Lsi11G016260 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G016260
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	chr11 : 24613189 .. 24614861 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGGTATATTAGCGGTTTCATGTTGGATTAGTTCCGCATAAGAATGTAATTGAACCAAACATTTTGGCAATTAGATGTTTCCGGAGTTGTGGACGTATATAATGGCTTTATCTTTGTGATCAATTTCGGTACAATTTACATTTTTGCTTTCTGAGTTGCTACAAATTGTTTCAAAATTGGAGAAATTTTGATATACCTATCGCTGTTAGTTGGTCGATGCCTTCGATTATTGGGCCAATCTATGGTAATTACGAACTAGTTACTTCTATTCGTTTCTTTGTTACACTTAGTATGTAAAGACTAAAGAGCGAGTGTGTTATGCTTGCATTAACAGGAGATATATTGTTTGCTTTTGCATCACCTGCATCAGATGTATTTTTCATATTGCAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTGTATGCATCGGATAATCTATTGAATTTCAAATAAATCAATGTTACCAACTTAGTATTTGATGGTCACTAATATTTTTGACATCGTTGTTATCCATTATATTTGAAATAAAAATAAAAATGTTTGTAGTTTATATCTATTTGGCCATCTCTGTTCTTCTTGAGAGGTTTAGTTCACAATCCATCTGCCCTTTCTTCCAACTGAAGTTTGCATTTACTGAGACTTGAGAGGTTCTCCTTGGTTCAACAGTTTACTTAGACTTGAGAAGTTTGCATTTAATGAATGTTTTGTTGTAATTGTGTCTCTAATCATGCTGTTGATAGTTCCTTTTGTTTTCGTATGTTATCAAAGTTTTATCTGGACAATATTTTTGTGAAATATAATTTTGCTGGCATTTGGGTTTAGTGATAGTTGTATAAGACATTTTGCTGTATTTCTCTTGTAATAATGCTTTTTGGATTTCATGCATACTACTAAACTAACAACTTCTATTCCTCTTTCTCACTTTCACTTTTATCATCCTACTCAGTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

mRNA sequence

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Coding sequence (CDS)

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Protein sequence

MCEIKPEEKGILRCRPTDLSTAIPAAALVRVTASSRPPLLFLTPSPNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

Homology

[Close]

BLAST of Lsi11G016260 vs. TrEMBL
Match: A5AM71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 126 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 185

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 186 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 245

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 246 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]

BLAST of Lsi11G016260 vs. TrEMBL
Match: E0CU37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]

BLAST of Lsi11G016260 vs. TrEMBL
Match: M5XB29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1


Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD--ETNN 160
           QQ G+ N Q  R QNV + +  +G  + DEFK+GFPS GL + SNKWWGS+  D  E+  
Sbjct: 14  QQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 GE-----DDKHH--FKVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVERG 220
           GE     +DK H   K+ +DG  S ++D+EK ES +E+     QGT LL A+RK S+E G
Sbjct: 74  GEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLLMAVRKGSLEEG 133

Query: 221 RKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
           +K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 QKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]

BLAST of Lsi11G016260 vs. TrEMBL
Match: A9PJK4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-22
Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R   + +    +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHIMLTPGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLD----------ETNNGEDDKHHFKVVNDGFISLIDQEKS 192
           YGFPS GL + +NKWWGSS  D          ET+  +  +   KV     + ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+VE GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVY-RTYGVNKLGRKQRALLLRIFG 259

[Close]

BLAST of Lsi11G016260 vs. TrEMBL
Match: B9GT26_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 1


Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R     +    +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHITLTPGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLD----------ETNNGEDDKHHFKVVNDGFISLIDQEKS 192
           YGFPS GL + +NKWWGSS  D          ET+  +  +   KV     + ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+ E GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVY-RTYGVNKLGRKQRALLLRIFG 259

[Close]

BLAST of Lsi11G016260 vs. TAIR10
Match: AT1G06500.1 (AT1G06500.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|147810074|emb|CAN71458.1| (hypothetical protein VITISV_007604 [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 126 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 185

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 186 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 245

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 246 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|731409249|ref|XP_010657121.1| (PREDICTED: protein NLP3 [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|743840593|ref|XP_011026245.1| (PREDICTED: uncharacterized protein LOC105126913 [Populus euphratica])

HSP 1 Score: 116.7 bits (291), Expect = 5.9e-23
Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R     ++   +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHITLTSGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLDE--------TNNGEDDKHHFKVVNDGFIS--LIDQEKS 192
           YGFPS GL + +NKWWGSS  D         T   EDD H  +   D   S  ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGTETDEDDGHQSEEKADAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+VE GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVY-RAYGVNKLGRKQRALLLRIFG 259

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|595927153|ref|XP_007215066.1| (hypothetical protein PRUPE_ppa012313mg [Prunus persica])

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1


Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD--ETNN 160
           QQ G+ N Q  R QNV + +  +G  + DEFK+GFPS GL + SNKWWGS+  D  E+  
Sbjct: 14  QQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 GE-----DDKHH--FKVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVERG 220
           GE     +DK H   K+ +DG  S ++D+EK ES +E+     QGT LL A+RK S+E G
Sbjct: 74  GEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLLMAVRKGSLEEG 133

Query: 221 RKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
           +K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 QKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]

BLAST of Lsi11G016260 vs. NCBI nr
Match: gi|645246608|ref|XP_008229431.1| (PREDICTED: uncharacterized protein LOC103328797 [Prunus mume])

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-22
Identity = 71/162 (43.83%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD------ 160
           QQ G+ N Q  R QN+ + +  +G  + DEFK+GFPS GL + SNKWWGS+  D      
Sbjct: 14  QQQGSKNVQTGRPQNILTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 ----ETNNGEDDKHHF-KVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 220
               ET+ G+  KH   K+ +DG  S ++D+EK ES +E+     +GT LL A+RKRS+E
Sbjct: 74  GQGAETDEGK--KHQSEKLADDGASSTVVDREKCESGKEE-NISSKGTDLLMAVRKRSLE 133

Query: 221 RGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
            G+K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 EGQKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPEQWIH 171

The following BLAST results are available for this feature:

BLAST of Lsi11G016260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G016260 vs. TrEMBL


Match Name	E-value	Identity	Description
A5AM71_VITVI	1.7e-24	47.19	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1	[more]
E0CU37_VITVI	1.7e-24	47.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=...	[more]
M5XB29_PRUPE	2.0e-22	45.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1	[more]
A9PJK4_9ROSI	5.9e-22	38.95	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9GT26_POPTR	2.9e-21	38.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1	[more]

BLAST of Lsi11G016260 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06500.1	1.3e-12	31.06	unknown protein	[more]

BLAST of Lsi11G016260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147810074\|emb\|CAN71458.1\|	2.4e-24	47.19	hypothetical protein VITISV_007604 [Vitis vinifera]	[more]
gi\|731409249\|ref\|XP_010657121.1\|	2.4e-24	47.19	PREDICTED: protein NLP3 [Vitis vinifera]	[more]
gi\|743840593\|ref\|XP_011026245.1\|	5.9e-23	40.53	PREDICTED: uncharacterized protein LOC105126913 [Populus euphratica]	[more]
gi\|595927153\|ref\|XP_007215066.1\|	2.9e-22	45.63	hypothetical protein PRUPE_ppa012313mg [Prunus persica]	[more]
gi\|645246608\|ref\|XP_008229431.1\|	6.5e-22	43.83	PREDICTED: uncharacterized protein LOC103328797 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G016260.1	Lsi11G016260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 101..251 score: 1.2
None	No IPR available	PANTHER	PTHR32002:SF14	SUBFAMILY NOT NAMED	coord: 101..251 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G016260	CmoCh11G020480	Cucurbita moschata (Rifu)	cmolsiB087
Lsi11G016260	Cla005513	Watermelon (97103) v1	lsiwmB089
Lsi11G016260	ClCG09G022520	Watermelon (Charleston Gray)	lsiwcgB076
Lsi11G016260	Cla97C09G184050	Watermelon (97103) v2	lsiwmbB109
Lsi11G016260	Bhi05G001755	Wax gourd	lsiwgoB114
Lsi11G016260	Cp4.1LG04g02410	Cucurbita pepo (Zucchini)	cpelsiB531
Lsi11G016260	Carg04670	Silver-seed gourd	carlsiB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G016260	Melon (DHL92) v3.6.1	lsimedB092
Lsi11G016260	Melon (DHL92) v3.6.1	lsimedB097
Lsi11G016260	Silver-seed gourd	carlsiB029
Lsi11G016260	Silver-seed gourd	carlsiB306
Lsi11G016260	Silver-seed gourd	carlsiB484
Lsi11G016260	Cucumber (Chinese Long) v3	cuclsiB452
Lsi11G016260	Cucumber (Chinese Long) v3	cuclsiB456
Lsi11G016260	Cucumber (Chinese Long) v3	cuclsiB533
Lsi11G016260	Watermelon (97103) v2	lsiwmbB088
Lsi11G016260	Wax gourd	lsiwgoB126
Lsi11G016260	Bottle gourd (USVL1VR-Ls)	lsilsiB023
Lsi11G016260	Cucumber (Gy14) v1	cgylsiB180
Lsi11G016260	Cucumber (Gy14) v1	cgylsiB392
Lsi11G016260	Cucurbita maxima (Rimu)	cmalsiB101
Lsi11G016260	Cucurbita maxima (Rimu)	cmalsiB474
Lsi11G016260	Cucurbita maxima (Rimu)	cmalsiB516
Lsi11G016260	Cucurbita maxima (Rimu)	cmalsiB559
Lsi11G016260	Cucurbita moschata (Rifu)	cmolsiB459
Lsi11G016260	Cucurbita moschata (Rifu)	cmolsiB497
Lsi11G016260	Cucurbita moschata (Rifu)	cmolsiB543
Lsi11G016260	Cucurbita pepo (Zucchini)	cpelsiB201
Lsi11G016260	Cucurbita pepo (Zucchini)	cpelsiB234
Lsi11G016260	Cucurbita pepo (Zucchini)	cpelsiB608
Lsi11G016260	Wild cucumber (PI 183967)	cpilsiB429
Lsi11G016260	Wild cucumber (PI 183967)	cpilsiB511
Lsi11G016260	Cucumber (Chinese Long) v2	culsiB426
Lsi11G016260	Cucumber (Chinese Long) v2	culsiB499
Lsi11G016260	Melon (DHL92) v3.5.1	lsimeB085
Lsi11G016260	Melon (DHL92) v3.5.1	lsimeB091
Lsi11G016260	Watermelon (Charleston Gray)	lsiwcgB099
Lsi11G016260	Watermelon (97103) v1	lsiwmB108
Lsi11G016260	Cucumber (Gy14) v2	cgyblsiB390
Lsi11G016260	Cucumber (Gy14) v2	cgyblsiB468