Lsi11G016260.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G016260.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	chr11 : 24613189 .. 24614861 (+)
Sequence length	759

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGGTATATTAGCGGTTTCATGTTGGATTAGTTCCGCATAAGAATGTAATTGAACCAAACATTTTGGCAATTAGATGTTTCCGGAGTTGTGGACGTATATAATGGCTTTATCTTTGTGATCAATTTCGGTACAATTTACATTTTTGCTTTCTGAGTTGCTACAAATTGTTTCAAAATTGGAGAAATTTTGATATACCTATCGCTGTTAGTTGGTCGATGCCTTCGATTATTGGGCCAATCTATGGTAATTACGAACTAGTTACTTCTATTCGTTTCTTTGTTACACTTAGTATGTAAAGACTAAAGAGCGAGTGTGTTATGCTTGCATTAACAGGAGATATATTGTTTGCTTTTGCATCACCTGCATCAGATGTATTTTTCATATTGCAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTGTATGCATCGGATAATCTATTGAATTTCAAATAAATCAATGTTACCAACTTAGTATTTGATGGTCACTAATATTTTTGACATCGTTGTTATCCATTATATTTGAAATAAAAATAAAAATGTTTGTAGTTTATATCTATTTGGCCATCTCTGTTCTTCTTGAGAGGTTTAGTTCACAATCCATCTGCCCTTTCTTCCAACTGAAGTTTGCATTTACTGAGACTTGAGAGGTTCTCCTTGGTTCAACAGTTTACTTAGACTTGAGAAGTTTGCATTTAATGAATGTTTTGTTGTAATTGTGTCTCTAATCATGCTGTTGATAGTTCCTTTTGTTTTCGTATGTTATCAAAGTTTTATCTGGACAATATTTTTGTGAAATATAATTTTGCTGGCATTTGGGTTTAGTGATAGTTGTATAAGACATTTTGCTGTATTTCTCTTGTAATAATGCTTTTTGGATTTCATGCATACTACTAAACTAACAACTTCTATTCCTCTTTCTCACTTTCACTTTTATCATCCTACTCAGTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

mRNA sequence

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Coding sequence (CDS)

ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCCGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTGCTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA

Protein sequence

MCEIKPEEKGILRCRPTDLSTAIPAAALVRVTASSRPPLLFLTPSPNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

Homology

[Close]

BLAST of Lsi11G016260.1 vs. TrEMBL
Match: A5AM71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 126 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 185

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 186 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 245

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 246 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]

BLAST of Lsi11G016260.1 vs. TrEMBL
Match: E0CU37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]

BLAST of Lsi11G016260.1 vs. TrEMBL
Match: M5XB29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1


Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD--ETNN 160
           QQ G+ N Q  R QNV + +  +G  + DEFK+GFPS GL + SNKWWGS+  D  E+  
Sbjct: 14  QQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 GE-----DDKHH--FKVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVERG 220
           GE     +DK H   K+ +DG  S ++D+EK ES +E+     QGT LL A+RK S+E G
Sbjct: 74  GEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLLMAVRKGSLEEG 133

Query: 221 RKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
           +K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 QKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]

BLAST of Lsi11G016260.1 vs. TrEMBL
Match: A9PJK4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-22
Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R   + +    +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHIMLTPGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLD----------ETNNGEDDKHHFKVVNDGFISLIDQEKS 192
           YGFPS GL + +NKWWGSS  D          ET+  +  +   KV     + ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+VE GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVY-RTYGVNKLGRKQRALLLRIFG 259

[Close]

BLAST of Lsi11G016260.1 vs. TrEMBL
Match: B9GT26_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 1


Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R     +    +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHITLTPGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLD----------ETNNGEDDKHHFKVVNDGFISLIDQEKS 192
           YGFPS GL + +NKWWGSS  D          ET+  +  +   KV     + ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+ E GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVY-RTYGVNKLGRKQRALLLRIFG 259

[Close]

BLAST of Lsi11G016260.1 vs. TAIR10
Match: AT1G06500.1 (AT1G06500.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 118 STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLI 177
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRAEKGGREDGGGEN-----TENGHVAAC 80

Query: 178 DQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLL 237
           D+ ++                L A+RKR  E GR+ ++ G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 131

Query: 238 NIFRSSTPNEWM 250
            IF S+ P +W+
Sbjct: 141 QIFNSAMPKDWV 131

[Close]

BLAST of Lsi11G016260.1 vs. NCBI nr
Match: gi|147810074|emb|CAN71458.1| (hypothetical protein VITISV_007604 [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 126 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 185

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 186 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 245

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 246 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 301

[Close]

BLAST of Lsi11G016260.1 vs. NCBI nr
Match: gi|731409249|ref|XP_010657121.1| (PREDICTED: protein NLP3 [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 88  KMSKLNGA-PQSLQQQLGNINTQMRRSQNVQSTNWVQG-PLSLDEFKYGFPSGGLPSISN 147
           KMSKL+GA P  + QQ G+ N Q  R QN+ + +  +G   SLDEFKYGFP+ GL + SN
Sbjct: 115 KMSKLHGAIPPHMLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASN 174

Query: 148 KWWGSSCLD----ETNNG----EDDKHHFKVVNDGFISLI--DQEKSESIEEDLQADLQG 207
           KWWGSS  D       NG    E+DK   + + D   +L+  D EK+E+ +E+     QG
Sbjct: 175 KWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQG 234

Query: 208 TRLLTALRKRSVERGRKVLKHG-NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS 253
           T LLTA+RK +VE GRK+LK G    HG  + K  KKE+ LLL IF SS P++W+N S
Sbjct: 235 TGLLTAVRKTTVEEGRKILKIGVGRDHG--VLKAGKKERRLLLQIFGSSLPSQWINGS 290

[Close]

BLAST of Lsi11G016260.1 vs. NCBI nr
Match: gi|743840593|ref|XP_011026245.1| (PREDICTED: uncharacterized protein LOC105126913 [Populus euphratica])

HSP 1 Score: 116.7 bits (291), Expect = 5.9e-23
Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 73  IATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFK 132
           IA + K  NK  + ++ ++ N  P  LQQQ G  +  + R     ++   +G + LDEFK
Sbjct: 80  IADLAKAANKSGIQQQNNE-NSKPHKLQQQ-GTKDVLVGRQHITLTSGLAKGLMGLDEFK 139

Query: 133 YGFPSGGLPSISNKWWGSSCLDE--------TNNGEDDKHHFKVVNDGFIS--LIDQEKS 192
           YGFPS GL + +NKWWGSS  D         T   EDD H  +   D   S  ++D+EK 
Sbjct: 140 YGFPSDGLSTATNKWWGSSLSDTQRATDRAGTETDEDDGHQSEEKADAGTSVVIVDEEKG 199

Query: 193 ESIE-EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFR 252
           E+ + E  + D QGT LLT++RKR+VE GR+ LK G Y     +NKL +K+++LLL IF 
Sbjct: 200 ENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVY-RAYGVNKLGRKQRALLLRIFG 259

[Close]

BLAST of Lsi11G016260.1 vs. NCBI nr
Match: gi|595927153|ref|XP_007215066.1| (hypothetical protein PRUPE_ppa012313mg [Prunus persica])

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1


Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD--ETNN 160
           QQ G+ N Q  R QNV + +  +G  + DEFK+GFPS GL + SNKWWGS+  D  E+  
Sbjct: 14  QQQGSKNVQTGRPQNVLTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 GE-----DDKHH--FKVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVERG 220
           GE     +DK H   K+ +DG  S ++D+EK ES +E+     QGT LL A+RK S+E G
Sbjct: 74  GEGAETDEDKKHQSEKLADDGASSTVVDKEKCESGKEE-NISTQGTDLLMAVRKGSLEEG 133

Query: 221 RKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
           +K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 QKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPKQWIH 171

[Close]

BLAST of Lsi11G016260.1 vs. NCBI nr
Match: gi|645246608|ref|XP_008229431.1| (PREDICTED: uncharacterized protein LOC103328797 [Prunus mume])

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-22
Identity = 71/162 (43.83%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 101 QQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLD------ 160
           QQ G+ N Q  R QN+ + +  +G  + DEFK+GFPS GL + SNKWWGS+  D      
Sbjct: 14  QQQGSKNVQTGRPQNILTLSLTKGNTTYDEFKHGFPSDGLSTASNKWWGSNSPDGYESVR 73

Query: 161 ----ETNNGEDDKHHF-KVVNDGFIS-LIDQEKSESIEEDLQADLQGTRLLTALRKRSVE 220
               ET+ G+  KH   K+ +DG  S ++D+EK ES +E+     +GT LL A+RKRS+E
Sbjct: 74  GQGAETDEGK--KHQSEKLADDGASSTVVDREKCESGKEE-NISSKGTDLLMAVRKRSLE 133

Query: 221 RGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMN 251
            G+K LK G +  G    KL ++E++LLL IF+SSTP +W++
Sbjct: 134 EGQKALKLGVF-RGYGAKKLGRRERALLLRIFKSSTPEQWIH 171

The following BLAST results are available for this feature:

BLAST of Lsi11G016260.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G016260.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A5AM71_VITVI	1.7e-24	47.19	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1	[more]
E0CU37_VITVI	1.7e-24	47.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=...	[more]
M5XB29_PRUPE	2.0e-22	45.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1	[more]
A9PJK4_9ROSI	5.9e-22	38.95	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9GT26_POPTR	2.9e-21	38.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1	[more]

BLAST of Lsi11G016260.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06500.1	1.3e-12	31.06	unknown protein	[more]

BLAST of Lsi11G016260.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147810074\|emb\|CAN71458.1\|	2.4e-24	47.19	hypothetical protein VITISV_007604 [Vitis vinifera]	[more]
gi\|731409249\|ref\|XP_010657121.1\|	2.4e-24	47.19	PREDICTED: protein NLP3 [Vitis vinifera]	[more]
gi\|743840593\|ref\|XP_011026245.1\|	5.9e-23	40.53	PREDICTED: uncharacterized protein LOC105126913 [Populus euphratica]	[more]
gi\|595927153\|ref\|XP_007215066.1\|	2.9e-22	45.63	hypothetical protein PRUPE_ppa012313mg [Prunus persica]	[more]
gi\|645246608\|ref\|XP_008229431.1\|	6.5e-22	43.83	PREDICTED: uncharacterized protein LOC103328797 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G016260	Lsi11G016260	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G016260.1.CDS.1	Lsi11G016260.1.CDS.1	CDS
Lsi11G016260.1.CDS.2	Lsi11G016260.1.CDS.2	CDS
Lsi11G016260.1.CDS.3	Lsi11G016260.1.CDS.3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G016260.1	Lsi11G016260.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 101..251 score: 1.2
None	No IPR available	PANTHER	PTHR32002:SF14	SUBFAMILY NOT NAMED	coord: 101..251 score: 1.2