CmoCh11G020370 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAATCCCAAATTCAAAGACTCAAACTCGCCATTCAGACCAAGCGAACCACCACTCCTCGCCATAAAGCCCTAATCCTCAACGCATTGCATAAATCTCCTCTCAATCGCAACGCCCGCCGCCGGAGACGCACAAAACCCACCCGCATTGCCTCCGGAAAAGCCGAGGAGAAGGAGGCCGTCGAACGGAAGATTCGCGCGTTGCAGACCATCGTCCCGGGAGGGGAATCGCTCGGAGTTGACAAACTATTCGAACAGACGGCGGAGTATATCATGAATTTGCAGCATCAAGTGAAGGCCATGAGAGCGCTGTCGAGCTTCTTCGAAAGCTTGGAGAAGGAGAAGAGCAAGTGCGGCGGAGGTTGA ATGGGGAAATCCCAAATTCAAAGACTCAAACTCGCCATTCAGACCAAGCGAACCACCACTCCTCGCCATAAAGCCCTAATCCTCAACGCATTGCATAAATCTCCTCTCAATCGCAACGCCCGCCGCCGGAGACGCACAAAACCCACCCGCATTGCCTCCGGAAAAGCCGAGGAGAAGGAGGCCGTCGAACGGAAGATTCGCGCGTTGCAGACCATCGTCCCGGGAGGGGAATCGCTCGGAGTTGACAAACTATTCGAACAGACGGCGGAGTATATCATGAATTTGCAGCATCAAGTGAAGGCCATGAGAGCGCTGTCGAGCTTCTTCGAAAGCTTGGAGAAGGAGAAGAGCAAGTGCGGCGGAGGTTGA ATGGGGAAATCCCAAATTCAAAGACTCAAACTCGCCATTCAGACCAAGCGAACCACCACTCCTCGCCATAAAGCCCTAATCCTCAACGCATTGCATAAATCTCCTCTCAATCGCAACGCCCGCCGCCGGAGACGCACAAAACCCACCCGCATTGCCTCCGGAAAAGCCGAGGAGAAGGAGGCCGTCGAACGGAAGATTCGCGCGTTGCAGACCATCGTCCCGGGAGGGGAATCGCTCGGAGTTGACAAACTATTCGAACAGACGGCGGAGTATATCATGAATTTGCAGCATCAAGTGAAGGCCATGAGAGCGCTGTCGAGCTTCTTCGAAAGCTTGGAGAAGGAGAAGAGCAAGTGCGGCGGAGGTTGA
BLAST of CmoCh11G020370 vs. Swiss-Prot
Match: PAR2_ARATH (Transcription factor PAR2 OS=Arabidopsis thaliana GN=PAR2 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
BLAST of CmoCh11G020370 vs. Swiss-Prot
Match: PAR1_ARATH (Transcription factor PAR1 OS=Arabidopsis thaliana GN=PAR1 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11 Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TrEMBL
Match: A0A0A0KGU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423410 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 4.7e-33 Identity = 92/132 (69.70%), Postives = 98/132 (74.24%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TrEMBL
Match: W9RT05_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021396 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-17 Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TrEMBL
Match: A0A0B2PW36_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_019931 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16 Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TrEMBL
Match: I1JJ47_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G286900 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TrEMBL
Match: C6SXX6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TAIR10
Match: AT3G58850.1 (AT3G58850.1 phy rapidly regulated 2) HSP 1 Score: 73.9 bits (180), Expect = 7.5e-14 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TAIR10
Match: AT2G42870.1 (AT2G42870.1 phy rapidly regulated 1) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12 Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 1
BLAST of CmoCh11G020370 vs. TAIR10
Match: AT3G05800.1 (AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1) HSP 1 Score: 48.5 bits (114), Expect = 3.4e-06 Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 1
BLAST of CmoCh11G020370 vs. NCBI nr
Match: gi|659097277|ref|XP_008449537.1| (PREDICTED: transcription factor PAR2-like [Cucumis melo]) HSP 1 Score: 149.1 bits (375), Expect = 5.2e-33 Identity = 92/133 (69.17%), Postives = 98/133 (73.68%), Query Frame = 1
BLAST of CmoCh11G020370 vs. NCBI nr
Match: gi|449444983|ref|XP_004140253.1| (PREDICTED: transcription factor PAR2-like [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 6.8e-33 Identity = 92/132 (69.70%), Postives = 98/132 (74.24%), Query Frame = 1
BLAST of CmoCh11G020370 vs. NCBI nr
Match: gi|703120720|ref|XP_010102162.1| (hypothetical protein L484_021396 [Morus notabilis]) HSP 1 Score: 95.9 bits (237), Expect = 5.2e-17 Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 1
BLAST of CmoCh11G020370 vs. NCBI nr
Match: gi|470140199|ref|XP_004305830.1| (PREDICTED: transcription factor PAR1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 95.5 bits (236), Expect = 6.8e-17 Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 1
BLAST of CmoCh11G020370 vs. NCBI nr
Match: gi|734348775|gb|KHN11958.1| (hypothetical protein glysoja_019931 [Glycine soja]) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16 Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |