Lsi11G016380 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAACCTCAAATTCAAACTCTCAAACAAACAACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCCTCATCGACGCCGGAGCCGGAGAAGAGTATCGACCACCCGCATTGCCGAGAAGATTCACCGAAACGACGCTGTTTACGCCTCCGAAGAAGCCGATGAGAAGGAAGCCATCGAACGCAAGATTCGCGCCTTGCAGAGCATCGTTCCAGGAGGGGAATCGCTTGGAGTCGACAAGCTGTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTTAAGGCCATGAGAGCACTCTCGAGCTTTTTCGAAAGCTTGGAGAAGGAGAAATCCAAGTGTGGAGGTTGA ATGGACAAACCTCAAATTCAAACTCTCAAACAAACAACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCCTCATCGACGCCGGAGCCGGAGAAGAGTATCGACCACCCGCATTGCCGAGAAGATTCACCGAAACGACGCTGTTTACGCCTCCGAAGAAGCCGATGAGAAGGAAGCCATCGAACGCAAGATTCGCGCCTTGCAGAGCATCGTTCCAGGAGGGGAATCGCTTGGAGTCGACAAGCTGTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTTAAGGCCATGAGAGCACTCTCGAGCTTTTTCGAAAGCTTGGAGAAGGAGAAATCCAAGTGTGGAGGTTGA ATGGACAAACCTCAAATTCAAACTCTCAAACAAACAACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCCTCATCGACGCCGGAGCCGGAGAAGAGTATCGACCACCCGCATTGCCGAGAAGATTCACCGAAACGACGCTGTTTACGCCTCCGAAGAAGCCGATGAGAAGGAAGCCATCGAACGCAAGATTCGCGCCTTGCAGAGCATCGTTCCAGGAGGGGAATCGCTTGGAGTCGACAAGCTGTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTTAAGGCCATGAGAGCACTCTCGAGCTTTTTCGAAAGCTTGGAGAAGGAGAAATCCAAGTGTGGAGGTTGA MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSKCGG
BLAST of Lsi11G016380 vs. Swiss-Prot
Match: PAR1_ARATH (Transcription factor PAR1 OS=Arabidopsis thaliana GN=PAR1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.1e-13 Identity = 40/99 (40.40%), Postives = 67/99 (67.68%), Query Frame = 1
BLAST of Lsi11G016380 vs. Swiss-Prot
Match: PAR2_ARATH (Transcription factor PAR2 OS=Arabidopsis thaliana GN=PAR2 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.8e-12 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 1
BLAST of Lsi11G016380 vs. TrEMBL
Match: A0A0A0KGU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423410 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.0e-51 Identity = 112/125 (89.60%), Postives = 117/125 (93.60%), Query Frame = 1
BLAST of Lsi11G016380 vs. TrEMBL
Match: I1M6X1_SOYBN (BHLH transcription factor OS=Glycine max GN=Glyma14g03180.1 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.4e-18 Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1
BLAST of Lsi11G016380 vs. TrEMBL
Match: W9RT05_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021396 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.7e-18 Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1
BLAST of Lsi11G016380 vs. TrEMBL
Match: I1JJ47_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G286900 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17 Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 1
BLAST of Lsi11G016380 vs. TrEMBL
Match: C6SXX6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17 Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 1
BLAST of Lsi11G016380 vs. TAIR10
Match: AT2G42870.1 (AT2G42870.1 phy rapidly regulated 1) HSP 1 Score: 75.1 bits (183), Expect = 3.4e-14 Identity = 40/99 (40.40%), Postives = 67/99 (67.68%), Query Frame = 1
BLAST of Lsi11G016380 vs. TAIR10
Match: AT3G58850.1 (AT3G58850.1 phy rapidly regulated 2) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 1
BLAST of Lsi11G016380 vs. NCBI nr
Match: gi|449444983|ref|XP_004140253.1| (PREDICTED: transcription factor PAR2-like [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 1.5e-51 Identity = 112/125 (89.60%), Postives = 117/125 (93.60%), Query Frame = 1
BLAST of Lsi11G016380 vs. NCBI nr
Match: gi|659097277|ref|XP_008449537.1| (PREDICTED: transcription factor PAR2-like [Cucumis melo]) HSP 1 Score: 205.7 bits (522), Expect = 4.8e-50 Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 1
BLAST of Lsi11G016380 vs. NCBI nr
Match: gi|1009126581|ref|XP_015880233.1| (PREDICTED: transcription factor PAR1 [Ziziphus jujuba]) HSP 1 Score: 102.1 bits (253), Expect = 7.4e-19 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1
BLAST of Lsi11G016380 vs. NCBI nr
Match: gi|571506777|ref|XP_006595753.1| (PREDICTED: transcription factor PAR1-like [Glycine max]) HSP 1 Score: 99.4 bits (246), Expect = 4.8e-18 Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1
BLAST of Lsi11G016380 vs. NCBI nr
Match: gi|703120720|ref|XP_010102162.1| (hypothetical protein L484_021396 [Morus notabilis]) HSP 1 Score: 98.6 bits (244), Expect = 8.2e-18 Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |