Lsi11G016260 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G016260
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionChromosome 3B, genomic scaffold, cultivar Chinese Spring
Locationchr11 : 24613189 .. 24614861 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGGTATATTAGCGGTTTCATGTTGGATTAGTTCCGCATAAGAATGTAATTGAACCAAACATTTTGGCAATTAGATGTTTCCGGAGTTGTGGACGTATATAATGGCTTTATCTTTGTGATCAATTTCGGTACAATTTACATTTTTGCTTTCTGAGTTGCTACAAATTGTTTCAAAATTGGAGAAATTTTGATATACCTATCGCTGTTAGTTGGTCGATGCCTTCGATTATTGGGCCAATCTATGGTAATTACGAACTAGTTACTTCTATTCGTTTCTTTGTTACACTTAGTATGTAAAGACTAAAGAGCGAGTGTGTTATGCTTGCATTAACAGGAGATATATTGTTTGCTTTTGCATCACCTGCATCAGATGTATTTTTCATATTGCAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTGTATGCATCGGATAATCTATTGAATTTCAAATAAATCAATGTTACCAACTTAGTATTTGATGGTCACTAATATTTTTGACATCGTTGTTATCCATTATATTTGAAATAAAAATAAAAATGTTTGTAGTTTATATCTATTTGGCCATCTCTGTTCTTCTTGAGAGGTTTAGTTCACAATCCATCTGCCCTTTCTTCCAACTGAAGTTTGCATTTACTGAGACTTGAGAGGTTCTCCTTGGTTCAACAGTTTACTTAGACTTGAGAAGTTTGCATTTAATGAATGTTTTGTTGTAATTGTGTCTCTAATCATGCTGTTGATAGTTCCTTTTGTTTTCGTATGTTATCAAAGTTTTATCTGGACAATATTTTTGTGAAATATAATTTTGCTGGCATTTGGGTTTAGTGATAGTTGTATAAGACATTTTGCTGTATTTCTCTTGTAATAATGCTTTTTGGATTTCATGCATACTACTAAACTAACAACTTCTATTCCTCTTTCTCACTTTCACTTTTATCATCCTACTCAGTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

mRNA sequence

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Coding sequence (CDS)

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Protein sequence

MCEIKPEEKGILRCRPTDLSTAIPAAALVRVTASSRPPLLFLTPSPNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
Homology
[Close]
BLAST of Lsi11G016260 vs. TrEMBL
Match: A5AM71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 126 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 185

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 186 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 245

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 246 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]
BLAST of Lsi11G016260 vs. TrEMBL
Match: E0CU37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]
BLAST of Lsi11G016260 vs. TrEMBL
Match: M5XB29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1 

Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD--ETNN 160
           QQ G+ N Q  R QNV + +  +G  + DEFK+GFPS GL + SNKWWGS+  D  E+  
Sbjct: 14  QQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 GE-----DDKHH--FKVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVERG 220
           GE     +DK H   K+ +DG  S ++D+EK ES +E+     QGT LL A+RK S+E G
Sbjct: 74  GEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLLMAVRKGSLEEG 133

Query: 221 RKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
           +K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 QKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]
BLAST of Lsi11G016260 vs. TrEMBL
Match: A9PJK4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-22
Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1 

Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R   + +    +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHIMLTPGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLD----------ETNNGEDDKHHFKVVNDGFISLIDQEKS 192
           YGFPS GL + +NKWWGSS  D          ET+  +  +   KV     + ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+VE GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVY-RTYGVNKLGRKQRALLLRIFG 259

[Close]
BLAST of Lsi11G016260 vs. TrEMBL
Match: B9GT26_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R     +    +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHITLTPGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLD----------ETNNGEDDKHHFKVVNDGFISLIDQEKS 192
           YGFPS GL + +NKWWGSS  D          ET+  +  +   KV     + ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+ E GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVY-RTYGVNKLGRKQRALLLRIFG 259

[Close]
BLAST of Lsi11G016260 vs. TAIR10
Match: AT1G06500.1 (AT1G06500.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1 

Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]
BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|147810074|emb|CAN71458.1| (hypothetical protein VITISV_007604 [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 126 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 185

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 186 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 245

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 246 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]
BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|731409249|ref|XP_010657121.1| (PREDICTED: protein NLP3 [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]
BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|743840593|ref|XP_011026245.1| (PREDICTED: uncharacterized protein LOC105126913 [Populus euphratica])

HSP 1 Score: 116.7 bits (291), Expect = 5.9e-23
Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 1 

Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R     ++   +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHITLTSGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLDE--------TNNGEDDKHHFKVVNDGFIS--LIDQEKS 192
           YGFPS GL + +NKWWGSS  D         T   EDD H  +   D   S  ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGTETDEDDGHQSEEKADAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+VE GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVY-RAYGVNKLGRKQRALLLRIFG 259

[Close]
BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|595927153|ref|XP_007215066.1| (hypothetical protein PRUPE_ppa012313mg [Prunus persica])

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1 

Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD--ETNN 160
           QQ G+ N Q  R QNV + +  +G  + DEFK+GFPS GL + SNKWWGS+  D  E+  
Sbjct: 14  QQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 GE-----DDKHH--FKVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVERG 220
           GE     +DK H   K+ +DG  S ++D+EK ES +E+     QGT LL A+RK S+E G
Sbjct: 74  GEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLLMAVRKGSLEEG 133

Query: 221 RKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
           +K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 QKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]
BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|645246608|ref|XP_008229431.1| (PREDICTED: uncharacterized protein LOC103328797 [Prunus mume])

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-22
Identity = 71/162 (43.83%), Postives = 102/162 (62.96%), Query Frame = 1 

Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD------ 160
           QQ G+ N Q  R QN+ + +  +G  + DEFK+GFPS GL + SNKWWGS+  D      
Sbjct: 14  QQQGSKNVQTGRPQNILTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 ----ETNNGEDDKHHF-KVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 220
               ET+ G+  KH   K+ +DG  S ++D+EK ES +E+     +GT LL A+RKRS+E
Sbjct: 74  GQGAETDEGK--KHQSEKLADDGASSTVVDREKCESGKEE-NISSKGTDLLMAVRKRSLE 133

Query: 221 RGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
            G+K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 EGQKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPEQWIH 171

The following BLAST results are available for this feature:
BLAST of Lsi11G016260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi11G016260 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AM71_VITVI1.7e-2447.19Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1[more]
E0CU37_VITVI1.7e-2447.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=... [more]
M5XB29_PRUPE2.0e-2245.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1[more]
A9PJK4_9ROSI5.9e-2238.95Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
B9GT26_POPTR2.9e-2138.42Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1[more]
BLAST of Lsi11G016260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06500.11.3e-1231.06 unknown protein[more]
BLAST of Lsi11G016260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147810074|emb|CAN71458.1|2.4e-2447.19hypothetical protein VITISV_007604 [Vitis vinifera][more]
gi|731409249|ref|XP_010657121.1|2.4e-2447.19PREDICTED: protein NLP3 [Vitis vinifera][more]
gi|743840593|ref|XP_011026245.1|5.9e-2340.53PREDICTED: uncharacterized protein LOC105126913 [Populus euphratica][more]
gi|595927153|ref|XP_007215066.1|2.9e-2245.63hypothetical protein PRUPE_ppa012313mg [Prunus persica][more]
gi|645246608|ref|XP_008229431.1|6.5e-2243.83PREDICTED: uncharacterized protein LOC103328797 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G016260.1Lsi11G016260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32002FAMILY NOT NAMEDcoord: 101..251
score: 1.2
NoneNo IPR availablePANTHERPTHR32002:SF14SUBFAMILY NOT NAMEDcoord: 101..251
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G016260CmoCh11G020480Cucurbita moschata (Rifu)cmolsiB087
Lsi11G016260Cla005513Watermelon (97103) v1lsiwmB089
Lsi11G016260ClCG09G022520Watermelon (Charleston Gray)lsiwcgB076
Lsi11G016260Cla97C09G184050Watermelon (97103) v2lsiwmbB109
Lsi11G016260Bhi05G001755Wax gourdlsiwgoB114
Lsi11G016260Cp4.1LG04g02410Cucurbita pepo (Zucchini)cpelsiB531
Lsi11G016260Carg04670Silver-seed gourdcarlsiB352
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G016260Watermelon (97103) v2lsiwmbB088
Lsi11G016260Wax gourdlsiwgoB126
Lsi11G016260Bottle gourd (USVL1VR-Ls)lsilsiB023
Lsi11G016260Cucumber (Gy14) v1cgylsiB180
Lsi11G016260Cucumber (Gy14) v1cgylsiB392
Lsi11G016260Cucurbita maxima (Rimu)cmalsiB101
Lsi11G016260Cucurbita maxima (Rimu)cmalsiB474
Lsi11G016260Cucurbita maxima (Rimu)cmalsiB516
Lsi11G016260Cucurbita maxima (Rimu)cmalsiB559
Lsi11G016260Cucurbita moschata (Rifu)cmolsiB459
Lsi11G016260Cucurbita moschata (Rifu)cmolsiB497
Lsi11G016260Cucurbita moschata (Rifu)cmolsiB543
Lsi11G016260Cucurbita pepo (Zucchini)cpelsiB201
Lsi11G016260Cucurbita pepo (Zucchini)cpelsiB234
Lsi11G016260Cucurbita pepo (Zucchini)cpelsiB608
Lsi11G016260Wild cucumber (PI 183967)cpilsiB429
Lsi11G016260Wild cucumber (PI 183967)cpilsiB511
Lsi11G016260Cucumber (Chinese Long) v2culsiB426
Lsi11G016260Cucumber (Chinese Long) v2culsiB499
Lsi11G016260Melon (DHL92) v3.5.1lsimeB085
Lsi11G016260Melon (DHL92) v3.5.1lsimeB091
Lsi11G016260Watermelon (Charleston Gray)lsiwcgB099
Lsi11G016260Watermelon (97103) v1lsiwmB108
Lsi11G016260Cucumber (Gy14) v2cgyblsiB390
Lsi11G016260Cucumber (Gy14) v2cgyblsiB468
Lsi11G016260Melon (DHL92) v3.6.1lsimedB092
Lsi11G016260Melon (DHL92) v3.6.1lsimedB097
Lsi11G016260Silver-seed gourdcarlsiB029
Lsi11G016260Silver-seed gourdcarlsiB306
Lsi11G016260Silver-seed gourdcarlsiB484
Lsi11G016260Cucumber (Chinese Long) v3cuclsiB452
Lsi11G016260Cucumber (Chinese Long) v3cuclsiB456
Lsi11G016260Cucumber (Chinese Long) v3cuclsiB533