Carg05248 (gene) Silver-seed gourd

Overview
NameCarg05248
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHTH-type transcriptional regulator
LocationCucurbita_argyrosperma_scaffold_010 : 702532 .. 702996 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCTTCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGCCACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGCAAGAAAAAAGTTCGCGGCGAATTTATCGGCGATACCCGAGTAG

mRNA sequence

ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCTTCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGCCACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGCAAGAAAAAAGTTCGCGGCGAATTTATCGGCGATACCCGAGTAG

Coding sequence (CDS)

ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCTTCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGCCACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGCAAGAAAAAAGTTCGCGGCGAATTTATCGGCGATACCCGAGTAG

Protein sequence

MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
Homology
[Close]
BLAST of Carg05248 vs. NCBI nr
Match: XP_022963140.1 (uncharacterized protein LOC111463438 [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV
Sbjct: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           FTVEELKTRKRLSAGRSGAG RKKFAANLSAIPE
Sbjct: 121 FTVEELKTRKRLSAGRSGAGGRKKFAANLSAIPE 154

[Close]
BLAST of Carg05248 vs. NCBI nr
Match: XP_023518464.1 (uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 5.1e-74
Identity = 149/154 (96.75%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           +D+EELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSP+V
Sbjct: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPVV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           FTVEELKTRKRLSAGRSGAG R KFAANLSAIPE
Sbjct: 121 FTVEELKTRKRLSAGRSGAGGRTKFAANLSAIPE 154

[Close]
BLAST of Carg05248 vs. NCBI nr
Match: XP_023003596.1 (uncharacterized protein LOC111497150 [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 5.6e-73
Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLILNDG+LQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGTLQEFSYPVKVSYILQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           +DEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSP+V
Sbjct: 61  SDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPVV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           F +EELKTRKRLSAGRSGAG R KFAANL+AIPE
Sbjct: 121 FAIEELKTRKRLSAGRSGAGGRNKFAANLTAIPE 154

[Close]
BLAST of Carg05248 vs. NCBI nr
Match: XP_004141948.1 (PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hypothetical protein Csa_6G488320 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 5.3e-71
Identity = 142/154 (92.21%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           ND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSP+V
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           FTVEELKTRKR++AGR GAG RKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]
BLAST of Carg05248 vs. NCBI nr
Match: XP_008440178.1 (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 7.6e-70
Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSES AVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           ND+EELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSP+V
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           FTVEELKTRKR++AGR GAG RKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]
BLAST of Carg05248 vs. TAIR10
Match: AT2G23690.1 (unknown protein)

HSP 1 Score: 171.0 bits (432), Expect = 5.7e-43
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSS EST VATAKLIL+DG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ +SAI
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAG---DKCSHRRRSVS 120
           + +EE QLGQLYFALPLS L   L+AEEMAALAVKA+SALM+ G     DKC  RR+ VS
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PLVFTVEELKTRKRLSAGRSG------AGARKKFAANLSAIPE 155
           P++F+   +         R+G         R+K+AA LS I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRXXXXXGRRKYAAKLSKIEE 163

[Close]
BLAST of Carg05248 vs. TAIR10
Match: AT4G37240.1 (unknown protein)

HSP 1 Score: 147.5 bits (371), Expect = 6.7e-36
Identity = 96/175 (54.86%), Postives = 113/175 (64.57%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSEST VATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA++AI
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           + +EELQLGQ+YFALPL  L+QPL+AEEMAALAVKA S+         C  RR+ V P+V
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKA-SSXXXXXXXXXC--RRKCVEPIV 120

Query: 121 FTVEELKTRKRLSAG----RSGAG-----------------ARKKFAANLSAIPE 155
                 K R R+ +G     SG+G                  RK +AA LS I E
Sbjct: 121 SD----KLRMRVGSGDDTVGSGSGRRXXXXXXXXXXXXXXXRRKCYAAELSTIDE 168

[Close]
BLAST of Carg05248 vs. TAIR10
Match: AT5G66580.1 (unknown protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 84/156 (53.85%), Postives = 103/156 (66.03%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MG C+S ES    +AKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA+SA+
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKC-GAGDKCSHRRRSVSPL 120
              EEL+ GQLYF LPL+ L  PL+AEEMAALAVKA+SAL K  G G        + S  
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWVSGDDDVTTSEK 120

Query: 121 VFTVEELKTRKRLSAGRSGAG-ARKKFAANLSAIPE 155
            +  + +   K    G  G G  +++F ANLS I E
Sbjct: 121 TYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]
BLAST of Carg05248 vs. TAIR10
Match: AT3G50800.1 (unknown protein)

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-32
Identity = 81/163 (49.69%), Postives = 103/163 (63.19%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MG C+S ES    TAKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+ A+
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
              E+L+ G+LYF LPL+ L  PL+A+EMAALAVKA+SAL K G G            L 
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGG-----------LS 120

Query: 121 FTVEELKTRKRLSAGRSGAG---------ARKKFAANLSAIPE 155
           +  E++   +     R+G G          R+KF A LS+I E
Sbjct: 121 YNDEDVGECRVRRVKRNGCGGRXXXXXXXGRRKFTAELSSIAE 152

[Close]
BLAST of Carg05248 vs. TAIR10
Match: AT1G21010.1 (unknown protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-15
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 0 

Query: 1   MGICSS---SESTAVATAKLILNDGSLQEFSYPVKVSYVLQ-------------KNPSCF 60
           MGIC S    +S +  T K++  +G L+E++ PV  S VL+             +  S F
Sbjct: 1   MGICVSFRREDSNSSPTVKIVTVNGDLREYNVPVIASQVLEAESAAAXXXXXXXRPSSYF 60

Query: 61  ICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCG 120
           IC+SD + +DD + AI  EE LQ  Q+YF LP+S+ +  L A +MAALAVKA+ A+    
Sbjct: 61  ICDSDSLYYDDFIPAIKSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNSV 120

[Close]
BLAST of Carg05248 vs. TrEMBL
Match: tr|A0A0A0KJB4|A0A0A0KJB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.5e-71
Identity = 142/154 (92.21%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           ND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSP+V
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           FTVEELKTRKR++AGR GAG RKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]
BLAST of Carg05248 vs. TrEMBL
Match: tr|A0A1S3B0H3|A0A1S3B0H3_CUCME (uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.0e-70
Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSES AVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           ND+EELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSP+V
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE 155
           FTVEELKTRKR++AGR GAG RKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]
BLAST of Carg05248 vs. TrEMBL
Match: tr|A0A2P4MNA5|A0A2P4MNA5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26439 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-48
Identity = 114/161 (70.81%), Postives = 129/161 (80.12%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSS+ST VATAKLIL DG LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDD +SA+
Sbjct: 1   MGICSSSDSTNVATAKLILQDGRLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAV 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           NDE+ELQLGQLYFALPLS+L+ PLQAEEMAALAVKANSALMK   G+KC  RR+     V
Sbjct: 61  NDEDELQLGQLYFALPLSKLQYPLQAEEMAALAVKANSALMKGTGGEKCRCRRKP----V 120

Query: 121 FTVEELKTRKR-------LSAGRSGAGARKKFAANLSAIPE 155
           F+  E+K+ +        L  GR+G+G+R  F A LSAIPE
Sbjct: 121 FSGGEVKSPRSVVVAGDGLRRGRNGSGSR-NFTAMLSAIPE 156

[Close]
BLAST of Carg05248 vs. TrEMBL
Match: tr|A0A2I4F417|A0A2I4F417_9ROSI (uncharacterized protein LOC108995310 OS=Juglans regia OX=51240 GN=LOC108995310 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-48
Identity = 109/165 (66.06%), Postives = 127/165 (76.97%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSS ST VATAKL+L DG LQEFSYPVKV+Y+LQKNP+CFICN+DEMDFDD L A+
Sbjct: 1   MGICSSSSSTDVATAKLVLQDGRLQEFSYPVKVAYLLQKNPTCFICNADEMDFDDVLLAV 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120
           ND EELQ+GQLYFALPLS+LK PLQ EEMAALAVKA+SALMK   GD+    R+ +SPLV
Sbjct: 61  NDYEELQVGQLYFALPLSKLKHPLQPEEMAALAVKASSALMKGSGGDRFGCGRKPISPLV 120

Query: 121 FTVEELKTRKRLSAGRSGAGARK-----------KFAANLSAIPE 155
           F   +LK+++R  AG +G G R+           KF A LSAIPE
Sbjct: 121 FQGGDLKSQRREIAGDAGGGLRRGRNGGGSGGKGKFTALLSAIPE 165

[Close]
BLAST of Carg05248 vs. TrEMBL
Match: tr|A0A1R3INP4|A0A1R3INP4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_22169 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-48
Identity = 113/162 (69.75%), Postives = 127/162 (78.40%), Query Frame = 0 

Query: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSS EST VATAKLIL DG LQEF YPVK SYVLQKNP CFICNSDEMDFDD +SAI
Sbjct: 1   MGICSSCESTHVATAKLILQDGRLQEFPYPVKASYVLQKNPMCFICNSDEMDFDDVVSAI 60

Query: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRR-RSVSPL 120
           +++EELQ GQLYFALPLS LK PLQAEEMAALAVKA+SALMK G GDKC  +R ++V+PL
Sbjct: 61  HEDEELQPGQLYFALPLSWLKHPLQAEEMAALAVKASSALMKSGGGDKCGCKRSKAVAPL 120

Query: 121 VFTVEELKTRKRLSA-------GRSGAGARKKFAANLSAIPE 155
           VF+ E  + +   +A       GR G G R+KF A LSAIPE
Sbjct: 121 VFSTESPRRKVASAAVGGGEKRGRGGKG-RRKFKAMLSAIPE 161

The following BLAST results are available for this feature:
BLAST of Carg05248 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963140.15.4e-7699.35uncharacterized protein LOC111463438 [Cucurbita moschata][more]
XP_023518464.15.1e-7496.75uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo][more]
XP_023003596.15.6e-7394.16uncharacterized protein LOC111497150 [Cucurbita maxima][more]
XP_004141948.15.3e-7192.21PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hy... [more]
XP_008440178.17.6e-7090.26PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo][more]
BLAST of Carg05248 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23690.15.7e-4359.51unknown protein[more]
AT4G37240.16.7e-3654.86unknown protein[more]
AT5G66580.11.8e-3353.85unknown protein[more]
AT3G50800.13.4e-3249.69unknown protein[more]
AT1G21010.13.8e-1536.03unknown protein[more]
BLAST of Carg05248 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg05248 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJB4|A0A0A0KJB4_CUCSA3.5e-7192.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1[more]
tr|A0A1S3B0H3|A0A1S3B0H3_CUCME5.0e-7090.26uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=... [more]
tr|A0A2P4MNA5|A0A2P4MNA5_QUESU1.4e-4870.81Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26439 PE=4 SV=1[more]
tr|A0A2I4F417|A0A2I4F417_9ROSI3.2e-4866.06uncharacterized protein LOC108995310 OS=Juglans regia OX=51240 GN=LOC108995310 P... [more]
tr|A0A1R3INP4|A0A1R3INP4_9ROSI3.2e-4869.75Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_22169 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025322DUF4228_plant
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05248-RACarg05248-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..154
e-value: 3.0E-26
score: 92.9
NoneNo IPR availablePANTHERPTHR33052:SF17SUBFAMILY NOT NAMEDcoord: 1..154
NoneNo IPR availablePANTHERPTHR33052FAMILY NOT NAMEDcoord: 1..154

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05248Cla001787Watermelon (97103) v1carwmB0805
Carg05248Csa6G488320Cucumber (Chinese Long) v2carcuB0826
Carg05248MELO3C007505Melon (DHL92) v3.5.1carmeB0807
Carg05248ClCG01G016340Watermelon (Charleston Gray)carwcgB0778
Carg05248CSPI06G27510Wild cucumber (PI 183967)carcpiB0846
Carg05248Cucsa.366630Cucumber (Gy14) v1carcgyB0924
Carg05248Cucsa.101880Cucumber (Gy14) v1carcgyB0918
Carg05248CmaCh03G010230Cucurbita maxima (Rimu)carcmaB1125
Carg05248CmoCh03G010260Cucurbita moschata (Rifu)carcmoB1095
Carg05248CmoCh07G007610Cucurbita moschata (Rifu)carcmoB1100
Carg05248Lsi01G010390Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05248Lsi10G005800Bottle gourd (USVL1VR-Ls)carlsiB738
Carg05248Cp4.1LG16g00540Cucurbita pepo (Zucchini)carcpeB1132
Carg05248Cp4.1LG10g02820Cucurbita pepo (Zucchini)carcpeB1128
Carg05248Cp4.1LG19g11450Cucurbita pepo (Zucchini)carcpeB1135
Carg05248CsGy2G014390Cucumber (Gy14) v2carcgybB0792
Carg05248CsGy6G026870Cucumber (Gy14) v2carcgybB0799
Carg05248MELO3C007505.2Melon (DHL92) v3.6.1carmedB0818
Carg05248CsaV3_6G042660Cucumber (Chinese Long) v3carcucB0849
Carg05248CsaV3_2G016980Cucumber (Chinese Long) v3carcucB0842
Carg05248Cla97C01G015350Watermelon (97103) v2carwmbB0839
Carg05248Bhi03G001507Wax gourdcarwgoB0944
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05248Carg00881Silver-seed gourdcarcarB428
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05248Wax gourdcarwgoB0941
Carg05248Silver-seed gourdcarcarB225
Carg05248Cucumber (Gy14) v2carcgybB0793
Carg05248Cucumber (Gy14) v2carcgybB0800
Carg05248Cucumber (Gy14) v1carcgyB0920
Carg05248Cucumber (Gy14) v1carcgyB0921
Carg05248Cucurbita maxima (Rimu)carcmaB1118
Carg05248Cucurbita maxima (Rimu)carcmaB1127
Carg05248Cucurbita maxima (Rimu)carcmaB1130
Carg05248Cucurbita moschata (Rifu)carcmoB1089
Carg05248Cucurbita moschata (Rifu)carcmoB1097
Carg05248Cucurbita pepo (Zucchini)carcpeB1129
Carg05248Cucurbita pepo (Zucchini)carcpeB1130
Carg05248Wild cucumber (PI 183967)carcpiB0839
Carg05248Wild cucumber (PI 183967)carcpiB0849
Carg05248Cucumber (Chinese Long) v2carcuB0819
Carg05248Cucumber (Chinese Long) v2carcuB0827
Carg05248Cucumber (Chinese Long) v3carcucB0843
Carg05248Bottle gourd (USVL1VR-Ls)carlsiB746
Carg05248Melon (DHL92) v3.5.1carmeB0802
Carg05248Melon (DHL92) v3.6.1carmedB0814
Carg05248Watermelon (Charleston Gray)carwcgB0786
Carg05248Watermelon (Charleston Gray)carwcgB0790
Carg05248Watermelon (97103) v1carwmB0802
Carg05248Watermelon (97103) v1carwmB0812
Carg05248Watermelon (97103) v2carwmbB0846
Carg05248Watermelon (97103) v2carwmbB0850