CmoCh03G010260 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGCCGGCTAATCTGGATGAACAAGATCAGGGTGCAGCAGCGTACCCATTTCCATACCCTTTCCGATCTTTCGTCTTCCGAGAATCCATTTTCTTTTCCCAGCCCGACAAACAAACCCACCCAACCCAATTCCGTTTCTCGATTTCAAGGTCTTCAAACCCAATTTCAGTACAGATTTTGTTAGTCCCCACCATTTCTGAGTGATGGTTTTACGATCGAGGAGTGTGGCTGTGGCGTAGAATAGTCGCAGAGGAAAATGGAAGAGCTTCCGGGGGCATTGGGCACAAGCGCAAGCTTGGCACTCCGTCTTGGTCAGGCGATCTTTGCCTCGGCCTCCCTCGTCTTCATGTGTCTCGAAATCGAGTTCTATAGCTATACGGCTTTCTGGTAATCACAATTTCTTTCTTCCTACTTTCTCCTATTTGGTTGTTTTTGTTCTCGTTTTCTGATCACGACTGGATCAATAGTCCTTACATCGGCTTAATCTTGTAATAACTTTTTGTAAGTAGCAAGTTGTGTTAGCTTCATAGCCTAACTAGAATTTCAATATATGCATTTTGTAAATTAGTGTATCAAATGTTTGATTACTGCCTATACAAACTCTGTCTTGGGGATTGATCAATGAATTATAGACAACCATGTGTTTTCCCCCAAGTTATGGATTTAGATACTTCTGAACTGATAGTGGCAACCTATTTAAGAAATAACCCATGTGGGTGTGGATATTAGATTGCTCATCCATTTTATGTAGCATTTCTTTTCCCTGGCTATCTTTGACAGGGTAATATGTATTATACTACTGAAATCATTTCAAACTAGATAGGTTACAATTTACAGAATGGTTTGGATGTTTGTAATATGATGAACTGCAATGGAATAATTCTCTGATCAAACAAAGTTTTCTGATATAGATAGATGAACATGGTCGAGAATTCTTGTTTGCAAGTTGTTTGGAGAAAATTTCTTGTTTGCATCCACTTCTTAGGTGTTCTTATGACTGGATGCAACTGTTTGAACATGAAGTTTAATATGTTTGGAGAGTTAATTAGAATTGCATCTTAGGAGGGAGGGAGTTCTGAAAGATGCTCATCCAGGAGAGCATAAATGATGAAAACTTGAGCTAATTTTCTGGTTTTTTTTTCTTCTTTTTTCCCTGATCATACATACATACACCTGCGAAAAATATATTGTTGAAATATCATCACTAGCCCAATAGAGTCAAGCCCAATAATTGTACTAGCCCAATAGAGTCAAGCCTAATTGTACGAGCCCAGTATATTTATTTTAGTAGAGATTTTAGGAGAAAGAGATGTAGATATTTTAGGAGAAAGATTCAATTTGTTAGGTCTAGATTCAAATCGGTTAGGTCTAGATTTAGATTGGTTAAATATAGATTGTTTACTCTTAGTATAAATACCCCCACCCTACCTAGGTTATTCATCCAAGAAATCTAAAAACAATAAAAAGCAGAAGTATTCTACAGAGTGTCTTGTATTCTCTTCTCGATTGGTCTTAATAAAGAGAGCGAGTGTTTCCCACAGTGAGTTGTGTTCAACATATATGAAGATCCAAAATCTGAAGGAAACTTTGTGATTGCTCATGTTGATTCCCCCAGCTATCTGGTGACAGTCATGGGTTTGATGGTTCCTTGGAGTTTGACATTGGCAGTCGTAGATGGCTATTCTGTTTTTGTTAGGCATTTACCTCCTCAAACACGAGTAACGTCGATCATCGTCACCGGAGATTGGGTACGGGAAATATCGTCTAGGAAACAAAATATAACATCTTTGTTCTTTGTTGTTTCTCCTTCTGATATCAAAATGAAGGGAAAAACATTTAACACACTTTGTATGTTATGTCATAGGTTCTATCATTTCTGTCTTTGGGTGCTGCTTGCTCGACAGCCAGTGTCGCCGATATCTTGCTCGAAGCCGGGATTTCGTATTGCTCAGCAAAGCTTTGCAATAGATATCGGCTTTCTGCAGTAATGGCATTCTTGTCTTGGTTTCTTTCTCTTGTTTCTTCACTCTTCAATCTCTGGCTTCTTCCATCTTTATAGAGTTTTTCTTCTTAAANAAGAACTGTATATGAAAAAAAAAAAAAAAAAAAAAAAACTGTGAATTATAGGTTCTGATTTTCTTTATTCACTCTGTTGCATAAATTTGTCCAATTCTTCAAAATTGGATTGGACAGTTGTAAAAAAAAATTAATCCAATAATCATAAGTGTTCTGTGAGTATTGAAGATAAATTATTTATGTTATTGTCCTAGATATTTGTTCGCTTTGATGTGTTATGTGCCATTGCTAGTCTCACGATTTTGATTTTAAAACGCGTTTAATAGAGAGGATTTCACACACAATCTGAAGAAAGATAACATTAGATTATTAAACGAAATCTGGTATAAAAATAAGATCAAATAATTAAATAGAATATTAAAAATGGATGAGATTTAAAAAGCAAAATAATAATGAATGTGAGGCATGTGGAAATTAGATTAGTTAGATTAGATTAGATTAGCATTGGCTGCTCTGTACAAGGAAAAGAAAAAGAGACAAAGAAAACTCTGGAAAATGGGACAGTGCTGTCCTTAAAATGTTCATTGAACTCCATAACTTATGGGAATGTCTTTATTATTAGGTACTTTGTATTCGACTCCGACGGTGGTCGCTGCTCTTTTGTGGGACACCCCCTCCCCCAAACTACGCCTTCTTTAATCAAATAAGTAACTTTTCTTTGAAGGCTCTGCGCCGGCGGACATAGCATTGCGGCGGCGGCGGCGGCGGCACGGTCTGGTCCTGGCTAGTCGTGGTCTGTCTGGCCGGAGATGGAAGGTAGGGGAGGGGAGAAGGGAAAGTGGAAATGCCAAAATAAAATATATTATATTTAACCAAATCGATTAAAAATTCCACGTCAGTCAGGTCAAATATATTAAAATATCATTTTAAAATATTTCGAAATAAAAAATAATGGATGTGAAATGACATTTGTAGACTTCGAAAACTAAAACAAAATTCTTATTCTGCACAACTGAACCAATAATAATTAAAATAAATCTAGACTAAAATAGAATTTTAACCGTTACCTTTTTAACTAAAACGTTGATTTTTTACGGCGAAAAAATGAATAATTGACATCGGTTAGGTAATAAATATAATGAGTAGGGTCATTATTGGAAGTACACAATGCAAATCCCATCCAACCTGTCACGACCAACTCCCAGCCTGGCAGTCCCCACTATTAATTAAAGAAAAAAAAAAACGGGGGCCCACATTACTGTTTGACCAGTCCTACGTGGTGCACGCAGTTTAAAAACCGTGAGCCCCACCTTCCCTATATAAATACAATCAGCGTTCCCAATCCCTAGCGCCTCCCAAATCCCCTGGTTGTCGCAGTCTCCTCTCTCCGCCGCGACGCGCCGCCGTTAATGGGTATTTGCAGTTCATCGGAATCTACTTCAGTGGCCACCGCCAGACTGATCCTTCACGACGGAAGCTTGCAGGAATTTTCTTATCCAATCAAGGTTTCGTACGTTCTTCAAAAGAATCCGTCGTGCTTTATATGCAACTCCGACGATATGGATTTCGATGACGCCTTGTTAGCCATTGGCGACGACGAAGAGCTTCAACTCGGACAGCTCTATTTTGCACTGCCATTGAGTAGGCTGAAGCAGCCGCTTCAGCCCCAGGAAATGGCCGCATTGGCCGTCAAGGCCAGCGCTGCACTCATGAAACGTGGCGCAGGAGACAAATATGGCAACCGCCGGAGATCAGTGTCTCCGGTGGTTTTCACGGCTAAGGAACTCAAGAGTCGCAAACGAGTAGTCGCCGGCCGTGGAAGAAAAAAATTCGCGGCGAATTTGACGGCGATTCCTGAGTAG AAAGCCGGCTAATCTGGATGAACAAGATCAGGGTGCAGCAGCGTACCCATTTCCATACCCTTTCCGATCTTTCGTCTTCCGAGAATCCATTTTCTTTTCCCAGCCCGACAAACAAACCCACCCAACCCAATTCCGTTTCTCGATTTCAAGGTCTTCAAACCCAATTTCAGTACAGATTTTGTTAGTCCCCACCATTTCTGAGTGATGGTTTTACGATCGAGGAGTGTGGCTGTGGCGTAGAATAGTCGCAGAGGAAAATGGAAGAGCTTCCGGGGGCATTGGGCACAAGCGCAAGCTTGGCACTCCGTCTTGGTCAGGCGATCTTTGCCTCGGCCTCCCTCGTCTTCATGTGTCTCGAAATCGAGTTCTATAGCTATACGGCTTTCTGCTATCTGGTGACAGTCATGGGTTTGATGGTTCCTTGGAGTTTGACATTGGCAGTCGTAGATGGCTATTCTGTTTTTGTTAGGCATTTACCTCCTCAAACACGAGTAACGTCGATCATCGTCACCGGAGATTGGGTTCTATCATTTCTGTCTTTGGGTGCTGCTTGCTCGACAGCCAGTGTCGCCGATATCTTGCTCGAAGCCGGGATTTCGTATTGCTCAGCAAAGCTTTGCAATAGATATCGGCTTTCTGCAGTAATGGCATTCTTGTCTTGGCTCTGCGCCGGCGGACATAGCATTGCGGCGGCGGCGGCGGCGGCACGGTCTGTCTCCTCTCTCCGCCGCGACGCGCCGCCGTTAATGGGTATTTGCAGTTCATCGGAATCTACTTCAGTGGCCACCGCCAGACTGATCCTTCACGACGGAAGCTTGCAGGAATTTTCTTATCCAATCAAGGTTTCGTACGTTCTTCAAAAGAATCCGTCGTGCTTTATATGCAACTCCGACGATATGGATTTCGATGACGCCTTGTTAGCCATTGGCGACGACGAAGAGCTTCAACTCGGACAGCTCTATTTTGCACTGCCATTGAGTAGGCTGAAGCAGCCGCTTCAGCCCCAGGAAATGGCCGCATTGGCCGTCAAGGCCAGCGCTGCACTCATGAAACGTGGCGCAGGAGACAAATATGGCAACCGCCGGAGATCAGTGTCTCCGGTGGTTTTCACGGCTAAGGAACTCAAGAGTCGCAAACGAGTAGTCGCCGGCCGTGGAAGAAAAAAATTCGCGGCGAATTTGACGGCGATTCCTGAGTAG ATGGAAGAGCTTCCGGGGGCATTGGGCACAAGCGCAAGCTTGGCACTCCGTCTTGGTCAGGCGATCTTTGCCTCGGCCTCCCTCGTCTTCATGTGTCTCGAAATCGAGTTCTATAGCTATACGGCTTTCTGCTATCTGGTGACAGTCATGGGTTTGATGGTTCCTTGGAGTTTGACATTGGCAGTCGTAGATGGCTATTCTGTTTTTGTTAGGCATTTACCTCCTCAAACACGAGTAACGTCGATCATCGTCACCGGAGATTGGGTTCTATCATTTCTGTCTTTGGGTGCTGCTTGCTCGACAGCCAGTGTCGCCGATATCTTGCTCGAAGCCGGGATTTCGTATTGCTCAGCAAAGCTTTGCAATAGATATCGGCTTTCTGCAGTAATGGCATTCTTGTCTTGGCTCTGCGCCGGCGGACATAGCATTGCGGCGGCGGCGGCGGCGGCACGGTCTGTCTCCTCTCTCCGCCGCGACGCGCCGCCGTTAATGGGTATTTGCAGTTCATCGGAATCTACTTCAGTGGCCACCGCCAGACTGATCCTTCACGACGGAAGCTTGCAGGAATTTTCTTATCCAATCAAGGTTTCGTACGTTCTTCAAAAGAATCCGTCGTGCTTTATATGCAACTCCGACGATATGGATTTCGATGACGCCTTGTTAGCCATTGGCGACGACGAAGAGCTTCAACTCGGACAGCTCTATTTTGCACTGCCATTGAGTAGGCTGAAGCAGCCGCTTCAGCCCCAGGAAATGGCCGCATTGGCCGTCAAGGCCAGCGCTGCACTCATGAAACGTGGCGCAGGAGACAAATATGGCAACCGCCGGAGATCAGTGTCTCCGGTGGTTTTCACGGCTAAGGAACTCAAGAGTCGCAAACGAGTAGTCGCCGGCCGTGGAAGAAAAAAATTCGCGGCGAATTTGACGGCGATTCCTGAGTAG
BLAST of CmoCh03G010260 vs. Swiss-Prot
Match: CSPLN_ARALL (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485429 PE=3 SV=2) HSP 1 Score: 151.8 bits (382), Expect = 1.3e-35 Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 1
BLAST of CmoCh03G010260 vs. Swiss-Prot
Match: CSPLH_ARATH (CASP-like protein 5C2 OS=Arabidopsis thaliana GN=At3g50810 PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.9e-35 Identity = 73/135 (54.07%), Postives = 96/135 (71.11%), Query Frame = 1
BLAST of CmoCh03G010260 vs. Swiss-Prot
Match: CSPLT_ARATH (CASP-like protein 5C1 OS=Arabidopsis thaliana GN=At4g37235 PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.4e-35 Identity = 81/136 (59.56%), Postives = 103/136 (75.74%), Query Frame = 1
BLAST of CmoCh03G010260 vs. Swiss-Prot
Match: CSPLU_ORYSJ (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica GN=Os03g0767900 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.4e-34 Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 1
BLAST of CmoCh03G010260 vs. Swiss-Prot
Match: CSPLU_ORYSI (CASP-like protein 5C1 OS=Oryza sativa subsp. indica GN=OsI_38237 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.6e-33 Identity = 75/138 (54.35%), Postives = 103/138 (74.64%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TrEMBL
Match: A0A0A0KG19_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_6G488330 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63 Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TrEMBL
Match: A0A0A0KJB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G488320 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 5.6e-62 Identity = 129/154 (83.77%), Postives = 140/154 (90.91%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TrEMBL
Match: A0A067K6V0_JATCU (CASP-like protein OS=Jatropha curcas GN=JCGZ_12293 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 9.2e-49 Identity = 104/143 (72.73%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TrEMBL
Match: A0A067KHU8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12291 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47 Identity = 107/167 (64.07%), Postives = 129/167 (77.25%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TrEMBL
Match: W9RUP2_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_011741 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 5.0e-47 Identity = 101/140 (72.14%), Postives = 116/140 (82.86%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein) HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43 Identity = 96/163 (58.90%), Postives = 116/163 (71.17%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein) HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39 Identity = 89/143 (62.24%), Postives = 106/143 (74.13%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TAIR10
Match: AT3G50810.1 (AT3G50810.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 149.8 bits (377), Expect = 2.7e-36 Identity = 73/135 (54.07%), Postives = 96/135 (71.11%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TAIR10
Match: AT4G37235.1 (AT4G37235.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 149.4 bits (376), Expect = 3.6e-36 Identity = 81/136 (59.56%), Postives = 103/136 (75.74%), Query Frame = 1
BLAST of CmoCh03G010260 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein) HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32 Identity = 80/152 (52.63%), Postives = 99/152 (65.13%), Query Frame = 1
BLAST of CmoCh03G010260 vs. NCBI nr
Match: gi|449448386|ref|XP_004141947.1| (PREDICTED: CASP-like protein ARALYDRAFT_485429 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63 Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of CmoCh03G010260 vs. NCBI nr
Match: gi|449448388|ref|XP_004141948.1| (PREDICTED: uncharacterized protein LOC101203564 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 8.0e-62 Identity = 129/154 (83.77%), Postives = 140/154 (90.91%), Query Frame = 1
BLAST of CmoCh03G010260 vs. NCBI nr
Match: gi|659079290|ref|XP_008440178.1| (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60 Identity = 126/154 (81.82%), Postives = 139/154 (90.26%), Query Frame = 1
BLAST of CmoCh03G010260 vs. NCBI nr
Match: gi|1009144974|ref|XP_015890083.1| (PREDICTED: CASP-like protein ARALYDRAFT_485429 [Ziziphus jujuba]) HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50 Identity = 104/143 (72.73%), Postives = 124/143 (86.71%), Query Frame = 1
BLAST of CmoCh03G010260 vs. NCBI nr
Match: gi|802641046|ref|XP_012079121.1| (PREDICTED: CASP-like protein 5C1 [Jatropha curcas]) HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48 Identity = 104/143 (72.73%), Postives = 121/143 (84.62%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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