CmoCh14G005660 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G005660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CRS1/YhbY (CRM) domain protein
Location	Cmo_Chr14 : 2880620 .. 2884475 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATAAACGTTAGCGCCACCTCGCCCTGCTCCATCTCTACCTAGAGTCGACTTGTTATCGGTTCGAGCCGACTCCTATTGGCTTGGGTTCAGCTCTCGCACCAATTCTCACCACCGTGGCTCACCATCGATCTCTCTCTCTCTCTCTCTCTGCGCAGGGTTTAGTCTCATTCACACTACCGTCGATTCTCTCTCCCAGCGTTGCCGTCGGTTGCTTTGACACGCGGCTGGTCTCTCGGATTCCCGCTTCCTCTAGGGACAGCACCGATATCCTCAGGTACAAGTTTTTCTGGGTTTTAAATTTCTTTTTAAGTTCGAGGAACTTGGAATTGTGATTTTCTTTGATTAGTGAGTGTGCAAACGGATGATTTGGATTTTTTGTGGTTTTTTCCCCTTAGATGTTAAGATAATGAGATGAAATTTCTGGTATTACCTTTTGTCTGAGCTTTCTATATCGTTTCATTGTTAAATATTGCAAGTGATTATTAAAACTGTGGGAACAAAACTTGATTAATCGTCTTCAAATTTATAGTGAGAAATGCCTAGGGGGATTTCTTTCTCATGTAATTTTCTTCTGTTCTAGTTAAAATGAAATAGGAGAAAGCAGAAATTTATCGAACCCAATCACTTAACTGGACTACGAGTGTGTAATTGTTTTTGGTTCGGCTCAGGTTTCATTTGAAAATGTCAGTGTGGCTCAATCTAGTTTAGTATGTAAGGGTTTGGTGAATCGGTCTGATATCCAAGTTCTTTGTTGCCCATTGGTATGATTTGTAACTGATTGGGAACTATTGCATTGGAGCTGCTAATGTATGAAGTTATTTGATTAATTATGAAATAAATTTATTTCCATTGTTTAAAAGTCTTTGAATTGAAAGTTGTACATGATGAAATAAGAACTTTTTAAGGATTTTGATCAAACTTGTTTTGAATTATCGAGTTGCAGATACTTTCCACGAGTATGCTTTGTTCTTCGTTAAATTTATCTTTATTGTTTCCTTTTTCTTTTGCAGCATATTCAAATGAAATTATGGTCGCGTGACAACTAACTATGCTACAAGAAATATAGTTATATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGGTACTTTTCAGTCAAGGTTCCTCCATCTTCTTAATATTATCGATGTGTTGTACTTTTGAACAGCAGTTTTCATCTTCTTTTCCTTAGATTTTCCACTCTAGTGATAAATTTCTTTGTTGATCCATTGCTTTCAAAAAAATTTAACCTAGCCAACCGGGTTTGAGATTGGAAGAAAATGGCTTGTATTTGACTTTGAAAGACAGAAATAGTGTAGAATATATAACTTTTGATGAATTTTCTGGTTGAATTTTACTGTGTTTACATCATATATTCTGTTGCAGACCTGTTCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAAACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCAAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGATAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGGTAAGTAAAAAAAGAATGGTTTCAGAATGTTATATGGGTCTATATTGTTAAAGTCCAGCTTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTTATGAGCATTTCTCTTCATTCTGCTGCTGAACTGCAGCGAGATGGTTTTCAAATTAATGGATGTTGGAAATTTTTCATATGATTTCAGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCATTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTTAGTTTTTAAAATTTTCAGTTTTCATTAATGTATATGATGTCTTTTTCTTTTCTTTCTCTTTTTTATAATCGGAGTTCGTGGGCCAGTGCATCTTTATTTAAGACATAATAGTACGGGAGGATATCAGTAGGACTATTTGGCTTTTCGACCATAAAATATGTGCGTGGGAGTCGGCTGTGTAGTTAAGTAATGGTATTGAAGTTAGAGAAGTGTGAGTTTCTCCTAAGCATATACTTTTCGTTTTTGGATTGATGGAGTGTCAAATACATGGGAGGGAGAATTCAATCCTCTCCGGAGAGTGTAACGGCCCAAGCCCACTGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTTGGGCTTTTCCTCAAGGTTCTTAAGGCACGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGAAGCTTTCGTTCTCCTCTCCAACTGATGTGGGTCTCACAGGGAGTTTGTCAAGTTTTGACTCTTGTTGTGTGATTCCTATCAAGCTGTCAGTGTCGGTACCTAGAAAATAGTGCAGCTTTTCCATTTTCATGTTTAGATTAGCTTGATCAGAGAATAACGTGCTGACATTAGATTGTTGTACGAAAAGCTTTCATTTAACAGCAAATACCAAATGTTGCAAACTTGGTCTGTCTAATTAGATTTAATAGTTGTGTTATGGTATTGTTGGCCTTTTGTTATCCAATCTGTTTGCTGCATGTATGCTTAAAACCTCAATGTTCATGTTTATGTGGATTCTGTTTGTAGGAAATTGATTATTAATAAAACATACCAATGGCTTCCCTCCTTGCAGGCACTAGAAAAGTCCAAGTACGAGCAGTCCCTCGAGTCTGTTCGCCGATTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAACTCACTGAAACATCAAGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCATTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAATCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGAGACTGCAACCTGATTTTTTGTTCGACTTCAATGGATCTATGATCCAATGAAAACATGAGTTCATAGATGTATACCCAAACATTTTCAGAAATTATAGTAACTAACCGTTTCTAAGATGATATGAGCATGGGAAAATTTGAC

mRNA sequence

ATGAAATAAACGTTAGCGCCACCTCGCCCTGCTCCATCTCTACCTAGAGTCGACTTGTTATCGGTTCGAGCCGACTCCTATTGGCTTGGGTTCAGCTCTCGCACCAATTCTCACCACCGTGGCTCACCATCGATCTCTCTCTCTCTCTCTCTCTGCGCAGGGTTTAGTCTCATTCACACTACCGTCGATTCTCTCTCCCAGCGTTGCCGTCGGTTGCTTTGACACGCGGCTGGTCTCTCGGATTCCCGCTTCCTCTAGGGACAGCACCGATATCCTCAGCATATTCAAATGAAATTATGGTCGCGTGACAACTAACTATGCTACAAGAAATATAGTTATATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGACCTGTTCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAAACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCAAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGATAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGTCCAGCTTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTTATGAGCATTTCTCTTCATTCTGCTGCTGAACTGCAGCGAGATGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCATTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCACTAGAAAAGTCCAAGTACGAGCAGTCCCTCGAGTCTGTTCGCCGATTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAACTCACTGAAACATCAAGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCATTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAATCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGAGACTGCAACCTGATTTTTTGTTCGACTTCAATGGATCTATGATCCAATGAAAACATGAGTTCATAGATGTATACCCAAACATTTTCAGAAATTATAGTAACTAACCGTTTCTAAGATGATATGAGCATGGGAAAATTTGAC

Coding sequence (CDS)

ATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGACCTGTTCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAAACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCAAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGATAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGTCCAGCTTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTTATGAGCATTTCTCTTCATTCTGCTGCTGAACTGCAGCGAGATGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCATTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCACTAGAAAAGTCCAAGTACGAGCAGTCCCTCGAGTCTGTTCGCCGATTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAACTCACTGAAACATCAAGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCATTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAATCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGA

Homology

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BLAST of CmoCh14G005660 vs. Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.5e-38
Identity = 102/238 (42.86%), Postives = 140/238 (58.82%), Query Frame = 1


Query: 183 LLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVF 242
           L +AR KE  L+E +K+ E         +P  LT EE FY  KMG K  NYVP+GRRG++
Sbjct: 145 LRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIY 204

Query: 243 GGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKE 302
            GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK 
Sbjct: 205 QGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKN 264

Query: 303 YVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 362
           YVQP  E+MSP  TL +K+AL+KSK   +L +VR++I   E+EL+L     A      D 
Sbjct: 265 YVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRDY 324

Query: 363 NPLSILDLP--SDNLKNSLKHQVDEMEDSH---SAALCLASDVMNKRNPEFSDDESLE 414
             + + D    S+ LK  ++   + +ED      A L LA+D  +  +  F  D  LE
Sbjct: 325 TNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLELATD--SDLSDIFETDSELE 377

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BLAST of CmoCh14G005660 vs. Swiss-Prot
Match: CFM2_ARATH (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.9e-20
Identity = 89/371 (23.99%), Postives = 167/371 (45.01%), Query Frame = 1


Query: 124 KFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVIL 183
           K +  EE IK +  K  +     +    + + Q K     S      A L++    + + 
Sbjct: 494 KLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNS----PEAILEKTSMKLSMA 553

Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ +     ++  L+  E P++    ++   +T +E++ ++K+G K   ++ +GRRGVF 
Sbjct: 554 LEKKANAEKVLADLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFD 613

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRG 303
           G I NMH+HWK  E VK+ C        H+ A+ +   SGGI +    +     II YRG
Sbjct: 614 GTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRG 673

Query: 304 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND- 363
           K Y +P+ + P   LSK+ AL++S   Q  +S++  +      +E   R +      N+ 
Sbjct: 674 KNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNET 733

Query: 364 ----RNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIG 423
                +   +++  ++N     +   +++E  +S+ L + S          S +E+ E  
Sbjct: 734 WSDGESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPS----------SGEENWEDD 793

Query: 424 EEFADSCFSTSESEFESDILDDFEHGRIEGS----------FSQTGEMSSTTMNTCSASQ 477
            E      +TS  E++ D  +     R EG+          F++TG  ++++ +  S   
Sbjct: 794 SEGEVDPLTTSSQEYQEDESESASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPH 848

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BLAST of CmoCh14G005660 vs. Swiss-Prot
Match: CFM3B_ARATH (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana GN=CFM3B PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 70/234 (29.91%), Postives = 113/234 (48.29%), Query Frame = 1


Query: 215 LTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEY 274
           +T EERF  +K+G K   ++ +GRRGVF G + NMH+HWK  E +K+  K        + 
Sbjct: 665 ITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKV 724

Query: 275 AQEIARLSGGIPI---QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLE 334
           A  +   SGGI +   +I     +I YRGK+Y +P  + P + L+K++AL +S   Q  E
Sbjct: 725 AMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKRE 784

Query: 335 SVRRFIAIAE---KELELYYRHVALYGDPNDRNPLSILDLPSDNLKNS-----------L 394
           ++ + I   +   ++L      V L  D  D      LD+   + + +           L
Sbjct: 785 ALIKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLDMAYSSDEETEETDGEEDDVYL 844

Query: 395 KHQVDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGEEFADSCFSTSESEF 431
               DE ED     +  A+  +++ + EF  DES  + G+  A S  +T E+ F
Sbjct: 845 DTYEDEGEDDEEGGI-QANGSLSETDVEFGSDESDTDFGDNSASS--TTPETTF 895

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BLAST of CmoCh14G005660 vs. Swiss-Prot
Match: CFM3A_ARATH (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CFM3A PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.1e-17
Identity = 67/230 (29.13%), Postives = 111/230 (48.26%), Query Frame = 1


Query: 211 EPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQ 270
           +P ++T EERF  +K+G K   ++ +GRRGVF G + NMH+HWK  E VK+  K      
Sbjct: 634 DPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 693

Query: 271 VHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYE 330
           V + A  +   SGGI +   ++     II YRG++Y +P ++ P + L+K++AL +S   
Sbjct: 694 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIEL 753

Query: 331 QSLESVRRFIAIAE---KELELYYRHVALYGDPNDRNPLSILDLPSDNLKNSLKHQVDEM 390
           Q  E + + I+  +   K+L      +    D  D    + LD+       S   + DE 
Sbjct: 754 QRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDM----AYASSDEETDEE 813

Query: 391 EDSHSAALCLASDVMNKRNPE-FSDDESLEIGEEFADSCFSTSESEFESD 434
           +D  +              PE +++ E  E GE  A     T + + +S+
Sbjct: 814 DDDDAF-------------PETYAEGEDGEEGEILAGELSETEDKDLDSN 846

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BLAST of CmoCh14G005660 vs. Swiss-Prot
Match: CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CFM3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-16
Identity = 81/308 (26.30%), Postives = 143/308 (46.43%), Query Frame = 1


Query: 171 AELQRDVTVIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKR 230
           A+L R +   + L Q +I++A  +       +   +G +  P  +T EERF  +K+G + 
Sbjct: 549 ADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEG-IQPPETITDEERFMFRKLGLRM 608

Query: 231 SNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI--- 290
             ++ +GRRGVF G I NMH+HWK  E VK+  K    G V + A  +   SGGI +   
Sbjct: 609 KAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVD 668

Query: 291 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 350
           ++     I+ +RGK+Y +P  + P + LSK++AL +S   Q  E++   IA   + ++  
Sbjct: 669 KVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKL 728

Query: 351 YRHVALYGDPNDRNPLSILDLPSDNLKNSLKHQVDEMED-------SHSAALCLASDVMN 410
              +       +   +  L    D+  +S +  V++ +D        +S A+    D  +
Sbjct: 729 KAELLQMEGVKEEGDVE-LYAKLDSAYSSDEEDVEDEDDEAYLRSFDNSVAVQNGDDRTS 788

Query: 411 KRNPEFSDDESLEIGEEFADSCFSTSES---EFESDILDDFEHGRIEGS-FSQTGEMSST 465
               + + D+  +  +E  D      E    ++E+D  DD      +G  ++ T   SS 
Sbjct: 789 LDGSDANSDDEGDYSDEDDDEDDDNDEEDGFDYENDDEDDVPPTTSDGDLYNHTDFGSSD 848

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BLAST of CmoCh14G005660 vs. TrEMBL
Match: A0A0A0LF61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823620 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 1.1e-141
Identity = 255/295 (86.44%), Postives = 278/295 (94.24%), Query Frame = 1


Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMGQKRSNYVPIGRRGVFG
Sbjct: 115 LRARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRGVFG 174

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEY 303
           GVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+Y
Sbjct: 175 GVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY 234

Query: 304 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPL 363
           VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDRNPL
Sbjct: 235 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDRNPL 294

Query: 364 SILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCF 423
           SIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FSDDESL+IG+ FAD+CF
Sbjct: 295 SILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFSDDESLDIGDGFADACF 354

Query: 424 STSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           STSES+FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK EFH QELPIH
Sbjct: 355 STSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNKCEFHKQELPIH 408

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BLAST of CmoCh14G005660 vs. TrEMBL
Match: V4T7K8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020228mg PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.2e-116
Identity = 250/469 (53.30%), Postives = 307/469 (65.46%), Query Frame = 1


Query: 5   LFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSYGSVN 64
           LFHNLR+AS L +  SL     R +L  P S      +        P   +RN+S+G+VN
Sbjct: 6   LFHNLRKASALNKFLSL-----RSILRAPQSVLCPYSHLGPPKPINPSWVWRNVSHGTVN 65

Query: 65  LVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQK 124
           LVIS+GKPKFETHEV PPKK+KW+TKK+ K+++KREKQK                     
Sbjct: 66  LVISEGKPKFETHEVHPPKKEKWQTKKRFKLKKKREKQK--------------------- 125

Query: 125 FSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVILL 184
             +A +R   +L                   +KKK  F +       +L+          
Sbjct: 126 RKDANKRDPRRLTVKG---------------KKKKQKFANAEDRIKYKLE---------- 185

Query: 185 QARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGG 244
           +A+IKEALLIERLKRYEVP+VQGPVV+PH LT EERFY KKM QKRSNYVPIGRRGVFGG
Sbjct: 186 KAKIKEALLIERLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRRGVFGG 245

Query: 245 VILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYV 304
           VILNMHMHWKKHETVKVFCKP KPGQ+HE+A+EIARLSGGIPIQIIGDDT+IFYRGK YV
Sbjct: 246 VILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDTVIFYRGKNYV 305

Query: 305 QPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLS 364
           QPE+MSPIDTLSKK+ALEKSKYEQSLESVRRFIA+AEKELELYYRH+ALYGDPN+RNP+S
Sbjct: 306 QPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIALYGDPNNRNPMS 365

Query: 365 ILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCFS 424
           I+D PS   + S K ++ E +   S    L+       +   S D++L   +   D   S
Sbjct: 366 IMDNPSKVTQESWKFKMVERKSLDSTYDALSPGASEAESD--STDQTLSELDYIEDEGLS 421

Query: 425 TSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQ 474
           TSES+ + D   DF+    + S S+  E+S T   + S S+  ++ +NQ
Sbjct: 426 TSESDSQDDSSSDFDSKESQVSSSRMRELSFTMSGSSSMSKTLYDSNNQ 421

[Close]

BLAST of CmoCh14G005660 vs. TrEMBL
Match: A0A059DBD5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00093 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 5.6e-114
Identity = 250/478 (52.30%), Postives = 304/478 (63.60%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MA +   NL RAS L R SS +   FRP+L     + S  K+  L N +     FRNLS+
Sbjct: 1   MASTWLRNLLRASSLLRPSSASASSFRPILLSGRPSLSSSKHLLLGNPANTSWSFRNLSF 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVN V+S+GKPKFETHEVDPPKK+KWK KK+ K+Q+KR                     
Sbjct: 61  GSVNFVLSEGKPKFETHEVDPPKKEKWKNKKRFKLQKKR--------------------- 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
           +KQK   A ++   ++ K                  K+K  F +       +L+      
Sbjct: 121 EKQKRKAANKKDPRRVGK------------------KRKQKFANAEEKIKYKLE------ 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
               +ARIKE LLIE+LK+YEVP+VQGPVV+P NLT EERF++KKMGQK+SNY P+GRRG
Sbjct: 181 ----KARIKETLLIEKLKKYEVPKVQGPVVKPDNLTGEERFFLKKMGQKKSNYAPVGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMHMHWKKHETVKV CKPCKPGQVH+YAQEIARLSGGIPIQIIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIPIQIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           + YVQPE+MSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH ALYGDPN R
Sbjct: 301 RNYVQPEIMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHTALYGDPNSR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNK----RNPEFSDDESLEIGE 420
           NP++IL+ P      S      E+E       C   D +++       +FSD    E  E
Sbjct: 361 NPIAILEGPVQGTMGS-----KEVESLEKERQCATDDSLSRDYSPLESDFSDLSETE-SE 420

Query: 421 EFADSCFSTSESEFESDILDDFEHGRIEGSFSQT-GEMSSTTMNTCSASQNKFEFHNQ 474
           + ++   S  ES+ E     D  + R+ G+FS   G  S   + + SA  +KF  H++
Sbjct: 421 DGSEDDMSIGESDAEYGHTHDISNERV-GNFSGVGGHPSHDLVRSSSADSSKFGNHDK 422

[Close]

BLAST of CmoCh14G005660 vs. TrEMBL
Match: A0A0L9V745_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g164000 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 2.1e-113
Identity = 260/477 (54.51%), Postives = 308/477 (64.57%), Query Frame = 1


Query: 1   MAKSLFHNLRRAS--LLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNL 60
           MA SLF  +RRAS  L F  ++      R V       FS +++   L       G RNL
Sbjct: 1   MATSLFRTIRRASSALRFSYATSFSVSLRSVGRSNMCVFSPLRHRVSLGEQGYRWGLRNL 60

Query: 61  SYGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVK 120
           S+G VNLVI+ GK KFET EV+PPKKDKWKTKK+LKMQRKREK+KRKAAN          
Sbjct: 61  SHGRVNLVITGGKTKFETDEVEPPKKDKWKTKKRLKMQRKREKEKRKAAN---------- 120

Query: 121 GKKKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVT 180
                              K     G+          +KKK  F S           D  
Sbjct: 121 ------------------RKDPRRLGVKG--------KKKKQRFASA----------DER 180

Query: 181 VIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 240
           +   +  ARIKE LLIERLKRYEVP++QGPVV+P +LT EERFY+KKM QKRSNY+ IGR
Sbjct: 181 IKYKIENARIKETLLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQIGR 240

Query: 241 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 300
           RG+FGGV+LNMHMHWKKHETVKV CKPCKPGQVHEYAQE+ARLSGGIP+QIIGDDTIIFY
Sbjct: 241 RGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFY 300

Query: 301 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360
           RG+ Y QP+VMSPIDTLSKK+ALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Sbjct: 301 RGRNYEQPDVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360

Query: 361 DRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGE- 420
           +RNPLS+LD PS+N K    H++ + +  H     L SD  +    E   D S LE+ E 
Sbjct: 361 NRNPLSVLDSPSENSKEKGNHRIQDKKIPH-----LKSDYFSASLSETEADSSELELSET 420

Query: 421 --EFADSCFSTSESEFESD-ILDDFEHGRIEGSFS--QTGEMSSTTMNTCSASQNKF 469
              F D   S +ES+ E D +LD   +   E  F+  Q   +SSTT ++  A ++ +
Sbjct: 421 EDSFPDENLSRNESDSEEDSMLDSNGNHEKEVYFTKLQYENVSSTTGSSSMAKRSHY 426

[Close]

BLAST of CmoCh14G005660 vs. TrEMBL
Match: A0A0S3SDE1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G212600 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 2.1e-113
Identity = 260/477 (54.51%), Postives = 308/477 (64.57%), Query Frame = 1


Query: 1   MAKSLFHNLRRAS--LLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNL 60
           MA SLF  +RRAS  L F  ++      R V       FS +++   L       G RNL
Sbjct: 1   MATSLFRTIRRASSALRFSYATSFSVSLRSVGRSNMCVFSPLRHRVSLGEQGYRWGLRNL 60

Query: 61  SYGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVK 120
           S+G VNLVI+ GK KFET EV+PPKKDKWKTKK+LKMQRKREK+KRKAAN          
Sbjct: 61  SHGRVNLVITGGKTKFETDEVEPPKKDKWKTKKRLKMQRKREKEKRKAAN---------- 120

Query: 121 GKKKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVT 180
                              K     G+          +KKK  F S           D  
Sbjct: 121 ------------------RKDPRRLGVKG--------KKKKQRFASA----------DER 180

Query: 181 VIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 240
           +   +  ARIKE LLIERLKRYEVP++QGPVV+P +LT EERFY+KKM QKRSNY+ IGR
Sbjct: 181 IKYKIENARIKETLLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQIGR 240

Query: 241 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 300
           RG+FGGV+LNMHMHWKKHETVKV CKPCKPGQVHEYAQE+ARLSGGIP+QIIGDDTIIFY
Sbjct: 241 RGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFY 300

Query: 301 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360
           RG+ Y QP+VMSPIDTLSKK+ALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Sbjct: 301 RGRNYEQPDVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360

Query: 361 DRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGE- 420
           +RNPLS+LD PS+N K    H++ + +  H     L SD  +    E   D S LE+ E 
Sbjct: 361 NRNPLSVLDSPSENSKEKGNHRIQDKKIPH-----LKSDYFSASLSETEADSSELELSET 420

Query: 421 --EFADSCFSTSESEFESD-ILDDFEHGRIEGSFS--QTGEMSSTTMNTCSASQNKF 469
              F D   S +ES+ E D +LD   +   E  F+  Q   +SSTT ++  A ++ +
Sbjct: 421 EDSFPDENLSRNESDSEEDSMLDSNGNHEKEVYFTKLQYENVSSTTGSSSMAKRSHY 426

[Close]

BLAST of CmoCh14G005660 vs. TAIR10
Match: AT2G28480.1 (AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 355.1 bits (910), Expect = 6.6e-98
Identity = 220/433 (50.81%), Postives = 266/433 (61.43%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MA +    LR+AS   RSS    P       +P S          +  ++P+    +  Y
Sbjct: 1   MAIAFARGLRKASSFLRSS---YPLLISSRLLPISQEFYDSTLTFVLPTRPICRNFSHGY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           G+VNLVIS+GKPKFET E+DPPKK KW TKK+LK                      +K K
Sbjct: 61  GTVNLVISEGKPKFETRELDPPKKYKWLTKKRLK----------------------LKRK 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
           K+++  NA  R   +                  + + KK  F++       +L+      
Sbjct: 121 KEREERNAANRKDPRR----------------LTVKGKKKKFVNAEERIKYKLE------ 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
               +A+IKEALLIERLKRYEV +VQGP V PH +T EERFY+KKMGQKRSNYVPIGRRG
Sbjct: 181 ----KAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMH+HWKKHETVKV C   KPGQV +YA+E+A+LSGG+P+ IIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           K YVQP+VMSPIDTLSKKRA EKSKYEQSLESVR FIAIAEKELELYYRHVALY DPN+R
Sbjct: 301 KGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALYDDPNNR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 420
           NPLSILD   D+   S +H  +E            SD  +    E  D+E  E+ +  + 
Sbjct: 361 NPLSILD---DSPSESRQHHENEF-------FLSCSDTDSSSEDEDEDEELCEL-DNGSS 371

Query: 421 SCFSTSESEFESD 434
           S  S  E   ES+
Sbjct: 421 SSSSAKEELSESE 371

[Close]

BLAST of CmoCh14G005660 vs. TAIR10
Match: AT4G13070.1 (AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-57
Identity = 107/185 (57.84%), Postives = 141/185 (76.22%), Query Frame = 1


Query: 176 DVTVIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVP 235
           +V +   L +A+ KE  LIE+L++Y+VP+      +P +LT EE+ Y+K+ G+KR N+V 
Sbjct: 143 EVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVL 202

Query: 236 IGRRGVFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQEIARLSGGIPIQIIGDDT 295
           +GRRGVFGGV+LN+H+HWKKHETVKV CKPC KPGQVHEYA+E+ARLS GI I +  ++T
Sbjct: 203 VGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNT 262

Query: 296 IIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALY 355
           I+ YRGK YV+PEVMSP+DTLSK +ALEK +YEQSLE    FI   EKELE Y+++VA +
Sbjct: 263 IVLYRGKNYVRPEVMSPVDTLSKDKALEKYRYEQSLEHTSEFIEKLEKELEEYHKYVARH 322

Query: 356 GDPND 360
               D
Sbjct: 323 KKKKD 327

[Close]

BLAST of CmoCh14G005660 vs. TAIR10
Match: AT3G25440.1 (AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 102/238 (42.86%), Postives = 140/238 (58.82%), Query Frame = 1


Query: 183 LLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVF 242
           L +AR KE  L+E +K+ E         +P  LT EE FY  KMG K  NYVP+GRRG++
Sbjct: 145 LRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIY 204

Query: 243 GGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKE 302
            GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK 
Sbjct: 205 QGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKN 264

Query: 303 YVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 362
           YVQP  E+MSP  TL +K+AL+KSK   +L +VR++I   E+EL+L     A      D 
Sbjct: 265 YVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRDY 324

Query: 363 NPLSILDLP--SDNLKNSLKHQVDEMEDSH---SAALCLASDVMNKRNPEFSDDESLE 414
             + + D    S+ LK  ++   + +ED      A L LA+D  +  +  F  D  LE
Sbjct: 325 TNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLELATD--SDLSDIFETDSELE 377

[Close]

BLAST of CmoCh14G005660 vs. TAIR10
Match: AT3G27550.1 (AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-36
Identity = 105/315 (33.33%), Postives = 170/315 (53.97%), Query Frame = 1


Query: 179 VIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 238
           +I  L +A+ K ALL+++LK+Y++P +  PV +P   T+E+    KK+G K  NYVP+G 
Sbjct: 56  LIYNLKRAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGV 115

Query: 239 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 298
           RGVFGGV+ NMHMHWK HETV+V C      ++ E A  IARLSGG+ I I    TII +
Sbjct: 116 RGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMF 175

Query: 299 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 358
           RG+ Y QP+ + P++TL+K++AL K+++EQ+LES +  I   E++L    R + +    N
Sbjct: 176 RGRNYRQPKNLIPVNTLTKRKALFKARFEQALESQKLNIKKTEQQL----RRMGV----N 235

Query: 359 DRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEF 418
             +P+++  +    + ++  + +D+ E           D  ++R     + E  E G+E 
Sbjct: 236 PEDPVAMASI--HRVASTFFNAIDKKE---GTPYVFHGDKQSERGTSVDNREESEPGDED 295

Query: 419 AD---------SCFSTSESEF-ESDILDDFEHGRIE-------GSFSQTGEMSSTTMNTC 477
           +D              ++ E+ E +  +  E GRI           S+T E+ S    + 
Sbjct: 296 SDQEELDRFIAEIEEAADKEWEEEEAAEQEESGRIRYWNREEFAGRSRTPELRSYGDASH 355

[Close]

BLAST of CmoCh14G005660 vs. TAIR10
Match: AT3G01370.1 (AT3G01370.1 CRM family member 2)

HSP 1 Score: 99.8 bits (247), Expect = 5.0e-21
Identity = 89/371 (23.99%), Postives = 167/371 (45.01%), Query Frame = 1


Query: 124 KFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVIL 183
           K +  EE IK +  K  +     +    + + Q K     S      A L++    + + 
Sbjct: 494 KLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNS----PEAILEKTSMKLSMA 553

Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ +     ++  L+  E P++    ++   +T +E++ ++K+G K   ++ +GRRGVF 
Sbjct: 554 LEKKANAEKVLADLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFD 613

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRG 303
           G I NMH+HWK  E VK+ C        H+ A+ +   SGGI +    +     II YRG
Sbjct: 614 GTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRG 673

Query: 304 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND- 363
           K Y +P+ + P   LSK+ AL++S   Q  +S++  +      +E   R +      N+ 
Sbjct: 674 KNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNET 733

Query: 364 ----RNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIG 423
                +   +++  ++N     +   +++E  +S+ L + S          S +E+ E  
Sbjct: 734 WSDGESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPS----------SGEENWEDD 793

Query: 424 EEFADSCFSTSESEFESDILDDFEHGRIEGS----------FSQTGEMSSTTMNTCSASQ 477
            E      +TS  E++ D  +     R EG+          F++TG  ++++ +  S   
Sbjct: 794 SEGEVDPLTTSSQEYQEDESESASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPH 848

[Close]

BLAST of CmoCh14G005660 vs. NCBI nr
Match: gi|659085302|ref|XP_008443348.1| (PREDICTED: uncharacterized protein LOC103486957 [Cucumis melo])

HSP 1 Score: 663.7 bits (1711), Expect = 2.5e-187
Identity = 358/478 (74.90%), Postives = 390/478 (81.59%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQ  FRP+L +PD+ FS+IKNFP  NISKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV++QGKPKFETH VDPPKK+KWKTKKKLKMQR R KQKRK               
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRK--------------- 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
              K    + R+K K                     KK+ +       +AAE  ++    
Sbjct: 121 AANKRDPRQLRVKGK---------------------KKQKF------PNAAERIKNK--- 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
             L +ARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFY+KKMGQKRSNYVPIGRRG
Sbjct: 181 --LERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMGQKRSNYVPIGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           KEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDR
Sbjct: 301 KEYVQPEVMSPIGTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 420
           NPLSIL++PSDNLKNS KHQ+  MEDSHSAALCL SDVMN+RNP+FSDDESL+IG+EF D
Sbjct: 361 NPLSILNVPSDNLKNSDKHQITNMEDSHSAALCLESDVMNQRNPDFSDDESLDIGDEFGD 420

Query: 421 SCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           +CFSTSES+FESD LD+ + GRIE S SQT EM STTMNTCSA QNK EFH QELPIH
Sbjct: 421 ACFSTSESDFESDKLDESDDGRIEVSVSQTEEMFSTTMNTCSAFQNKCEFHKQELPIH 431

[Close]

BLAST of CmoCh14G005660 vs. NCBI nr
Match: gi|449437795|ref|XP_004136676.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus])

HSP 1 Score: 647.1 bits (1668), Expect = 2.4e-182
Identity = 352/478 (73.64%), Postives = 388/478 (81.17%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MAKSLFHNLRRA LLFRSSSLNQ  FRP+L +PD+ FS+IK FP  NISKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRAPLLFRSSSLNQLSFRPILEIPDTVFSQIKKFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR R KQKRK               
Sbjct: 61  GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMRLKQKRK--------------- 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
              K    + R+K K                     KK+ +       +AAE  ++    
Sbjct: 121 AANKRDPRQLRVKGK---------------------KKQKF------PNAAERIKNK--- 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
             L  ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMGQKRSNYVPIGRRG
Sbjct: 181 --LENARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           K+YVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDR
Sbjct: 301 KDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 420
           NPLSIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FSDDESL+IG+ FAD
Sbjct: 361 NPLSILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFSDDESLDIGDGFAD 420

Query: 421 SCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           +CFSTSES+FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK EFH QELPIH
Sbjct: 421 ACFSTSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNKCEFHKQELPIH 430

[Close]

BLAST of CmoCh14G005660 vs. NCBI nr
Match: gi|700204381|gb|KGN59514.1| (hypothetical protein Csa_3G823620 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 1.6e-141
Identity = 255/295 (86.44%), Postives = 278/295 (94.24%), Query Frame = 1


Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMGQKRSNYVPIGRRGVFG
Sbjct: 115 LRARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRGVFG 174

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEY 303
           GVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+Y
Sbjct: 175 GVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY 234

Query: 304 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPL 363
           VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDRNPL
Sbjct: 235 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDRNPL 294

Query: 364 SILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCF 423
           SIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FSDDESL+IG+ FAD+CF
Sbjct: 295 SILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFSDDESLDIGDGFADACF 354

Query: 424 STSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           STSES+FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK EFH QELPIH
Sbjct: 355 STSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNKCEFHKQELPIH 408

[Close]

BLAST of CmoCh14G005660 vs. NCBI nr
Match: gi|802554972|ref|XP_012065185.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas])

HSP 1 Score: 439.9 bits (1130), Expect = 5.8e-120
Identity = 251/430 (58.37%), Postives = 299/430 (69.53%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPF-FRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLS 60
           MA +LF  LRRASLL + SS   PF FRP+    +S FS+ +    LN+  P L  RNLS
Sbjct: 1   MAGALFRCLRRASLLVKPSSSLNPFTFRPIFDYAESVFSQSRVISQLNLPNPSLVLRNLS 60

Query: 61  YGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKG 120
           +G+VNLVIS+GKPKFE HEVDPPKK+KW+TKK+LKMQRKREKQKR               
Sbjct: 61  HGNVNLVISEGKPKFEIHEVDPPKKEKWQTKKRLKMQRKREKQKR--------------- 120

Query: 121 KKKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTV 180
                  +A +R   +L                   +KKK  F +       +L+R    
Sbjct: 121 ------KDANKRDPRRLTVK----------------RKKKQKFANAEERIKFKLER---- 180

Query: 181 IVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRR 240
                 A+IKEA LIERLKRYEVP+VQGP V+PH+LT EERF++KKMGQK+SNYVPIGRR
Sbjct: 181 ------AKIKEAALIERLKRYEVPKVQGPEVKPHDLTGEERFFVKKMGQKKSNYVPIGRR 240

Query: 241 GVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYR 300
           GVFGGVILNMHMHWKKHETVKV CK CKPGQ+HEYAQEIARLSGGIPI  IGDDT+IFYR
Sbjct: 241 GVFGGVILNMHMHWKKHETVKVICKHCKPGQLHEYAQEIARLSGGIPIHFIGDDTVIFYR 300

Query: 301 GKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND 360
           GK YVQP+VMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPN+
Sbjct: 301 GKNYVQPKVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNN 360

Query: 361 RNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFA 420
           RNPLSIL+  S++ K S K +      + + +    S  +++   + +D +  EI ++F 
Sbjct: 361 RNPLSILNTSSNDFKESGKPK----NKNSNLSFYGTSPGVSETEVDSTDGDLSEIEDDFE 379

Query: 421 DSCFSTSESE 430
           D   S SES+
Sbjct: 421 DEDLSASESD 379

[Close]

BLAST of CmoCh14G005660 vs. NCBI nr
Match: gi|567901040|ref|XP_006443008.1| (hypothetical protein CICLE_v10020228mg [Citrus clementina])

HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116
Identity = 250/469 (53.30%), Postives = 307/469 (65.46%), Query Frame = 1


Query: 5   LFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSYGSVN 64
           LFHNLR+AS L +  SL     R +L  P S      +        P   +RN+S+G+VN
Sbjct: 6   LFHNLRKASALNKFLSL-----RSILRAPQSVLCPYSHLGPPKPINPSWVWRNVSHGTVN 65

Query: 65  LVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQK 124
           LVIS+GKPKFETHEV PPKK+KW+TKK+ K+++KREKQK                     
Sbjct: 66  LVISEGKPKFETHEVHPPKKEKWQTKKRFKLKKKREKQK--------------------- 125

Query: 125 FSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVILL 184
             +A +R   +L                   +KKK  F +       +L+          
Sbjct: 126 RKDANKRDPRRLTVKG---------------KKKKQKFANAEDRIKYKLE---------- 185

Query: 185 QARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGG 244
           +A+IKEALLIERLKRYEVP+VQGPVV+PH LT EERFY KKM QKRSNYVPIGRRGVFGG
Sbjct: 186 KAKIKEALLIERLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRRGVFGG 245

Query: 245 VILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYV 304
           VILNMHMHWKKHETVKVFCKP KPGQ+HE+A+EIARLSGGIPIQIIGDDT+IFYRGK YV
Sbjct: 246 VILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDTVIFYRGKNYV 305

Query: 305 QPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLS 364
           QPE+MSPIDTLSKK+ALEKSKYEQSLESVRRFIA+AEKELELYYRH+ALYGDPN+RNP+S
Sbjct: 306 QPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIALYGDPNNRNPMS 365

Query: 365 ILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCFS 424
           I+D PS   + S K ++ E +   S    L+       +   S D++L   +   D   S
Sbjct: 366 IMDNPSKVTQESWKFKMVERKSLDSTYDALSPGASEAESD--STDQTLSELDYIEDEGLS 421

Query: 425 TSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQ 474
           TSES+ + D   DF+    + S S+  E+S T   + S S+  ++ +NQ
Sbjct: 426 TSESDSQDDSSSDFDSKESQVSSSRMRELSFTMSGSSSMSKTLYDSNNQ 421

The following BLAST results are available for this feature:

BLAST of CmoCh14G005660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3544_ARATH	2.5e-38	42.86	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
CFM2_ARATH	8.9e-20	23.99	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2...	[more]
CFM3B_ARATH	1.4e-17	29.91	CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana GN=CFM...	[more]
CFM3A_ARATH	4.1e-17	29.13	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
CFM3_ORYSJ	1.6e-16	26.30	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]

BLAST of CmoCh14G005660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF61_CUCSA	1.1e-141	86.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823620 PE=4 SV=1	[more]
V4T7K8_9ROSI	1.2e-116	53.30	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020228mg PE=4 SV=1	[more]
A0A059DBD5_EUCGR	5.6e-114	52.30	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00093 PE=4 SV=1	[more]
A0A0L9V745_PHAAN	2.1e-113	54.51	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g164000 PE=4 SV=1	[more]
A0A0S3SDE1_PHAAN	2.1e-113	54.51	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G212600 PE=...	[more]

BLAST of CmoCh14G005660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28480.1	6.6e-98	50.81	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	1.9e-57	57.84	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	1.4e-39	42.86	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	1.9e-36	33.33	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G01370.1	5.0e-21	23.99	CRM family member 2	[more]

BLAST of CmoCh14G005660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085302\|ref\|XP_008443348.1\|	2.5e-187	74.90	PREDICTED: uncharacterized protein LOC103486957 [Cucumis melo]	[more]
gi\|449437795\|ref\|XP_004136676.1\|	2.4e-182	73.64	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|700204381\|gb\|KGN59514.1\|	1.6e-141	86.44	hypothetical protein Csa_3G823620 [Cucumis sativus]	[more]
gi\|802554972\|ref\|XP_012065185.1\|	5.8e-120	58.37	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|567901040\|ref\|XP_006443008.1\|	1.7e-116	53.30	hypothetical protein CICLE_v10020228mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001890	RNA-binding_CRM

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G005660.1	CmoCh14G005660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	GENE3D	G3DSA:3.30.110.60		coord: 214..309 score: 2.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 215..299 score: 3.8
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 215..299 score: 4.3
IPR001890	RNA-binding, CRM domain	PROFILE	PS51295	CRM	coord: 213..310 score: 18
IPR001890	RNA-binding, CRM domain	unknown	SSF75471	YhbY-like	coord: 214..309 score: 7.59
None	No IPR available	unknown	Coil	Coil	coord: 90..110 scor
None	No IPR available	PANTHER	PTHR31426	FAMILY NOT NAMED	coord: 4..138 score: 1.8E-215coord: 186..439 score: 1.8E
None	No IPR available	PANTHER	PTHR31426:SF2	SUBFAMILY NOT NAMED	coord: 4..138 score: 1.8E-215coord: 186..439 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G005660	Cucsa.338370	Cucumber (Gy14) v1	cgycmoB0926
CmoCh14G005660	CmaCh14G005610	Cucurbita maxima (Rimu)	cmacmoB244
CmoCh14G005660	Cla016959	Watermelon (97103) v1	cmowmB214
CmoCh14G005660	Csa3G823620	Cucumber (Chinese Long) v2	cmocuB226
CmoCh14G005660	MELO3C009824	Melon (DHL92) v3.5.1	cmomeB215
CmoCh14G005660	ClCG10G015540	Watermelon (Charleston Gray)	cmowcgB207
CmoCh14G005660	CSPI03G38490	Wild cucumber (PI 183967)	cmocpiB229
CmoCh14G005660	Lsi03G015330	Bottle gourd (USVL1VR-Ls)	cmolsiB230
CmoCh14G005660	Cp4.1LG03g08310	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G005660	MELO3C009824.2	Melon (DHL92) v3.6.1	cmomedB244
CmoCh14G005660	CsaV3_3G040890	Cucumber (Chinese Long) v3	cmocucB0270
CmoCh14G005660	Cla97C10G198430	Watermelon (97103) v2	cmowmbB230
CmoCh14G005660	Bhi11G002426	Wax gourd	cmowgoB0292
CmoCh14G005660	CsGy3G036020	Cucumber (Gy14) v2	cgybcmoB279
CmoCh14G005660	Carg09812	Silver-seed gourd	carcmoB0592

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G005660	Wax gourd	cmowgoB0281
CmoCh14G005660	Cucurbita moschata (Rifu)	cmocmoB227