Lsi10G009140 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTTCATGATTTCTAGATATCTCCTGAAAATGTGACTTAACTTAGCATGCCTAGTTTTCATTCTTGCTCTTTGTTTCTGTGCTTCAGGCCTAATTTTCATTTCTCCTACCACATTTCTGGAGTATGTCGGTTCCCATTTCGTGCTAGTTCAATCGTCCCCCACGTAGAAGATTCCATGCCACACCTCTGCCCTCAAGCCTCGCTTCAGTCTTCTACTTCTTTTTCTGAAAATAGTGTGGTTGAAGAGAGGAATTCTATTGCAGTTTCTTCCATTGAAACAACACCAAAGGTCGACAAGAGCGGCAAATTTTGTAGCCCCAGAGCTGCTAGAGAGCTCGCTTTGTAAGATCCACCATTTCATTTTCACTTTTTTTTCCCCCCTAAACATCTGAATATCTCCTCTCTACCTTTTTACCTATTCACAAAGTTGGCCCACTCACCAAGAATATACTCTCAGAATTTGTTTAATTTCTAGACTTGTAATCAATTCTAATTCTACTAGATTATTCAGTCACAAGTCAACTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCCGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGACGGGGTAAAAAAGATTTTGTTGGGGAAATAGATGTCACATATTTAACTCAAATATAAAACCAACGTCTTGCTTTATTTGTCTGTACAATTCAAAATCGGGATATGAATTTGACAAGACATCATTGATGGAATATAATCATATGAGCTTTGGAGGCCCGCCAGTTACTGTGGAAATAGTTGAAGAAGCAGATGAGCTTTTACGTAAAGATGAAAAAGATTCTACAATTGGTAAACAATTACGTGACCTTCGTATATATATTATTTCTTCTTCTTAATTCACTCATTACTTTAGAATTGAGCCCCGAAAGAGACAAAACTATTCATCGAAAAGATGAACCTCTCACTAATGCTCAAAGGATACAAACTCCTAAAAGAGTAAAAAGGAAAAAGAAAAGCAAAGAAATATAAAGATTCCACAAACCATAACAAATGATATACTTAAAAAACTTAACAAAAAACTAATACATTAACATCAAGCATGGGTATGAACGTGGAGTTGCCCATAGAAGTTGGAGCAGATGTCCAAAAGCTCCAACAAGTGTTGTTGCAAAATCGCAATCTTCTGTTTGGGTAACTTTATTTGGCAAAGAAGCTTCTCCTTCGAAATTTAAACCAATTCTTCATCAAGATGAGCTATAATAAAACTCAAAGAGAGCCCTTGAAGATAAAATTCTCACATCCTCGAAAGAGATATAGAGAGAGAGGAGAAATGCCAAAAAAACTCTTGAACTTCCAAAAAAAAAAAAAAAGGGCAGTATCTAATGAAAGGATCAAGAGGACTACTAGTTCCAAGGCTCCCAAATGTCACTATGGATCAATGCACAAGGGTTGGAAGATTTGAATAAATTTCTGGTATGTTTGGAGAGTTGACACATTTTGCACAGAAACTGACTAGATTTTTTTTATTAATGAATAACCGAGGAAACAATTTTTTCAGGATACGAAAAATTTGGACGATCAAGTCGAAAGTGCCATAACATGACTTTGCTTTAACAAGACAGTGATTTAGAACTGGAAGTAGACTCGGGAATAAGACTGCTAGAATTGAAAGAAGACTCACAACTAAGACTGGAAGACGATTTTGAAGGATTAACTGCAAATTTGACGAAGGAACCAAGGGTTCTACCAAAAGCAAAATTCAGAGGCTAAAATGTAACATTTGAAAATTTAGAGACCAAAATGCAACCGAACCCAAAACTGAGGGACTAAAATTATATTTTTCCCATGTTTTTATTATAGTTGTAAATGTAGTATTGTCTAGCCCCAGAGTCCGATTTTATTGCATTTAGTATTAAAGTTATGTTTTTCTGCATGACCATATCTCAGAGGCAGAAATCCTCGCAGCCCCACCAAAGCTTGTCTACAGCAAACTGATCTTACGGTAAATGTGGTTTATATTCCCCTGCCTTTGGCAGAGGAAGATAAGATGAAAATTTAGTATGAATTTCATGTATTTTATCAATGTTATTTACTTCACGCATGAAATAAGGTCAGCCATTGTCTTCATGGTTTTCAGGTTTACACGAAAACTTTTGGTTGCAGTTGTGGACGGATGGGACAGTCGTGTGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGGTCGTGTAGAAAGCTTGTTTCTTTTTGCTATTTTATTTTCTGATTTTCTCCTTTTCTAGTTGGGAATAATGTTGAACCATTTATCATGTTCGTGTGGTTATAATACTCCTCGTGAACTGATCTTTGCCTCATAATCATAGCATGTGTGTGCTTTTTACAAGACTTATAGAAATTTGAAAAGCTTTATACTATGGTGGCCACTGGTGAGGATGGAACCACAAACATATGTGCAATATTTTAACCATGGATATTGTTGAATTTCTTATGTGTGTCTCTGAGCTTTAGTTATTGAAGGTTTGAGCTTAGCGGTAAATGCTCTTGGACTCAACAAACAGTTAGGAGGTATTTGGCCCAACGAGTTGAGGGAACTGGAGTTGTGAGCTCCACTCCTTGTTTGGCCTAAGGAGTTGGTGAATCCCACTACTAAAAAACGTCAATTTTATACTTTATTAACTCCTTACACTGTGGGCCTCAGGAGTATAGCCCCCCATACTCCATAACTCTATGGAGTTCACAATTCCACTCATTGTTCCAAACGCCTCCTTAATGGTTTCAAAATTATATGGTCGTCCAAGTTTGAACCTAGCAAATATTAAGCTATTGAAGTTTTTATGGGGGTTAAAACAAAACCTTTAGCCTTCAGAACATGAATTTCGTCAAATAGTCATCTAGATATGCAACTAGGTTAAGTACTAAATAAATGTATTGTCATTCTATCAGATTTTCTTTTATGAAAAAATATACTTTTTAATAACCAAAGTAGTTGAAGCTTACAGTGTCTGTTTAATTCATATGCTCTTAACAGTTGTGAACCTAAATTTGAATGATGTTATTTTTTGTTTGAATTCAATGAGGAAATCAAACCATCTAATCTTTGAAATGATTATTGATGGATTACCTATTGAGCTATATTTGGATTGACATGTTTTGTTAATCTATTAGATAAATCATTCCAGCCTTTATGTTACTTATTATTCAGACATTACAGTTGCACAAATCCAAAACAAAGATCATATGCTTGGACTTGAACTTATTCAGCCTTTATGTTACTTATTATTAAATATCTCATGCATTCGTATATATTTCAGAACAAGCCAGTAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGACATCAAATTGTCATTAATGAGGTAAATGTGTCTTGA ATGGGCTTCATGATTTCTAGATATCTCCTGAAAATGCCTAATTTTCATTTCTCCTACCACATTTCTGGAGTATGTCGGTTCCCATTTCGTGCTAGTTCAATCGTCCCCCACGTAGAAGATTCCATGCCACACCTCTGCCCTCAAGCCTCGCTTCAGTCTTCTACTTCTTTTTCTGAAAATAGTGTGGTTGAAGAGAGGAATTCTATTGCAGTTTCTTCCATTGAAACAACACCAAAGGTCGACAAGAGCGGCAAATTTTGTAGCCCCAGAGCTGCTAGAGAGCTCGCTTTACTTGTAATCAATTCTAATTCTACTAGATTATTCAGTCACAAGTCAACTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCCGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGACGGGTTACTGTGGAAATAGTTGAAGAAGCAGATGAGCTTTTACGTAAAGATGAAAAAGATTCTACAATTGGATACGAAAAATTTGGACGATCAAGTCGAAAAGGCAGAAATCCTCGCAGCCCCACCAAAGCTTGTCTACAGCAAACTGATCTTACGCATGTGTGTGCTTTTTACAAGACTTATAGAAATTTGAAAAGCTTTATACTATGGTGGCCACTGAACAAGCCAGTAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGACATCAAATTGTCATTAATGAGGTAAATGTGTCTTGA ATGGGCTTCATGATTTCTAGATATCTCCTGAAAATGCCTAATTTTCATTTCTCCTACCACATTTCTGGAGTATGTCGGTTCCCATTTCGTGCTAGTTCAATCGTCCCCCACGTAGAAGATTCCATGCCACACCTCTGCCCTCAAGCCTCGCTTCAGTCTTCTACTTCTTTTTCTGAAAATAGTGTGGTTGAAGAGAGGAATTCTATTGCAGTTTCTTCCATTGAAACAACACCAAAGGTCGACAAGAGCGGCAAATTTTGTAGCCCCAGAGCTGCTAGAGAGCTCGCTTTACTTGTAATCAATTCTAATTCTACTAGATTATTCAGTCACAAGTCAACTGTTTATGCAGCTTGTTTAGAAGGCTCTGATCCCGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGACGGGTTACTGTGGAAATAGTTGAAGAAGCAGATGAGCTTTTACGTAAAGATGAAAAAGATTCTACAATTGGATACGAAAAATTTGGACGATCAAGTCGAAAAGGCAGAAATCCTCGCAGCCCCACCAAAGCTTGTCTACAGCAAACTGATCTTACGCATGTGTGTGCTTTTTACAAGACTTATAGAAATTTGAAAAGCTTTATACTATGGTGGCCACTGAACAAGCCAGTAGGACGGATTCTAGAGCTTTGTATTCTCCACCTGGCCATGTCTGAAATAACGGTTATTGGAACAAGACATCAAATTGTCATTAATGAGGTAAATGTGTCTTGA MGFMISRYLLKMPNFHFSYHISGVCRFPFRASSIVPHVEDSMPHLCPQASLQSSTSFSENSVVEERNSIAVSSIETTPKVDKSGKFCSPRAARELALLVINSNSTRLFSHKSTVYAACLEGSDPVRLFEKRLNARRVTVEIVEEADELLRKDEKDSTIGYEKFGRSSRKGRNPRSPTKACLQQTDLTHVCAFYKTYRNLKSFILWWPLNKPVGRILELCILHLAMSEITVIGTRHQIVINEVNVS
BLAST of Lsi10G009140 vs. TrEMBL
Match: A0A0A0KWZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268020 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 7.4e-62 Identity = 151/260 (58.08%), Postives = 165/260 (63.46%), Query Frame = 1
BLAST of Lsi10G009140 vs. TrEMBL
Match: W9RK01_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005067 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 5.5e-33 Identity = 116/272 (42.65%), Postives = 138/272 (50.74%), Query Frame = 1
BLAST of Lsi10G009140 vs. TrEMBL
Match: A0A067EKS2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021860mg PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32 Identity = 105/232 (45.26%), Postives = 126/232 (54.31%), Query Frame = 1
BLAST of Lsi10G009140 vs. TrEMBL
Match: M5WJ39_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009156mg PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30 Identity = 108/225 (48.00%), Postives = 125/225 (55.56%), Query Frame = 1
BLAST of Lsi10G009140 vs. TrEMBL
Match: A0A067ETF9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021860mg PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30 Identity = 105/236 (44.49%), Postives = 127/236 (53.81%), Query Frame = 1
BLAST of Lsi10G009140 vs. TAIR10
Match: AT4G26370.1 (AT4G26370.1 antitermination NusB domain-containing protein) HSP 1 Score: 107.8 bits (268), Expect = 9.4e-24 Identity = 83/193 (43.01%), Postives = 99/193 (51.30%), Query Frame = 1
BLAST of Lsi10G009140 vs. NCBI nr
Match: gi|700198860|gb|KGN54018.1| (hypothetical protein Csa_4G268020 [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61 Identity = 151/260 (58.08%), Postives = 165/260 (63.46%), Query Frame = 1
BLAST of Lsi10G009140 vs. NCBI nr
Match: gi|778692749|ref|XP_004149639.2| (PREDICTED: uncharacterized protein LOC101216754 [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61 Identity = 151/260 (58.08%), Postives = 165/260 (63.46%), Query Frame = 1
BLAST of Lsi10G009140 vs. NCBI nr
Match: gi|659097953|ref|XP_008449897.1| (PREDICTED: uncharacterized protein LOC103491638 [Cucumis melo]) HSP 1 Score: 241.1 bits (614), Expect = 2.0e-60 Identity = 151/258 (58.53%), Postives = 166/258 (64.34%), Query Frame = 1
BLAST of Lsi10G009140 vs. NCBI nr
Match: gi|703124582|ref|XP_010103088.1| (hypothetical protein L484_005067 [Morus notabilis]) HSP 1 Score: 149.4 bits (376), Expect = 8.0e-33 Identity = 116/272 (42.65%), Postives = 138/272 (50.74%), Query Frame = 1
BLAST of Lsi10G009140 vs. NCBI nr
Match: gi|641835535|gb|KDO54510.1| (hypothetical protein CISIN_1g021860mg [Citrus sinensis]) HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31 Identity = 105/232 (45.26%), Postives = 126/232 (54.31%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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