Cp4.1LG04g02410 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g02410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein NLP2
Location	Cp4.1LG04 : 7852194 .. 7854062 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTACAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAACAACTTCAGGGACAACTGCTTTGATCGTCGTACTCTGCCCTTCATAAGGTATTTTGATAGTTCTACTGTTCAATTGTAGTTTTCTTATTTAGGGTTTAAAAATATACTTAATTTATCATGAAATTAGAAAGATAGGGGGTATTATAGTTCTCTTTTATCACAAGGCGTATAAAAATGGTCAATGGTAAGTGGTAACATGATCTTATGGAATTGTTTCAGGATCTTATAAGGTTCACAAAGTTGGAACATGAGAATGACAGAAATGCGACTTTTATATTAGTAGGATAAGATACTTTTGGATAATAGTCTATCATTGGTAGGCTAATTTACAAATTTTGATAGCTCAAATAGTTATTATAGATTTATTCAGTTTATTCCAAATTGTTGATATATATTTTTTAAACCATGTTTAGAGTTCTTTCTTATGCGACAGCTTGTGCGGTGTTTAAGAATTTGATTTCAGTTATAGATTGATTTTAATTCTTAAACGATAATAAACTTGTTTTAAATTGCAAATTGGCAATTGACCGAGTTATTAATTGTCTTTAAGCAATAGATTTTTATGGGCATCATGTTCAATATTAATTGAGTTTCTGATTCCTTTTCCAAGTTCAAACTGTAAGTTGGTGGAACAAATAAAAGTAGTTGTGTTGAATATTTTTCTAATTGTCACTAAACTATAGTAAATTGCAATTTTTTTGCTGGATTGATTAGGCCTTTTTGTTTCTTTTCAGAACCTGTTGCCAAATTGTAGATGTAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCGACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTAGAGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGCTTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTCCTTTTCAAATTTTTATTGATGCAATGTAAGTTCTGTTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTGATTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTTGGTCAAAAGTTTGAATCTTGTTCACACTGTTACATTCTCGAGGAAAAGATGGACGTCATTAGTTTTTTGCAGTTTTGGATTTTGAAGTAATGTTGGTGTGTTACGAAGTTGATTTTAATTACTAATTCACTTACCTTAGGTGTCATTATCATCTTTGTATTCGTTAACTTTTCTTCTGTATATGTCTCAATGTAATTAACTAATCAACTTTAATCCATAAGCTTCAATTTGTAGCAATTTGTTCATGTATTAAAT

mRNA sequence

ATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTACAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGAACCTGTTGCCAAATTGTAGATGTAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCGACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTAGAGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGCTTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTCCTTTTCAAATTTTTATTGATGCAATGTAAGTTCTGTTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTGATTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTTGGTCAAAAGTTTGAATCTTGTTCACACTGTTACATTCTCGAGGAAAAGATGGACGTCATTAGTTTTTTGCAGTTTTGGATTTTGAAGTAATGTTGGTGTGTTACGAAGTTGATTTTAATTACTAATTCACTTACCTTAGGTGTCATTATCATCTTTGTATTCGTTAACTTTTCTTCTGTATATGTCTCAATGTAATTAACTAATCAACTTTAATCCATAAGCTTCAATTTGTAGCAATTTGTTCATGTATTAAAT

Coding sequence (CDS)

ATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTACAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGAACCTGTTGCCAAATTGTAG

Protein sequence

MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRKVLKHEPVAKL

Homology

[Close]

BLAST of Cp4.1LG04g02410 vs. TrEMBL
Match: M5XB29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-17
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 1


Query: 1   MSKLNG---TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKW 60
           M+K  G   +P + Q G+ N Q  RP NV + +  +G T+ DEFK+GFPS GL + SNKW
Sbjct: 1   MAKSQGITVSPPAQQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKW 60

Query: 61  WGSSCPD-------ETNNEVDDKHH--FKVVNDG-SASIIDQEKSGSIEEDLQADLQGTH 120
           WGS+ PD       E     +DK H   K+ +DG S++++D+EK  S +E+     QGT 
Sbjct: 61  WGSNSPDGYESVRGEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTD 120

Query: 121 LLTALRKRSLERGRKVLK 126
           LL A+RK SLE G+K LK
Sbjct: 121 LLMAVRKGSLEEGQKALK 137

[Close]

BLAST of Cp4.1LG04g02410 vs. TrEMBL
Match: A5AM71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1


Query: 1   MSKLNGT--PQSLQP-GNINAQIRRPLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISNK 60
           MSKL+G   P  LQ  G+ N Q  RP N+ + +  +G   SLDEFKYGFP+ GL + SNK
Sbjct: 127 MSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNK 186

Query: 61  WWGSSCPDETNNEV--------DDKHHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQGT 120
           WWGSS PD     +        +DK   + + D  A+  ++D EK+ + +E+     QGT
Sbjct: 187 WWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGT 246

Query: 121 HLLTALRKRSLERGRKVLK 126
            LLTA+RK ++E GRK+LK
Sbjct: 247 GLLTAVRKTTVEEGRKILK 265

[Close]

BLAST of Cp4.1LG04g02410 vs. TrEMBL
Match: E0CU37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1


Query: 1   MSKLNGT--PQSLQP-GNINAQIRRPLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISNK 60
           MSKL+G   P  LQ  G+ N Q  RP N+ + +  +G   SLDEFKYGFP+ GL + SNK
Sbjct: 116 MSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNK 175

Query: 61  WWGSSCPDETNNEV--------DDKHHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQGT 120
           WWGSS PD     +        +DK   + + D  A+  ++D EK+ + +E+     QGT
Sbjct: 176 WWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGT 235

Query: 121 HLLTALRKRSLERGRKVLK 126
            LLTA+RK ++E GRK+LK
Sbjct: 236 GLLTAVRKTTVEEGRKILK 254

[Close]

BLAST of Cp4.1LG04g02410 vs. TrEMBL
Match: A0A067FCP3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023462mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 1


Query: 2   SKLNGT---PQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWW 61
           SKL+G    P   Q G+ N+ + +P  + + N  +G  +LDEFK+GFPS GL + S KWW
Sbjct: 114 SKLHGVTSPPNLQQQGSKNSPVGQPHVLLNANLTKGIMALDEFKHGFPSDGLSTASYKWW 173

Query: 62  GSSCPDETN---------NEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLL 121
           G    D  +         +E D +   K   + +      EKSG+ E +   D QG+ LL
Sbjct: 174 GGRSSDGNDGIHKDESEIDEEDKQAEAKADKESATQATGNEKSGNGETESNVDPQGSGLL 233

Query: 122 TALRKRSLERGRKVLK 126
           TA RKR++E GR+ LK
Sbjct: 234 TAARKRTVEEGREALK 249

[Close]

BLAST of Cp4.1LG04g02410 vs. TrEMBL
Match: A0A067FBY6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023462mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 1


Query: 2   SKLNGT---PQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWW 61
           SKL+G    P   Q G+ N+ + +P  + + N  +G  +LDEFK+GFPS GL + S KWW
Sbjct: 75  SKLHGVTSPPNLQQQGSKNSPVGQPHVLLNANLTKGIMALDEFKHGFPSDGLSTASYKWW 134

Query: 62  GSSCPDETN---------NEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLL 121
           G    D  +         +E D +   K   + +      EKSG+ E +   D QG+ LL
Sbjct: 135 GGRSSDGNDGIHKDESEIDEEDKQAEAKADKESATQATGNEKSGNGETESNVDPQGSGLL 194

Query: 122 TALRKRSLERGRKVLK 126
           TA RKR++E GR+ LK
Sbjct: 195 TAARKRTVEEGREALK 210

[Close]

BLAST of Cp4.1LG04g02410 vs. TAIR10
Match: AT1G06500.1 (AT1G06500.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 31/98 (31.63%), Postives = 49/98 (50.00%), Query Frame = 1


Query: 28  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASII 87
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +  ++   E           DG     
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRA--EKGGRE-----------DGGGENT 80

Query: 88  DQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRKVLK 126
           +     + +E   +       L A+RKR  E GR+ ++
Sbjct: 81  ENGHVAACDETQNS-------LVAIRKRIAEEGREAVE 98

[Close]

BLAST of Cp4.1LG04g02410 vs. NCBI nr
Match: gi|595927153|ref|XP_007215066.1| (hypothetical protein PRUPE_ppa012313mg [Prunus persica])

HSP 1 Score: 95.9 bits (237), Expect = 5.6e-17
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 1


Query: 1   MSKLNG---TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKW 60
           M+K  G   +P + Q G+ N Q  RP NV + +  +G T+ DEFK+GFPS GL + SNKW
Sbjct: 1   MAKSQGITVSPPAQQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKW 60

Query: 61  WGSSCPD-------ETNNEVDDKHH--FKVVNDG-SASIIDQEKSGSIEEDLQADLQGTH 120
           WGS+ PD       E     +DK H   K+ +DG S++++D+EK  S +E+     QGT 
Sbjct: 61  WGSNSPDGYESVRGEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTD 120

Query: 121 LLTALRKRSLERGRKVLK 126
           LL A+RK SLE G+K LK
Sbjct: 121 LLMAVRKGSLEEGQKALK 137

[Close]

BLAST of Cp4.1LG04g02410 vs. NCBI nr
Match: gi|645246608|ref|XP_008229431.1| (PREDICTED: uncharacterized protein LOC103328797 [Prunus mume])

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16
Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = 1


Query: 1   MSKLNG---TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKW 60
           M+K  G   +P + Q G+ N Q  RP N+ + +  +G T+ DEFK+GFPS GL + SNKW
Sbjct: 1   MAKSQGITVSPPAQQQGSKNVQTGRPQNILTLSLTKGNTTYDEFKHGFPSDGLSTASNKW 60

Query: 61  WGSSCPDETNN------EVDD--KHHF-KVVNDG-SASIIDQEKSGSIEEDLQADLQGTH 120
           WGS+ PD   +      E D+  KH   K+ +DG S++++D+EK  S +E+     +GT 
Sbjct: 61  WGSNSPDGYESVRGQGAETDEGKKHQSEKLADDGASSTVVDREKCESGKEE-NISSKGTD 120

Query: 121 LLTALRKRSLERGRKVLK 126
           LL A+RKRSLE G+K LK
Sbjct: 121 LLMAVRKRSLEEGQKALK 137

[Close]

BLAST of Cp4.1LG04g02410 vs. NCBI nr
Match: gi|147810074|emb|CAN71458.1| (hypothetical protein VITISV_007604 [Vitis vinifera])

HSP 1 Score: 92.0 bits (227), Expect = 8.1e-16
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1


Query: 1   MSKLNGT--PQSLQP-GNINAQIRRPLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISNK 60
           MSKL+G   P  LQ  G+ N Q  RP N+ + +  +G   SLDEFKYGFP+ GL + SNK
Sbjct: 127 MSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNK 186

Query: 61  WWGSSCPDETNNEV--------DDKHHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQGT 120
           WWGSS PD     +        +DK   + + D  A+  ++D EK+ + +E+     QGT
Sbjct: 187 WWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGT 246

Query: 121 HLLTALRKRSLERGRKVLK 126
            LLTA+RK ++E GRK+LK
Sbjct: 247 GLLTAVRKTTVEEGRKILK 265

[Close]

BLAST of Cp4.1LG04g02410 vs. NCBI nr
Match: gi|731409249|ref|XP_010657121.1| (PREDICTED: protein NLP3 [Vitis vinifera])

HSP 1 Score: 92.0 bits (227), Expect = 8.1e-16
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1


Query: 1   MSKLNGT--PQSLQP-GNINAQIRRPLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISNK 60
           MSKL+G   P  LQ  G+ N Q  RP N+ + +  +G   SLDEFKYGFP+ GL + SNK
Sbjct: 116 MSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNK 175

Query: 61  WWGSSCPDETNNEV--------DDKHHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQGT 120
           WWGSS PD     +        +DK   + + D  A+  ++D EK+ + +E+     QGT
Sbjct: 176 WWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGT 235

Query: 121 HLLTALRKRSLERGRKVLK 126
            LLTA+RK ++E GRK+LK
Sbjct: 236 GLLTAVRKTTVEEGRKILK 254

[Close]

BLAST of Cp4.1LG04g02410 vs. NCBI nr
Match: gi|470136188|ref|XP_004303879.1| (PREDICTED: uncharacterized protein LOC101310432 [Fragaria vesca subsp. vesca])

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 1


Query: 12  QPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPD------- 71
           Q G+ N Q  RP N+ + +  +G T+L+EFK GFPS GL + SN+WWGS+ PD       
Sbjct: 8   QQGSKNVQTGRPHNLLTLSLTKG-TTLEEFKSGFPSEGLSTASNRWWGSNSPDCDEGIHG 67

Query: 72  -ETNNEVDDKHHFKVVNDGSASII--DQEKSGSIEEDLQADLQGTHLLTALRKRSLERGR 126
              N + ++KH    + D SAS I  +QEK GS +++   D QGT LL A+RKR++E G+
Sbjct: 68  EADNADEENKHQSNKLADDSASSITGNQEKCGSEKQENNIDPQGTDLLVAVRKRAVEEGK 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g02410 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g02410 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XB29_PRUPE	3.9e-17	44.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1	[more]
A5AM71_VITVI	5.7e-16	43.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1	[more]
E0CU37_VITVI	5.7e-16	43.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=...	[more]
A0A067FCP3_CITSI	2.6e-13	37.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023462mg PE=4 SV=1	[more]
A0A067FBY6_CITSI	2.6e-13	37.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023462mg PE=4 SV=1	[more]

BLAST of Cp4.1LG04g02410 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06500.1	1.6e-06	31.63	unknown protein	[more]

BLAST of Cp4.1LG04g02410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595927153\|ref\|XP_007215066.1\|	5.6e-17	44.20	hypothetical protein PRUPE_ppa012313mg [Prunus persica]	[more]
gi\|645246608\|ref\|XP_008229431.1\|	1.3e-16	43.48	PREDICTED: uncharacterized protein LOC103328797 [Prunus mume]	[more]
gi\|147810074\|emb\|CAN71458.1\|	8.1e-16	43.17	hypothetical protein VITISV_007604 [Vitis vinifera]	[more]
gi\|731409249\|ref\|XP_010657121.1\|	8.1e-16	43.17	PREDICTED: protein NLP3 [Vitis vinifera]	[more]
gi\|470136188\|ref\|XP_004303879.1\|	2.4e-15	43.55	PREDICTED: uncharacterized protein LOC101310432 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g02410.1	Cp4.1LG04g02410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 9..127 score: 2.0
None	No IPR available	PANTHER	PTHR32002:SF14	SUBFAMILY NOT NAMED	coord: 9..127 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g02410	CmoCh11G020480	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g02410	Cla005513	Watermelon (97103) v1	cpewmB626
Cp4.1LG04g02410	ClCG09G022520	Watermelon (Charleston Gray)	cpewcgB574
Cp4.1LG04g02410	Lsi11G016260	Bottle gourd (USVL1VR-Ls)	cpelsiB531
Cp4.1LG04g02410	Bhi05G001755	Wax gourd	cpewgoB0854
Cp4.1LG04g02410	Carg04670	Silver-seed gourd	carcpeB0547

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g02410	Wax gourd	cpewgoB0865
Cp4.1LG04g02410	Cucurbita pepo (Zucchini)	cpecpeB267
Cp4.1LG04g02410	Cucurbita pepo (Zucchini)	cpecpeB306
Cp4.1LG04g02410	Cucurbita pepo (Zucchini)	cpecpeB492
Cp4.1LG04g02410	Cucumber (Gy14) v1	cgycpeB0297
Cp4.1LG04g02410	Cucumber (Gy14) v1	cgycpeB0636
Cp4.1LG04g02410	Cucurbita maxima (Rimu)	cmacpeB148
Cp4.1LG04g02410	Cucurbita maxima (Rimu)	cmacpeB537
Cp4.1LG04g02410	Cucurbita maxima (Rimu)	cmacpeB573
Cp4.1LG04g02410	Cucurbita maxima (Rimu)	cmacpeB642
Cp4.1LG04g02410	Cucurbita moschata (Rifu)	cmocpeB492
Cp4.1LG04g02410	Cucurbita moschata (Rifu)	cmocpeB524
Cp4.1LG04g02410	Cucurbita moschata (Rifu)	cmocpeB592
Cp4.1LG04g02410	Wild cucumber (PI 183967)	cpecpiB693
Cp4.1LG04g02410	Wild cucumber (PI 183967)	cpecpiB690
Cp4.1LG04g02410	Cucumber (Chinese Long) v2	cpecuB688
Cp4.1LG04g02410	Cucumber (Chinese Long) v2	cpecuB691
Cp4.1LG04g02410	Bottle gourd (USVL1VR-Ls)	cpelsiB523
Cp4.1LG04g02410	Watermelon (Charleston Gray)	cpewcgB592
Cp4.1LG04g02410	Watermelon (97103) v1	cpewmB668
Cp4.1LG04g02410	Melon (DHL92) v3.5.1	cpemeB598
Cp4.1LG04g02410	Melon (DHL92) v3.5.1	cpemeB611
Cp4.1LG04g02410	Cucumber (Gy14) v2	cgybcpeB839
Cp4.1LG04g02410	Cucumber (Gy14) v2	cgybcpeB843
Cp4.1LG04g02410	Cucumber (Gy14) v2	cgybcpeB965
Cp4.1LG04g02410	Melon (DHL92) v3.6.1	cpemedB707
Cp4.1LG04g02410	Melon (DHL92) v3.6.1	cpemedB723
Cp4.1LG04g02410	Silver-seed gourd	carcpeB0047
Cp4.1LG04g02410	Silver-seed gourd	carcpeB0474
Cp4.1LG04g02410	Silver-seed gourd	carcpeB0754
Cp4.1LG04g02410	Cucumber (Chinese Long) v3	cpecucB0862
Cp4.1LG04g02410	Cucumber (Chinese Long) v3	cpecucB0854
Cp4.1LG04g02410	Cucumber (Chinese Long) v3	cpecucB0864