSEKTYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of Lsi10G005800.1 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein)

HSP 1 Score: 145.6 bits (366), Expect = 2.6e-35
Identity = 89/165 (53.94%), Postives = 110/165 (66.67%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MG C S +S    TAKLIL DGTL EFS PVKV  +LQK+P SF+CNSD+MDFDD V AV
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
              ++L+ G+LYF LPL  LN PL+A+EMAALAVKASSAL K+GGGG             
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGG------------- 120

Query: 121 VAFSDEE-----FRKVPRRGL-KKGMGSGRS--RKFTAKLSAIPE 158
           ++++DE+      R+V R G   +G G G    RKFTA+LS+I E
Sbjct: 121 LSYNDEDVGECRVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of Lsi10G005800.1 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1


Query: 1   MGICVSSDS----INVATAKLILIDGTLVEFSYPVKVSYVLQKHPAS----------FIC 60
           MG+CVS +      +  TAK++ I+G L E+  PV  S VL+    S          F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDEMDFDDVVYAVDDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGG 120
           NSD + +DD + A++ D+ LQ  Q+YF LP+ +    L A +MAALAVKAS A+ KA G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

Query: 121 GTEKCGSRRTAISPV 122
              +  S R  ISPV
Sbjct: 121 KNRRRRSGR--ISPV 133

[Close]

BLAST of Lsi10G005800.1 vs. NCBI nr
Match: gi|659115911|ref|XP_008457802.1| (PREDICTED: uncharacterized protein LOC103497404 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 9.2e-59
Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGICVSSDS NVATAKLILIDGTLVE+SYPVKVSYVLQKHP+SFICNSD+MDFDDVVYAV
Sbjct: 1   MGICVSSDSTNVATAKLILIDGTLVEYSYPVKVSYVLQKHPSSFICNSDDMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMK-AGGGGTEKCGSRRTAIS 120
           D+DDELQLGQLYFALPL+RLNQ +QAEEMAALAVKASSALMK  GGGG EKCGS+ TA+ 
Sbjct: 61  DEDDELQLGQLYFALPLERLNQRMQAEEMAALAVKASSALMKGGGGGGMEKCGSKGTAVI 120

Query: 121 PVAFSDEE--FRKVPRR-GLKKGMGSGRSRKFTAKLSAIPE 158
           PV   +EE  FRK PR+ GLKK    G SRKF AKLSAIPE
Sbjct: 121 PVGNCEEEEGFRKEPRKGGLKK---KGGSRKFRAKLSAIPE 158

[Close]

BLAST of Lsi10G005800.1 vs. NCBI nr
Match: gi|449460614|ref|XP_004148040.1| (PREDICTED: uncharacterized protein LOC101206880 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 128/162 (79.01%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGICVSS S NVATAKLIL+DGTLVE+SYPVKVSYVL KHPASFICNSD+MDFDDVVYAV
Sbjct: 1   MGICVSSHSTNVATAKLILVDGTLVEYSYPVKVSYVLHKHPASFICNSDDMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMK---AGGGGTEKCGSRRTA 120
           D+DDELQLGQLYFALPL+RLNQ +QAEEMAALAVKASSALMK    GGGG EKCGSR TA
Sbjct: 61  DEDDELQLGQLYFALPLERLNQRMQAEEMAALAVKASSALMKGGGGGGGGMEKCGSRGTA 120

Query: 121 ISPVA-FSDEEFRKVPRR-GLKKGMGSGRSRKFTAKLSAIPE 158
           + PV  + +EE RK  R+ GLKK  G   SRKF AKLSAIPE
Sbjct: 121 VIPVGNWEEEELRKGSRKVGLKKKKGG--SRKFRAKLSAIPE 160

[Close]

BLAST of Lsi10G005800.1 vs. NCBI nr
Match: gi|1009144947|ref|XP_015890068.1| (PREDICTED: uncharacterized protein LOC107424725 [Ziziphus jujuba])

HSP 1 Score: 199.1 bits (505), Expect = 5.6e-48
Identity = 115/167 (68.86%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SSDS +VATAKLIL DG L EFSYPVKVSY+LQK+P  FICNSDEMDFDDVV AV
Sbjct: 1   MGICSSSDSTHVATAKLILQDGRLEEFSYPVKVSYILQKNPTCFICNSDEMDFDDVVRAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DDD LQ GQLYFALPL RL  PLQAEEMAALAVKASSALMK    GTEKCG RR A+SP
Sbjct: 61  NDDDVLQPGQLYFALPLHRLKYPLQAEEMAALAVKASSALMK---NGTEKCGYRRKAVSP 120

Query: 121 VAFSDEEFRKVPRR-----GLKKGMGSGR-----SRKFTAKLSAIPE 158
           V FS E+ +   R      G + G+ SGR      RKFTA L++IPE
Sbjct: 121 VIFSGEDVKSTQRAAAVVGGYEGGLRSGRRRSGGGRKFTAMLNSIPE 164

[Close]

BLAST of Lsi10G005800.1 vs. NCBI nr
Match: gi|449448388|ref|XP_004141948.1| (PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-47
Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG+L EFSYPVKVSYVLQK+P+ FICNSDEMDFDD + A+
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DD+ELQLGQLYFALPL+RL QPLQAEEMAALAVKA+SALMK  GG  +KCG RR ++SP
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGG--DKCGHRRRSVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ EE +   R    +G G+G  +KF A L AIPE
Sbjct: 121 VVFTVEELKTRKRVAAGRG-GAGGRKKFAANLMAIPE 154

[Close]

BLAST of Lsi10G005800.1 vs. NCBI nr
Match: gi|659079290|ref|XP_008440178.1| (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-47
Identity = 107/157 (68.15%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1   MGICVSSDSINVATAKLILIDGTLVEFSYPVKVSYVLQKHPASFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG+L EFSYPVKVSYVLQK+P+ FICNSDEMDFDD + A+
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120
           +DD+ELQ+GQLYFALPL+RL QPLQAEEMAALAVKA+SALMK  GG  +KCG RR ++SP
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGG--DKCGHRRRSVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V F+ EE +   R    +G G+G  +KF A L AIPE
Sbjct: 121 VVFTVEELKTRKRVAAGRG-GAGGRKKFAANLMAIPE 154

The following BLAST results are available for this feature:

BLAST of Lsi10G005800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G005800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ02_CUCSA	7.9e-57	79.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286540 PE=4 SV=1	[more]
A0A0A0KJB4_CUCSA	8.7e-48	68.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1	[more]
M5VRF9_PRUPE	1.2e-44	67.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012673mg PE=4 SV=1	[more]
F6I223_VITVI	1.5e-44	64.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00140 PE=4 SV=...	[more]
F6I227_VITVI	2.0e-44	64.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00180 PE=4 SV=...	[more]

BLAST of Lsi10G005800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23690.1	9.8e-43	59.51	unknown protein	[more]
AT4G37240.1	9.5e-38	60.96	unknown protein	[more]
AT5G66580.1	3.1e-36	54.94	unknown protein	[more]
AT3G50800.1	2.6e-35	53.94	unknown protein	[more]
AT1G76600.1	1.6e-16	40.74	unknown protein	[more]

BLAST of Lsi10G005800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115911\|ref\|XP_008457802.1\|	9.2e-59	81.37	PREDICTED: uncharacterized protein LOC103497404 [Cucumis melo]	[more]
gi\|449460614\|ref\|XP_004148040.1\|	1.1e-56	79.01	PREDICTED: uncharacterized protein LOC101206880 [Cucumis sativus]	[more]
gi\|1009144947\|ref\|XP_015890068.1\|	5.6e-48	68.86	PREDICTED: uncharacterized protein LOC107424725 [Ziziphus jujuba]	[more]
gi\|449448388\|ref\|XP_004141948.1\|	1.2e-47	68.79	PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus]	[more]
gi\|659079290\|ref\|XP_008440178.1\|	2.1e-47	68.15	PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi10G005800	Lsi10G005800	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G005800.1.CDS.1	Lsi10G005800.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi10G005800.1	Lsi10G005800.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..157 score: 5.3
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 4..157 score: 8.4
None	No IPR available	PANTHER	PTHR33052:SF17	SUBFAMILY NOT NAMED	coord: 4..157 score: 8.4