Cla001787 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001787
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	TMV response-related protein (AHRD V1 **-- B6UG28_MAIZE)
Location	Chr1 : 26193202 .. 26193666 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTTGCAGTTCTTCGGAATCTGCCGCCGTTGCCACCGCTAAGTTGATCCTTCACGACGGAAGCCTGCAGGAATTTTCGTATCCGGTTAAGGTTTCGTATGTTCTTCAAAAGAATCCGTCGTGCTTTATATGCAACTCCGACGAGATGGATTTCGACGATGCCTTGTTGGCCATTAGCGACGACGAGGAGCTTCAACTCGGACAGCTTTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCTGTCAAGGCTAACTCTGCGCTAATGAAATGTGGCGGCGGAGAGAAATGTAGCCACCACCGGAGATCGGTGTCTCCGGTGGTTTTCACGGTTGAGGAACTCAAGGCTCGTAAACGAGCGGCCGCCGGCCGTGGTGGCGCCGGTGGAAGAAGAAAGTTCGCGGCGAATTTGATGGCGATTCCTGAGTAG

mRNA sequence

ATGGGTATTTGCAGTTCTTCGGAATCTGCCGCCGTTGCCACCGCTAAGTTGATCCTTCACGACGGAAGCCTGCAGGAATTTTCGTATCCGGTTAAGGTTTCGTATGTTCTTCAAAAGAATCCGTCGTGCTTTATATGCAACTCCGACGAGATGGATTTCGACGATGCCTTGTTGGCCATTAGCGACGACGAGGAGCTTCAACTCGGACAGCTTTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCTGTCAAGGCTAACTCTGCGCTAATGAAATGTGGCGGCGGAGAGAAATGTAGCCACCACCGGAGATCGGTGTCTCCGGTGGTTTTCACGGTTGAGGAACTCAAGGCTCGTAAACGAGCGGCCGCCGGCCGTGGTGGCGCCGGTGGAAGAAGAAAGTTCGCGGCGAATTTGATGGCGATTCCTGAGTAG

Coding sequence (CDS)

ATGGGTATTTGCAGTTCTTCGGAATCTGCCGCCGTTGCCACCGCTAAGTTGATCCTTCACGACGGAAGCCTGCAGGAATTTTCGTATCCGGTTAAGGTTTCGTATGTTCTTCAAAAGAATCCGTCGTGCTTTATATGCAACTCCGACGAGATGGATTTCGACGATGCCTTGTTGGCCATTAGCGACGACGAGGAGCTTCAACTCGGACAGCTTTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCTGTCAAGGCTAACTCTGCGCTAATGAAATGTGGCGGCGGAGAGAAATGTAGCCACCACCGGAGATCGGTGTCTCCGGTGGTTTTCACGGTTGAGGAACTCAAGGCTCGTAAACGAGCGGCCGCCGGCCGTGGTGGCGCCGGTGGAAGAAGAAAGTTCGCGGCGAATTTGATGGCGATTCCTGAGTAG

Protein sequence

MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVVFTVEELKARKRAAAGRGGAGGRRKFAANLMAIPE

Homology

[Close]

BLAST of Cla001787 vs. TrEMBL
Match: A0A0A0KJB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-74
Identity = 143/154 (92.86%), Postives = 147/154 (95.45%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL AI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           +DDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC GG+KC H RRSVSPVV
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKARKRAAAGRGGAGGRRKFAANLMAIPE 155
           FTVEELK RKR AAGRGGAGGR+KFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of Cla001787 vs. TrEMBL
Match: A0A067KHU8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12291 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.3e-51
Identity = 113/167 (67.66%), Postives = 132/167 (79.04%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGIC+S ES  VATAKLIL DG LQEFSYPVKVSYVLQKNP+ FICN+DEM+FDD + AI
Sbjct: 1   MGICNSCESTHVATAKLILQDGRLQEFSYPVKVSYVLQKNPTYFICNADEMEFDDVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           +DDEELQ GQLYFALPLSRL+ PLQ EEMAALAVKA+SALMK  GG+KC   R++VSP+V
Sbjct: 61  NDDEELQPGQLYFALPLSRLRHPLQPEEMAALAVKASSALMKSNGGDKCGCGRKTVSPLV 120

Query: 121 FTVE-ELKARKRAAA-----------GRGG-AGGRRKFAANLMAIPE 155
           F+ + +LK+++R AA           G GG  GGRRKF+A L AIPE
Sbjct: 121 FSGDSDLKSKRRLAASAGSGVGGGRRGSGGVGGGRRKFSAMLSAIPE 167

[Close]

BLAST of Cla001787 vs. TrEMBL
Match: F6I223_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00140 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.0e-50
Identity = 113/164 (68.90%), Postives = 126/164 (76.83%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSS ++ +VATAKLIL DG L+EFSYPVKVSYVLQKNPSCFICNSDEMDFDD + AI
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
            DDEELQ GQLYFALPLSRLKQPLQAEEMAALAVKA+SALMK  GG+KC   R+S+SPV+
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMK-SGGDKCRCRRKSLSPVM 120

Query: 121 FTVE-ELKARKRAAAGRG---------GAGGRRKFAANLMAIPE 155
           F  E + K+  R A G G           GGRR  A  L +IPE
Sbjct: 121 FAGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Cla001787 vs. TrEMBL
Match: A5BVF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027627 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.1e-50
Identity = 113/164 (68.90%), Postives = 126/164 (76.83%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSS ++ +VATAKLIL DG L+EFSYPVKVSYVLQKNPSCFICNSDEMDFDD + AI
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
            DDEELQ GQLYFALPLSRLKQPLQAEEMAALAVKA+SALMK  GG+KC   R+S+SPV+
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMK-SGGDKCRCRRKSLSPVM 120

Query: 121 FTVE-ELKARKRAAAGRG---------GAGGRRKFAANLMAIPE 155
           F  E + K+  R A G G           GGRR  A  L +IPE
Sbjct: 121 FXGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Cla001787 vs. TrEMBL
Match: F6I227_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00180 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-49
Identity = 112/164 (68.29%), Postives = 126/164 (76.83%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSS ++ +VATAKLIL DG L+EFSYPVKVSYVLQKNPSCFICNSDEMDFDD + AI
Sbjct: 1   MGICSSCDATSVATAKLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
            DDEELQ GQLYFALPLSRLKQPLQAEEMAALAVKA+SALMK  GG+KC   R+S+SP +
Sbjct: 61  HDDEELQPGQLYFALPLSRLKQPLQAEEMAALAVKASSALMK-SGGDKCRCRRKSLSPAM 120

Query: 121 FTVE-ELKARKRAAAGRG---------GAGGRRKFAANLMAIPE 155
           F+ E + K+  R A G G           GGRR  A  L +IPE
Sbjct: 121 FSGEKDSKSSGRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163

[Close]

BLAST of Cla001787 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein)

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-47
Identity = 103/163 (63.19%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSS ES  VATAKLILHDG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ + AI
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGG---EKCSHHRRSVS 120
           S DEE QLGQLYFALPLS L   L+AEEMAALAVKA+SALM+ GG    +KC   R+ VS
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PVVFTVEELKA-----RKRAAAGRGGAG-GRRKFAANLMAIPE 155
           PV+F+   + A       R    RGG G GRRK+AA L  I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRGGGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of Cla001787 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-42
Identity = 95/147 (64.63%), Postives = 105/147 (71.43%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSSSES  VATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA+ AI
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           S DEELQLGQ+YFALPL  L+QPL+AEEMAALAVKA+SALM+ GGG      R+ V P+V
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGG---GCRRKCVEPIV 120

Query: 121 FTVEELKARKRAAAGR---GGAGGRRK 145
                 K R R  +G    G   GRRK
Sbjct: 121 SD----KLRMRVGSGDDTVGSGSGRRK 140

[Close]

BLAST of Cla001787 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein)

HSP 1 Score: 154.1 bits (388), Expect = 7.2e-38
Identity = 87/155 (56.13%), Postives = 104/155 (67.10%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MG C+S ES    TAKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+LA+
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
              E+L+ G+LYF LPL+ L  PL+A+EMAALAVKA+SAL K GGG   S++   V    
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGG-GLSYNDEDVGEC- 120

Query: 121 FTVEELKARKRAAAGRGGAG-GRRKFAANLMAIPE 155
             V  +K       G GG G GRRKF A L +I E
Sbjct: 121 -RVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of Cla001787 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 151.0 bits (380), Expect = 6.1e-37
Identity = 85/156 (54.49%), Postives = 103/156 (66.03%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MG C+S ES    +AKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA+ A+
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGG-GEKCSHHRRSVSPV 120
           + +EEL+ GQLYF LPL+ L  PL+AEEMAALAVKA+SAL K GG G        + S  
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWVSGDDDVTTSEK 120

Query: 121 VFTVEELKARK-RAAAGRGGAGGRRKFAANLMAIPE 155
            +  + +   K     GRG   G+R+F ANL  I E
Sbjct: 121 TYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of Cla001787 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18
Identity = 61/164 (37.20%), Postives = 85/164 (51.83%), Query Frame = 1


Query: 1   MGICSSSES----AAVATAKLILHDGSLQEFSYPVKVSYVLQK----------NPSCFIC 60
           MG+C S       ++  TAK++  +G L+E+  PV  S VL+           + S F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDEMDFDDALLAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGG 120
           NSD + +DD + AI  DE LQ  Q+YF LP+S+ +  L A +MAALAVKA+ A+ K  G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

Query: 121 EKCSHHRRSVSPVVFTVEELKARKRAAAGRGGAGGRRKFAANLM 151
           +        +SPVV T+ +     R AA     GG    A N+M
Sbjct: 121 KNRRRRSGRISPVV-TLNQAN-DNRIAAVNNRIGGE---ATNMM 159

[Close]

BLAST of Cla001787 vs. NCBI nr
Match: gi|449448388|ref|XP_004141948.1| (PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 4.5e-74
Identity = 143/154 (92.86%), Postives = 147/154 (95.45%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL AI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           +DDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC GG+KC H RRSVSPVV
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKARKRAAAGRGGAGGRRKFAANLMAIPE 155
           FTVEELK RKR AAGRGGAGGR+KFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of Cla001787 vs. NCBI nr
Match: gi|659079290|ref|XP_008440178.1| (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 5.8e-74
Identity = 142/154 (92.21%), Postives = 148/154 (96.10%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL AI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           +DDEELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSALMKC GG+KC H RRSVSPVV
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKARKRAAAGRGGAGGRRKFAANLMAIPE 155
           FTVEELK RKR AAGRGGAGGR+KFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of Cla001787 vs. NCBI nr
Match: gi|1009144947|ref|XP_015890068.1| (PREDICTED: uncharacterized protein LOC107424725 [Ziziphus jujuba])

HSP 1 Score: 210.7 bits (535), Expect = 1.8e-51
Identity = 111/165 (67.27%), Postives = 131/165 (79.39%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSSS+S  VATAKLIL DG L+EFSYPVKVSY+LQKNP+CFICNSDEMDFDD + A+
Sbjct: 1   MGICSSSDSTHVATAKLILQDGRLEEFSYPVKVSYILQKNPTCFICNSDEMDFDDVVRAV 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           +DD+ LQ GQLYFALPL RLK PLQAEEMAALAVKA+SALMK  G EKC + R++VSPV+
Sbjct: 61  NDDDVLQPGQLYFALPLHRLKYPLQAEEMAALAVKASSALMK-NGTEKCGYRRKAVSPVI 120

Query: 121 FTVEELKARKRAAA-----------GRGGAGGRRKFAANLMAIPE 155
           F+ E++K+ +RAAA           GR  +GG RKF A L +IPE
Sbjct: 121 FSGEDVKSTQRAAAVVGGYEGGLRSGRRRSGGGRKFTAMLNSIPE 164

[Close]

BLAST of Cla001787 vs. NCBI nr
Match: gi|694409017|ref|XP_009379157.1| (PREDICTED: uncharacterized protein LOC103967612 [Pyrus x bretschneideri])

HSP 1 Score: 209.1 bits (531), Expect = 5.3e-51
Identity = 112/159 (70.44%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGICSSS S  VATAKLIL DG+LQE+ YPVKVSYVLQKNP+CFICNSDEMDFDD L A+
Sbjct: 1   MGICSSSGSTQVATAKLILQDGNLQEYPYPVKVSYVLQKNPTCFICNSDEMDFDDVLQAV 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           SD+E LQ GQLYFALPLS LK PLQAEEMAALAVKA+SALMK  GGEKC   R SVSP++
Sbjct: 61  SDNEVLQPGQLYFALPLSWLKHPLQAEEMAALAVKASSALMK-SGGEKCGCRRNSVSPLI 120

Query: 121 FTVEELKARKRAAAGRGG-----AGGRRKFAANLMAIPE 155
           F+  E+K R+R  A  G      +GG+ +FAA L AIPE
Sbjct: 121 FSGVEVKDRRRVVASGGSRRRRDSGGKGQFAAELSAIPE 158

[Close]

BLAST of Cla001787 vs. NCBI nr
Match: gi|802641037|ref|XP_012079119.1| (PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 113/167 (67.66%), Postives = 132/167 (79.04%), Query Frame = 1


Query: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALLAI 60
           MGIC+S ES  VATAKLIL DG LQEFSYPVKVSYVLQKNP+ FICN+DEM+FDD + AI
Sbjct: 1   MGICNSCESTHVATAKLILQDGRLQEFSYPVKVSYVLQKNPTYFICNADEMEFDDVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGEKCSHHRRSVSPVV 120
           +DDEELQ GQLYFALPLSRL+ PLQ EEMAALAVKA+SALMK  GG+KC   R++VSP+V
Sbjct: 61  NDDEELQPGQLYFALPLSRLRHPLQPEEMAALAVKASSALMKSNGGDKCGCGRKTVSPLV 120

Query: 121 FTVE-ELKARKRAAA-----------GRGG-AGGRRKFAANLMAIPE 155
           F+ + +LK+++R AA           G GG  GGRRKF+A L AIPE
Sbjct: 121 FSGDSDLKSKRRLAASAGSGVGGGRRGSGGVGGGRRKFSAMLSAIPE 167

The following BLAST results are available for this feature:

BLAST of Cla001787 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJB4_CUCSA	3.1e-74	92.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1	[more]
A0A067KHU8_JATCU	8.3e-51	67.66	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12291 PE=4 SV=1	[more]
F6I223_VITVI	7.0e-50	68.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00140 PE=4 SV=...	[more]
A5BVF1_VITVI	9.1e-50	68.90	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027627 PE=4 SV=1	[more]
F6I227_VITVI	1.6e-49	68.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00180 PE=4 SV=...	[more]

BLAST of Cla001787 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23690.1	1.0e-47	63.19	unknown protein	[more]
AT4G37240.1	1.6e-42	64.63	unknown protein	[more]
AT3G50800.1	7.2e-38	56.13	unknown protein	[more]
AT5G66580.1	6.1e-37	54.49	unknown protein	[more]
AT1G76600.1	2.8e-18	37.20	unknown protein	[more]

BLAST of Cla001787 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448388\|ref\|XP_004141948.1\|	4.5e-74	92.86	PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus]	[more]
gi\|659079290\|ref\|XP_008440178.1\|	5.8e-74	92.21	PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]	[more]
gi\|1009144947\|ref\|XP_015890068.1\|	1.8e-51	67.27	PREDICTED: uncharacterized protein LOC107424725 [Ziziphus jujuba]	[more]
gi\|694409017\|ref\|XP_009379157.1\|	5.3e-51	70.44	PREDICTED: uncharacterized protein LOC103967612 [Pyrus x bretschneideri]	[more]
gi\|802641037\|ref\|XP_012079119.1\|	1.2e-50	67.66	PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU44970	watermelon EST collection version 2.0	transcribed_cluster
WMU72039	watermelon EST collection version 2.0	transcribed_cluster
WMU73102	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001787	Cla001787.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU73102	WMU73102	transcribed_cluster
WMU72039	WMU72039	transcribed_cluster
WMU44970	WMU44970	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..128 score: 1.9
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 4..154 score: 1.7
None	No IPR available	PANTHER	PTHR33052:SF17	SUBFAMILY NOT NAMED	coord: 4..154 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001787	Cla97C01G015350	Watermelon (97103) v2	wmwmbB234
Cla001787	Cla97C09G179290	Watermelon (97103) v2	wmwmbB284
Cla001787	Csa6G488320	Cucumber (Chinese Long) v2	cuwmB500
Cla001787	Csa2G239380	Cucumber (Chinese Long) v2	cuwmB139
Cla001787	MELO3C007505	Melon (DHL92) v3.5.1	mewmB570
Cla001787	ClCG01G016340	Watermelon (Charleston Gray)	wcgwmB141
Cla001787	ClCG09G017880	Watermelon (Charleston Gray)	wcgwmB033
Cla001787	CSPI06G27510	Wild cucumber (PI 183967)	cpiwmB519
Cla001787	Cucsa.101880	Cucumber (Gy14) v1	cgywmB136
Cla001787	CmaCh03G010230	Cucurbita maxima (Rimu)	cmawmB632
Cla001787	CmaCh07G007400	Cucurbita maxima (Rimu)	cmawmB826
Cla001787	CmoCh03G010260	Cucurbita moschata (Rifu)	cmowmB623
Cla001787	CmoCh07G007610	Cucurbita moschata (Rifu)	cmowmB816
Cla001787	Lsi10G003440	Bottle gourd (USVL1VR-Ls)	lsiwmB062
Cla001787	Lsi01G010390	Bottle gourd (USVL1VR-Ls)	lsiwmB144
Cla001787	Cp4.1LG10g02820	Cucurbita pepo (Zucchini)	cpewmB073
Cla001787	Cp4.1LG19g11450	Cucurbita pepo (Zucchini)	cpewmB482
Cla001787	CsGy6G026870	Cucumber (Gy14) v2	cgybwmB468
Cla001787	CsGy2G012010	Cucumber (Gy14) v2	cgybwmB132
Cla001787	MELO3C007505.2	Melon (DHL92) v3.6.1	medwmB559
Cla001787	Carg05248	Silver-seed gourd	carwmB0805
Cla001787	Carg00881	Silver-seed gourd	carwmB0407
Cla001787	CsaV3_2G014500	Cucumber (Chinese Long) v3	cucwmB152
Cla001787	CsaV3_6G042660	Cucumber (Chinese Long) v3	cucwmB526
Cla001787	Bhi03G001507	Wax gourd	wgowmB434

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla001787	Cla010301	Watermelon (97103) v1	wmwmB025

The following block(s) are covering this gene:

None