CmoCh11G020480 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G020480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RWP-RK transcription factor
Location	Cmo_Chr11 : 13884362 .. 13887371 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGAATTAAATGAGGAGGTAAGGGGCTTCTCCGTTGCCGCCCTAATTGTATGCACTCTTCCAACCCTTGGACGGACCGGCGATTGCAGATTCAATTTTCCGTTACCATCGATCTCTCGACGCCGATACCAGCCGCCGCTCTGGTTAGGGTTAGCTTCCTCCTGCCTTCGACTTCTCTTCCAAACGCTATCACCAAATACTTCCCTCCCTCACTTTCACTAGTCGCTGCCCAGTGCCCTCCAAGGTATGTTAGAGAGTACACATTCGCCTTTATTTCTCTTTTCTTCTTGTTTTCTTTAAGTCGCCTTGTTGGAAAAATCCGCAGTAGAAGAACTTTTTTAATGTGAGGTTACAAGTGCCCAAACATCTTGGTAATTAGATGTTTCCGTAGTTGCGGACGGATATAGTGGCTTTATCTTCGTGATCGATTTCGGCATAATTCACATTTTTTTTCTAAGTTTCCATGAAACATTTTTGCAATTGAAAAATGTTTGATTTCCCTATCGCTGTTTGTTGGTCGACGACTACGACTATTGGCTCAATCTATGGCCACTATGAATTCTATTCCTTTTCTTTGTTACACTTGACACATAAAGAGCGAGATTAACATTGAATACAATATGTTTGCTTTTGCATCACCTGCATCAGATGCTATTTTTCCATAGTAGGTAAGGCCAATGGGTTAGAGTGAAGCTTCCTAATTGACATGGTCAAAGAAATCCTATAATTACAACAAAAAAAAAAAAAAAAAAGTTGTATCACTCAATCAGATAATATTTTAGGAAATCAATATACCAACATATAATTTCGTCGTCACTGATTTTTTCGACACCGTTATCCATTATACATGCTCATTTAGGAAATCAGATAATATTTTCTTGAGAGGCTTGGTTCACAATTCATCTGCCTTTTTCTTCCAACTGATCTTCTCATTTACTGAAACTTGAGAGGTCTTCCTTGGCTCAACAATTTACTTAGACTTGAGAGGTGTAGCTAATGTAAGTTTGGTTCTAATTGTCTCTGATCTCGCTGTTCATAGTTCTTTTGGTTTTCATATGTTATCAATCTGTTGACAAGATATCCGTTAAATTAAGTTTTGCATGTATTTGAGTTCTAGAGTGATAATTGTACTATATTGTTGTATTTTTCAAATAATAATGCTTTTTAGGTCTCATGCATACTACTGAACTTACTACTTCTATTCTTCTTTCTCCCTTTCACTTTTATCATCCCACACAGTAATATCCAGCAAGTGAATGAGAAAATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAACAACTTCAGGGACAACTGCTTTGATCGTCGTACTCTGCCCTTCATAAGGTATTTTGATAGTTCTACTGTTCCATTGTAGTTTTCTTATTTAGGGTTTAAAAATATACTTAATTTATTATGAAATTATAAAGATAGGGGTATTATAGTTCTCTTTTATCATCCATAACAAGGCGTATAAAAATGGTCAATGGTAAGTGGTAACATGATCTTATGGAGTTGTTTCAGGATCTTATAAGGTTCACAAAGTTGGAACATGAGAATGACAGAAATGCGACTTTTATATTAGTAGGATAAGGTACTTTTGGATAATAGTCTATCATTGATGGGCTAATTTACAAATTTTGATAGCTCAAATAGTTATGATAGATTTATTCAGTTTATTCCAAATCGTTGATATATATTTTTTAAACCATGTTTAGAGTTCTGATGCGACAGCTTGTGCGGTGATTAAGAATTTGATTTCAGTTATAGATTGATTTTAATTCTTAAACGATAATAAACTTGTTTTAAATTGCAAATTGGCAATTGACCGAGTTATTAATTGTCTTTAAGCAATAGATTTTTATGGGCATCATGTTCAATATTAATTGAGTTTCTGATTCTTTTTCCAAGTTCAAACTGTAAGTTGGTGGAACAAATGAAAGTAGTTGTGTTGAATATTTTTCTAATTGTCACTAAACTATAGTAAATTGCAATTTTTTTGCTGGATTGATCAGGCCTTTTTGTTTCTTTTCAGAACCTGTTGCCAAATTGTAGATGGAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCGACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTGGAGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGCTTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTTTTCAAATTTTTATTGATGCTATGTAAGTGCTATTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTCTTTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTTGGTCAAAAGTTTGAATCTTGTTCACACTGTTACGTTCTCGAGGAAAAGATGGACGCCATTAGTTTTTTGCAGTTTTGGATTTTGAAGTAATTTTGGTGTTACGAAGTTGATTTTAATTACTAACTCACTTACC

mRNA sequence

GCAGAATTAAATGAGGAGGTAAGGGGCTTCTCCGTTGCCGCCCTAATTGTATGCACTCTTCCAACCCTTGGACGGACCGGCGATTGCAGATTCAATTTTCCGTTACCATCGATCTCTCGACGCCGATACCAGCCGCCGCTCTGGTTAGGGTTAGCTTCCTCCTGCCTTCGACTTCTCTTCCAAACGCTATCACCAAATACTTCCCTCCCTCACTTTCACTAGTCGCTGCCCAGTGCCCTCCAAGTAATATCCAGCAAGTGAATGAGAAAATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAACAACTTCAGGGACAACTGCTTTGATCGTCGTACTCTGCCCTTCATAAGAACCTGTTGCCAAATTGTAGATGGAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCGACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTGGAGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGCTTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTTTTCAAATTTTTATTGATGCTATGTAAGTGCTATTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTCTTTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTTGGTCAAAAGTTTGAATCTTGTTCACACTGTTACGTTCTCGAGGAAAAGATGGACGCCATTAGTTTTTTGCAGTTTTGGATTTTGAAGTAATTTTGGTGTTACGAAGTTGATTTTAATTACTAACTCACTTACC

Coding sequence (CDS)

ATGCACTCTTCCAACCCTTGGACGGACCGGCGATTGCAGATTCAATTTTCCGTTACCATCGATCTCTCGACGCCGATACCAGCCGCCGCTCTGGTTAGGGTTAGCTTCCTCCTGCCTTCGACTTCTCTTCCAAACGCTATCACCAAATACTTCCCTCCCTCACTTTCACTAGTCGCTGCCCAGTGCCCTCCAAGTAATATCCAGCAAGTGAATGAGAAAATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAA

Homology

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BLAST of CmoCh11G020480 vs. TrEMBL
Match: M5XB29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27
Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 1


Query: 73  KMSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWG 132
           K   +  +P + Q G+ N Q  RP NV + +  +G T+ DEFK+GFPS GL + SNKWWG
Sbjct: 3   KSQGITVSPPAQQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWG 62

Query: 133 SSCPD-------ETNNEVDDKHH--FKVVNDG-SASIIDQEKSGSIEEDLQADLQGTHLL 192
           S+ PD       E     +DK H   K+ +DG S++++D+EK  S +E+     QGT LL
Sbjct: 63  SNSPDGYESVRGEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLL 122

Query: 193 TALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWIN 234
            A+RK SLE G+K LK G  F G+G  KL ++ER+LLL IF+SS P +WI+
Sbjct: 123 MAVRKGSLEEGQKALKLG-VFRGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]

BLAST of CmoCh11G020480 vs. TrEMBL
Match: E0CU37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = 1


Query: 73  KMSKLNGT--PQSLQP-GNINAQIRRPLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISN 132
           KMSKL+G   P  LQ  G+ N Q  RP N+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 133 KWWGSSCPDETNNEV--------DDKHHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQG 192
           KWWGSS PD     +        +DK   + + D  A+  ++D EK+ + +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 193 THLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 236
           T LLTA+RK ++E GRK+LK G     HG+ K  KKER LLL IF SS+P +WIN S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVG-RDHGVLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]

BLAST of CmoCh11G020480 vs. TrEMBL
Match: A5AM71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 86/211 (40.76%), Postives = 120/211 (56.87%), Query Frame = 1


Query: 39  PSTSLPNAITKYFPPSLSLVAAQCPPSNIQQVNEKMSKLNGT--PQSLQP-GNINAQIRR 98
           P+  L  +    +PP   + +   P ++ +    KMSKL+G   P  LQ  G+ N Q  R
Sbjct: 94  PAGGLGASCLPRWPPDCHIGSQ--PQNDTKSSLWKMSKLHGAIPPHMLQQQGSRNIQNGR 153

Query: 99  PLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEV--------DDK 158
           P N+ + +  +G   SLDEFKYGFP+ GL + SNKWWGSS PD     +        +DK
Sbjct: 154 PQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTIGNGVEIDEEDK 213

Query: 159 HHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRKVLKHGNSFH 218
              + + D  A+  ++D EK+ + +E+     QGT LLTA+RK ++E GRK+LK G    
Sbjct: 214 KQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTTVEEGRKILKIGVG-R 273

Query: 219 GHGLNKLSKKERSLLLNIFRSSVPDEWINNS 236
            HG+ K  KKER LLL IF SS+P +WIN S
Sbjct: 274 DHGVLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]

BLAST of CmoCh11G020480 vs. TrEMBL
Match: A9PJK4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.5e-23
Identity = 76/183 (41.53%), Postives = 107/183 (58.47%), Query Frame = 1


Query: 65  SNIQQVNEKMSKLNGTPQSLQP-GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGL 124
           S IQQ N + SK    P  LQ  G  +  + R   + +    +G   LDEFKYGFPS GL
Sbjct: 90  SGIQQQNNENSK----PHKLQQQGTKDVLVGRQHIMLTPGLAKGLMGLDEFKYGFPSDGL 149

Query: 125 PSISNKWWGSSCPD----------ETNNEVDDKHHFKVVNDGSASIIDQEK--SGSIEED 184
            + +NKWWGSS  D          ET+ +   +   KV    S  I+D+EK  +G +E +
Sbjct: 150 STATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTSVVIVDEEKGENGKMESN 209

Query: 185 LQADLQGTHLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEW 235
            + D QGT LLT++RKR++E GR+ LK G  +  +G+NKL +K+R+LLL IF SS+P +W
Sbjct: 210 -EIDPQGTGLLTSVRKRAVEEGREALKLG-VYRTYGVNKLGRKQRALLLRIFGSSLPKQW 266

[Close]

BLAST of CmoCh11G020480 vs. TrEMBL
Match: B9GT26_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 1


Query: 65  SNIQQVNEKMSKLNGTPQSLQP-GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGL 124
           S IQQ N + SK    P  LQ  G  +  + R     +    +G   LDEFKYGFPS GL
Sbjct: 90  SGIQQQNNENSK----PHKLQQQGTKDVLVGRQHITLTPGLAKGLMGLDEFKYGFPSDGL 149

Query: 125 PSISNKWWGSSCPD----------ETNNEVDDKHHFKVVNDGSASIIDQEK--SGSIEED 184
            + +NKWWGSS  D          ET+ +   +   KV    S  I+D+EK  +G +E +
Sbjct: 150 STATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTSVVIVDEEKGENGKMESN 209

Query: 185 LQADLQGTHLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEW 235
            + D QGT LLT++RKR+ E GR+ LK G  +  +G+NKL +K+R+LLL IF SS+P +W
Sbjct: 210 -EIDPQGTGLLTSVRKRAAEEGREALKLG-VYRTYGVNKLGRKQRALLLRIFGSSLPKQW 266

[Close]

BLAST of CmoCh11G020480 vs. TAIR10
Match: AT1G06500.1 (AT1G06500.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 9.3e-13
Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 101 STNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASII 160
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +  ++   E           DG     
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRA--EKGGRE-----------DGGGENT 80

Query: 161 DQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLL 220
           +     + +E   +       L A+RKR  E GR+ ++ G    G G  +  K++++LL 
Sbjct: 81  ENGHVAACDETQNS-------LVAIRKRIAEEGREAVELG-LHQGFGSKRPGKRDQALLF 131

Query: 221 NIFRSSVPDEWI 233
            IF S++P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]

BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|645246608|ref|XP_008229431.1| (PREDICTED: uncharacterized protein LOC103328797 [Prunus mume])

HSP 1 Score: 130.2 bits (326), Expect = 4.8e-27
Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1


Query: 73  KMSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWG 132
           K   +  +P + Q G+ N Q  RP N+ + +  +G T+ DEFK+GFPS GL + SNKWWG
Sbjct: 3   KSQGITVSPPAQQQGSKNVQTGRPQNILTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWG 62

Query: 133 SSCPDETNN------EVDD--KHHF-KVVNDG-SASIIDQEKSGSIEEDLQADLQGTHLL 192
           S+ PD   +      E D+  KH   K+ +DG S++++D+EK  S +E+     +GT LL
Sbjct: 63  SNSPDGYESVRGQGAETDEGKKHQSEKLADDGASSTVVDREKCESGKEE-NISSKGTDLL 122

Query: 193 TALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWIN 234
            A+RKRSLE G+K LK G  F G+G  KL ++ER+LLL IF+SS P++WI+
Sbjct: 123 MAVRKRSLEEGQKALKLG-VFRGYGAKKLGRRERALLLRIFKSSTPEQWIH 171

[Close]

BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|595927153|ref|XP_007215066.1| (hypothetical protein PRUPE_ppa012313mg [Prunus persica])

HSP 1 Score: 130.2 bits (326), Expect = 4.8e-27
Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 1


Query: 73  KMSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWG 132
           K   +  +P + Q G+ N Q  RP NV + +  +G T+ DEFK+GFPS GL + SNKWWG
Sbjct: 3   KSQGITVSPPAQQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWG 62

Query: 133 SSCPD-------ETNNEVDDKHH--FKVVNDG-SASIIDQEKSGSIEEDLQADLQGTHLL 192
           S+ PD       E     +DK H   K+ +DG S++++D+EK  S +E+     QGT LL
Sbjct: 63  SNSPDGYESVRGEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLL 122

Query: 193 TALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWIN 234
            A+RK SLE G+K LK G  F G+G  KL ++ER+LLL IF+SS P +WI+
Sbjct: 123 MAVRKGSLEEGQKALKLG-VFRGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]

BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|731409249|ref|XP_010657121.1| (PREDICTED: protein NLP3 [Vitis vinifera])

HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26
Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = 1


Query: 73  KMSKLNGT--PQSLQP-GNINAQIRRPLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISN 132
           KMSKL+G   P  LQ  G+ N Q  RP N+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 133 KWWGSSCPDETNNEV--------DDKHHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQG 192
           KWWGSS PD     +        +DK   + + D  A+  ++D EK+ + +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 193 THLLTALRKRSLERGRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 236
           T LLTA+RK ++E GRK+LK G     HG+ K  KKER LLL IF SS+P +WIN S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVG-RDHGVLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]

BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|470136188|ref|XP_004303879.1| (PREDICTED: uncharacterized protein LOC101310432 [Fragaria vesca subsp. vesca])

HSP 1 Score: 125.9 bits (315), Expect = 9.0e-26
Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = 1


Query: 85  QPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPD------- 144
           Q G+ N Q  RP N+ + +  +G T+L+EFK GFPS GL + SN+WWGS+ PD       
Sbjct: 8   QQGSKNVQTGRPHNLLTLSLTKG-TTLEEFKSGFPSEGLSTASNRWWGSNSPDCDEGIHG 67

Query: 145 -ETNNEVDDKHHFKVVNDGSASII--DQEKSGSIEEDLQADLQGTHLLTALRKRSLERGR 204
              N + ++KH    + D SAS I  +QEK GS +++   D QGT LL A+RKR++E G+
Sbjct: 68  EADNADEENKHQSNKLADDSASSITGNQEKCGSEKQENNIDPQGTDLLVAVRKRAVEEGK 127

Query: 205 KVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 236
           K  K G  F G+G  KL +KER++LL IF SS+P +WI +S
Sbjct: 128 KARKLG-VFRGYGARKLGRKERTMLLRIFESSLPKDWIPDS 166

[Close]

BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|147810074|emb|CAN71458.1| (hypothetical protein VITISV_007604 [Vitis vinifera])

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25
Identity = 86/211 (40.76%), Postives = 120/211 (56.87%), Query Frame = 1


Query: 39  PSTSLPNAITKYFPPSLSLVAAQCPPSNIQQVNEKMSKLNGT--PQSLQP-GNINAQIRR 98
           P+  L  +    +PP   + +   P ++ +    KMSKL+G   P  LQ  G+ N Q  R
Sbjct: 94  PAGGLGASCLPRWPPDCHIGSQ--PQNDTKSSLWKMSKLHGAIPPHMLQQQGSRNIQNGR 153

Query: 99  PLNVQSTNWVQG-PTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEV--------DDK 158
           P N+ + +  +G   SLDEFKYGFP+ GL + SNKWWGSS PD     +        +DK
Sbjct: 154 PQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTIGNGVEIDEEDK 213

Query: 159 HHFKVVNDGSAS--IIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRKVLKHGNSFH 218
              + + D  A+  ++D EK+ + +E+     QGT LLTA+RK ++E GRK+LK G    
Sbjct: 214 KQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTTVEEGRKILKIGVG-R 273

Query: 219 GHGLNKLSKKERSLLLNIFRSSVPDEWINNS 236
            HG+ K  KKER LLL IF SS+P +WIN S
Sbjct: 274 DHGVLKAGKKERRLLLQIFGSSLPSQWINGS 301

The following BLAST results are available for this feature:

BLAST of CmoCh11G020480 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G020480 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XB29_PRUPE	3.3e-27	45.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1	[more]
E0CU37_VITVI	3.7e-26	45.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=...	[more]
A5AM71_VITVI	1.1e-25	40.76	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1	[more]
A9PJK4_9ROSI	8.5e-23	41.53	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9GT26_POPTR	2.5e-22	41.53	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1	[more]

BLAST of CmoCh11G020480 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06500.1	9.3e-13	31.82	unknown protein	[more]

BLAST of CmoCh11G020480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|645246608\|ref\|XP_008229431.1\|	4.8e-27	44.44	PREDICTED: uncharacterized protein LOC103328797 [Prunus mume]	[more]
gi\|595927153\|ref\|XP_007215066.1\|	4.8e-27	45.03	hypothetical protein PRUPE_ppa012313mg [Prunus persica]	[more]
gi\|731409249\|ref\|XP_010657121.1\|	5.3e-26	45.76	PREDICTED: protein NLP3 [Vitis vinifera]	[more]
gi\|470136188\|ref\|XP_004303879.1\|	9.0e-26	45.34	PREDICTED: uncharacterized protein LOC101310432 [Fragaria vesca subsp. vesca]	[more]
gi\|147810074\|emb\|CAN71458.1\|	1.5e-25	40.76	hypothetical protein VITISV_007604 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G020480.1	CmoCh11G020480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 65..234 score: 4.3
None	No IPR available	PANTHER	PTHR32002:SF14	SUBFAMILY NOT NAMED	coord: 65..234 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G020480	Cla005513	Watermelon (97103) v1	cmowmB066
CmoCh11G020480	ClCG09G022520	Watermelon (Charleston Gray)	cmowcgB067
CmoCh11G020480	Lsi11G016260	Bottle gourd (USVL1VR-Ls)	cmolsiB087
CmoCh11G020480	Cp4.1LG04g02410	Cucurbita pepo (Zucchini)	cmocpeB126
CmoCh11G020480	Cla97C09G184050	Watermelon (97103) v2	cmowmbB131
CmoCh11G020480	Bhi05G001755	Wax gourd	cmowgoB0117
CmoCh11G020480	Carg04670	Silver-seed gourd	carcmoB0523

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G020480	Silver-seed gourd	carcmoB0038
CmoCh11G020480	Silver-seed gourd	carcmoB0457
CmoCh11G020480	Silver-seed gourd	carcmoB0722
CmoCh11G020480	Cucumber (Chinese Long) v3	cmocucB0151
CmoCh11G020480	Cucumber (Chinese Long) v3	cmocucB0156
CmoCh11G020480	Watermelon (97103) v2	cmowmbB090
CmoCh11G020480	Wax gourd	cmowgoB0127
CmoCh11G020480	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh11G020480	Cucurbita moschata (Rifu)	cmocmoB114
CmoCh11G020480	Cucurbita moschata (Rifu)	cmocmoB121
CmoCh11G020480	Cucumber (Gy14) v1	cgycmoB0289
CmoCh11G020480	Cucumber (Gy14) v1	cgycmoB0664
CmoCh11G020480	Cucurbita maxima (Rimu)	cmacmoB113
CmoCh11G020480	Cucurbita maxima (Rimu)	cmacmoB492
CmoCh11G020480	Cucurbita maxima (Rimu)	cmacmoB539
CmoCh11G020480	Cucurbita maxima (Rimu)	cmacmoB576
CmoCh11G020480	Wild cucumber (PI 183967)	cmocpiB129
CmoCh11G020480	Wild cucumber (PI 183967)	cmocpiB132
CmoCh11G020480	Cucumber (Chinese Long) v2	cmocuB129
CmoCh11G020480	Cucumber (Chinese Long) v2	cmocuB133
CmoCh11G020480	Melon (DHL92) v3.5.1	cmomeB078
CmoCh11G020480	Melon (DHL92) v3.5.1	cmomeB092
CmoCh11G020480	Watermelon (Charleston Gray)	cmowcgB090
CmoCh11G020480	Watermelon (97103) v1	cmowmB112
CmoCh11G020480	Cucurbita pepo (Zucchini)	cmocpeB093
CmoCh11G020480	Cucurbita pepo (Zucchini)	cmocpeB101
CmoCh11G020480	Cucurbita pepo (Zucchini)	cmocpeB132
CmoCh11G020480	Bottle gourd (USVL1VR-Ls)	cmolsiB078
CmoCh11G020480	Cucumber (Gy14) v2	cgybcmoB695
CmoCh11G020480	Cucumber (Gy14) v2	cgybcmoB878
CmoCh11G020480	Melon (DHL92) v3.6.1	cmomedB084
CmoCh11G020480	Melon (DHL92) v3.6.1	cmomedB098