CmoCh14G005660.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G005660.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CRS1/YhbY (CRM) domain protein
Location	Cmo_Chr14 : 2880620 .. 2884475 (-)
Sequence length	1929

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATAAACGTTAGCGCCACCTCGCCCTGCTCCATCTCTACCTAGAGTCGACTTGTTATCGGTTCGAGCCGACTCCTATTGGCTTGGGTTCAGCTCTCGCACCAATTCTCACCACCGTGGCTCACCATCGATCTCTCTCTCTCTCTCTCTCTGCGCAGGGTTTAGTCTCATTCACACTACCGTCGATTCTCTCTCCCAGCGTTGCCGTCGGTTGCTTTGACACGCGGCTGGTCTCTCGGATTCCCGCTTCCTCTAGGGACAGCACCGATATCCTCAGGTACAAGTTTTTCTGGGTTTTAAATTTCTTTTTAAGTTCGAGGAACTTGGAATTGTGATTTTCTTTGATTAGTGAGTGTGCAAACGGATGATTTGGATTTTTTGTGGTTTTTTCCCCTTAGATGTTAAGATAATGAGATGAAATTTCTGGTATTACCTTTTGTCTGAGCTTTCTATATCGTTTCATTGTTAAATATTGCAAGTGATTATTAAAACTGTGGGAACAAAACTTGATTAATCGTCTTCAAATTTATAGTGAGAAATGCCTAGGGGGATTTCTTTCTCATGTAATTTTCTTCTGTTCTAGTTAAAATGAAATAGGAGAAAGCAGAAATTTATCGAACCCAATCACTTAACTGGACTACGAGTGTGTAATTGTTTTTGGTTCGGCTCAGGTTTCATTTGAAAATGTCAGTGTGGCTCAATCTAGTTTAGTATGTAAGGGTTTGGTGAATCGGTCTGATATCCAAGTTCTTTGTTGCCCATTGGTATGATTTGTAACTGATTGGGAACTATTGCATTGGAGCTGCTAATGTATGAAGTTATTTGATTAATTATGAAATAAATTTATTTCCATTGTTTAAAAGTCTTTGAATTGAAAGTTGTACATGATGAAATAAGAACTTTTTAAGGATTTTGATCAAACTTGTTTTGAATTATCGAGTTGCAGATACTTTCCACGAGTATGCTTTGTTCTTCGTTAAATTTATCTTTATTGTTTCCTTTTTCTTTTGCAGCATATTCAAATGAAATTATGGTCGCGTGACAACTAACTATGCTACAAGAAATATAGTTATATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGGTACTTTTCAGTCAAGGTTCCTCCATCTTCTTAATATTATCGATGTGTTGTACTTTTGAACAGCAGTTTTCATCTTCTTTTCCTTAGATTTTCCACTCTAGTGATAAATTTCTTTGTTGATCCATTGCTTTCAAAAAAATTTAACCTAGCCAACCGGGTTTGAGATTGGAAGAAAATGGCTTGTATTTGACTTTGAAAGACAGAAATAGTGTAGAATATATAACTTTTGATGAATTTTCTGGTTGAATTTTACTGTGTTTACATCATATATTCTGTTGCAGACCTGTTCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAAACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCAAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGATAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGGTAAGTAAAAAAAGAATGGTTTCAGAATGTTATATGGGTCTATATTGTTAAAGTCCAGCTTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTTATGAGCATTTCTCTTCATTCTGCTGCTGAACTGCAGCGAGATGGTTTTCAAATTAATGGATGTTGGAAATTTTTCATATGATTTCAGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCATTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTTAGTTTTTAAAATTTTCAGTTTTCATTAATGTATATGATGTCTTTTTCTTTTCTTTCTCTTTTTTATAATCGGAGTTCGTGGGCCAGTGCATCTTTATTTAAGACATAATAGTACGGGAGGATATCAGTAGGACTATTTGGCTTTTCGACCATAAAATATGTGCGTGGGAGTCGGCTGTGTAGTTAAGTAATGGTATTGAAGTTAGAGAAGTGTGAGTTTCTCCTAAGCATATACTTTTCGTTTTTGGATTGATGGAGTGTCAAATACATGGGAGGGAGAATTCAATCCTCTCCGGAGAGTGTAACGGCCCAAGCCCACTGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTTGGGCTTTTCCTCAAGGTTCTTAAGGCACGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGAAGCTTTCGTTCTCCTCTCCAACTGATGTGGGTCTCACAGGGAGTTTGTCAAGTTTTGACTCTTGTTGTGTGATTCCTATCAAGCTGTCAGTGTCGGTACCTAGAAAATAGTGCAGCTTTTCCATTTTCATGTTTAGATTAGCTTGATCAGAGAATAACGTGCTGACATTAGATTGTTGTACGAAAAGCTTTCATTTAACAGCAAATACCAAATGTTGCAAACTTGGTCTGTCTAATTAGATTTAATAGTTGTGTTATGGTATTGTTGGCCTTTTGTTATCCAATCTGTTTGCTGCATGTATGCTTAAAACCTCAATGTTCATGTTTATGTGGATTCTGTTTGTAGGAAATTGATTATTAATAAAACATACCAATGGCTTCCCTCCTTGCAGGCACTAGAAAAGTCCAAGTACGAGCAGTCCCTCGAGTCTGTTCGCCGATTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAACTCACTGAAACATCAAGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCATTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAATCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGAGACTGCAACCTGATTTTTTGTTCGACTTCAATGGATCTATGATCCAATGAAAACATGAGTTCATAGATGTATACCCAAACATTTTCAGAAATTATAGTAACTAACCGTTTCTAAGATGATATGAGCATGGGAAAATTTGAC

mRNA sequence

ATGAAATAAACGTTAGCGCCACCTCGCCCTGCTCCATCTCTACCTAGAGTCGACTTGTTATCGGTTCGAGCCGACTCCTATTGGCTTGGGTTCAGCTCTCGCACCAATTCTCACCACCGTGGCTCACCATCGATCTCTCTCTCTCTCTCTCTCTGCGCAGGGTTTAGTCTCATTCACACTACCGTCGATTCTCTCTCCCAGCGTTGCCGTCGGTTGCTTTGACACGCGGCTGGTCTCTCGGATTCCCGCTTCCTCTAGGGACAGCACCGATATCCTCAGCATATTCAAATGAAATTATGGTCGCGTGACAACTAACTATGCTACAAGAAATATAGTTATATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGACCTGTTCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAAACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCAAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGATAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGTCCAGCTTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTTATGAGCATTTCTCTTCATTCTGCTGCTGAACTGCAGCGAGATGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCATTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCACTAGAAAAGTCCAAGTACGAGCAGTCCCTCGAGTCTGTTCGCCGATTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAACTCACTGAAACATCAAGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCATTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAATCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGAGACTGCAACCTGATTTTTTGTTCGACTTCAATGGATCTATGATCCAATGAAAACATGAGTTCATAGATGTATACCCAAACATTTTCAGAAATTATAGTAACTAACCGTTTCTAAGATGATATGAGCATGGGAAAATTTGAC

Coding sequence (CDS)

ATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGACCTGTTCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAAACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCAAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGATAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGTCCAGCTTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTTATGAGCATTTCTCTTCATTCTGCTGCTGAACTGCAGCGAGATGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCATTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCACTAGAAAAGTCCAAGTACGAGCAGTCCCTCGAGTCTGTTCGCCGATTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAACTCACTGAAACATCAAGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCATTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAATCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGA

Homology

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BLAST of CmoCh14G005660.1 vs. Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.5e-38
Identity = 102/238 (42.86%), Postives = 140/238 (58.82%), Query Frame = 1


Query: 183 LLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVF 242
           L +AR KE  L+E +K+ E         +P  LT EE FY  KMG K  NYVP+GRRG++
Sbjct: 145 LRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIY 204

Query: 243 GGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKE 302
            GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK 
Sbjct: 205 QGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKN 264

Query: 303 YVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 362
           YVQP  E+MSP  TL +K+AL+KSK   +L +VR++I   E+EL+L     A      D 
Sbjct: 265 YVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRDY 324

Query: 363 NPLSILDLP--SDNLKNSLKHQVDEMEDSH---SAALCLASDVMNKRNPEFSDDESLE 414
             + + D    S+ LK  ++   + +ED      A L LA+D  +  +  F  D  LE
Sbjct: 325 TNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLELATD--SDLSDIFETDSELE 377

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BLAST of CmoCh14G005660.1 vs. Swiss-Prot
Match: CFM2_ARATH (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.9e-20
Identity = 89/371 (23.99%), Postives = 167/371 (45.01%), Query Frame = 1


Query: 124 KFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVIL 183
           K +  EE IK +  K  +     +    + + Q K     S      A L++    + + 
Sbjct: 494 KLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNS----PEAILEKTSMKLSMA 553

Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ +     ++  L+  E P++    ++   +T +E++ ++K+G K   ++ +GRRGVF 
Sbjct: 554 LEKKANAEKVLADLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFD 613

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRG 303
           G I NMH+HWK  E VK+ C        H+ A+ +   SGGI +    +     II YRG
Sbjct: 614 GTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRG 673

Query: 304 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND- 363
           K Y +P+ + P   LSK+ AL++S   Q  +S++  +      +E   R +      N+ 
Sbjct: 674 KNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNET 733

Query: 364 ----RNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIG 423
                +   +++  ++N     +   +++E  +S+ L + S          S +E+ E  
Sbjct: 734 WSDGESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPS----------SGEENWEDD 793

Query: 424 EEFADSCFSTSESEFESDILDDFEHGRIEGS----------FSQTGEMSSTTMNTCSASQ 477
            E      +TS  E++ D  +     R EG+          F++TG  ++++ +  S   
Sbjct: 794 SEGEVDPLTTSSQEYQEDESESASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPH 848

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BLAST of CmoCh14G005660.1 vs. Swiss-Prot
Match: CFM3B_ARATH (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana GN=CFM3B PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 70/234 (29.91%), Postives = 113/234 (48.29%), Query Frame = 1


Query: 215 LTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEY 274
           +T EERF  +K+G K   ++ +GRRGVF G + NMH+HWK  E +K+  K        + 
Sbjct: 665 ITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKV 724

Query: 275 AQEIARLSGGIPI---QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLE 334
           A  +   SGGI +   +I     +I YRGK+Y +P  + P + L+K++AL +S   Q  E
Sbjct: 725 AMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKRE 784

Query: 335 SVRRFIAIAE---KELELYYRHVALYGDPNDRNPLSILDLPSDNLKNS-----------L 394
           ++ + I   +   ++L      V L  D  D      LD+   + + +           L
Sbjct: 785 ALIKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLDMAYSSDEETEETDGEEDDVYL 844

Query: 395 KHQVDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGEEFADSCFSTSESEF 431
               DE ED     +  A+  +++ + EF  DES  + G+  A S  +T E+ F
Sbjct: 845 DTYEDEGEDDEEGGI-QANGSLSETDVEFGSDESDTDFGDNSASS--TTPETTF 895

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BLAST of CmoCh14G005660.1 vs. Swiss-Prot
Match: CFM3A_ARATH (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CFM3A PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.1e-17
Identity = 67/230 (29.13%), Postives = 111/230 (48.26%), Query Frame = 1


Query: 211 EPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQ 270
           +P ++T EERF  +K+G K   ++ +GRRGVF G + NMH+HWK  E VK+  K      
Sbjct: 634 DPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 693

Query: 271 VHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYE 330
           V + A  +   SGGI +   ++     II YRG++Y +P ++ P + L+K++AL +S   
Sbjct: 694 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIEL 753

Query: 331 QSLESVRRFIAIAE---KELELYYRHVALYGDPNDRNPLSILDLPSDNLKNSLKHQVDEM 390
           Q  E + + I+  +   K+L      +    D  D    + LD+       S   + DE 
Sbjct: 754 QRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDM----AYASSDEETDEE 813

Query: 391 EDSHSAALCLASDVMNKRNPE-FSDDESLEIGEEFADSCFSTSESEFESD 434
           +D  +              PE +++ E  E GE  A     T + + +S+
Sbjct: 814 DDDDAF-------------PETYAEGEDGEEGEILAGELSETEDKDLDSN 846

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BLAST of CmoCh14G005660.1 vs. Swiss-Prot
Match: CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CFM3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-16
Identity = 81/308 (26.30%), Postives = 143/308 (46.43%), Query Frame = 1


Query: 171 AELQRDVTVIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKR 230
           A+L R +   + L Q +I++A  +       +   +G +  P  +T EERF  +K+G + 
Sbjct: 549 ADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEG-IQPPETITDEERFMFRKLGLRM 608

Query: 231 SNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI--- 290
             ++ +GRRGVF G I NMH+HWK  E VK+  K    G V + A  +   SGGI +   
Sbjct: 609 KAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVD 668

Query: 291 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 350
           ++     I+ +RGK+Y +P  + P + LSK++AL +S   Q  E++   IA   + ++  
Sbjct: 669 KVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKL 728

Query: 351 YRHVALYGDPNDRNPLSILDLPSDNLKNSLKHQVDEMED-------SHSAALCLASDVMN 410
              +       +   +  L    D+  +S +  V++ +D        +S A+    D  +
Sbjct: 729 KAELLQMEGVKEEGDVE-LYAKLDSAYSSDEEDVEDEDDEAYLRSFDNSVAVQNGDDRTS 788

Query: 411 KRNPEFSDDESLEIGEEFADSCFSTSES---EFESDILDDFEHGRIEGS-FSQTGEMSST 465
               + + D+  +  +E  D      E    ++E+D  DD      +G  ++ T   SS 
Sbjct: 789 LDGSDANSDDEGDYSDEDDDEDDDNDEEDGFDYENDDEDDVPPTTSDGDLYNHTDFGSSD 848

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BLAST of CmoCh14G005660.1 vs. TrEMBL
Match: A0A0A0LF61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823620 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 1.1e-141
Identity = 255/295 (86.44%), Postives = 278/295 (94.24%), Query Frame = 1


Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMGQKRSNYVPIGRRGVFG
Sbjct: 115 LRARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRGVFG 174

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEY 303
           GVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+Y
Sbjct: 175 GVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY 234

Query: 304 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPL 363
           VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDRNPL
Sbjct: 235 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDRNPL 294

Query: 364 SILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCF 423
           SIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FSDDESL+IG+ FAD+CF
Sbjct: 295 SILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFSDDESLDIGDGFADACF 354

Query: 424 STSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           STSES+FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK EFH QELPIH
Sbjct: 355 STSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNKCEFHKQELPIH 408

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BLAST of CmoCh14G005660.1 vs. TrEMBL
Match: V4T7K8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020228mg PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.2e-116
Identity = 250/469 (53.30%), Postives = 307/469 (65.46%), Query Frame = 1


Query: 5   LFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSYGSVN 64
           LFHNLR+AS L +  SL     R +L  P S      +        P   +RN+S+G+VN
Sbjct: 6   LFHNLRKASALNKFLSL-----RSILRAPQSVLCPYSHLGPPKPINPSWVWRNVSHGTVN 65

Query: 65  LVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQK 124
           LVIS+GKPKFETHEV PPKK+KW+TKK+ K+++KREKQK                     
Sbjct: 66  LVISEGKPKFETHEVHPPKKEKWQTKKRFKLKKKREKQK--------------------- 125

Query: 125 FSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVILL 184
             +A +R   +L                   +KKK  F +       +L+          
Sbjct: 126 RKDANKRDPRRLTVKG---------------KKKKQKFANAEDRIKYKLE---------- 185

Query: 185 QARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGG 244
           +A+IKEALLIERLKRYEVP+VQGPVV+PH LT EERFY KKM QKRSNYVPIGRRGVFGG
Sbjct: 186 KAKIKEALLIERLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRRGVFGG 245

Query: 245 VILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYV 304
           VILNMHMHWKKHETVKVFCKP KPGQ+HE+A+EIARLSGGIPIQIIGDDT+IFYRGK YV
Sbjct: 246 VILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDTVIFYRGKNYV 305

Query: 305 QPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLS 364
           QPE+MSPIDTLSKK+ALEKSKYEQSLESVRRFIA+AEKELELYYRH+ALYGDPN+RNP+S
Sbjct: 306 QPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIALYGDPNNRNPMS 365

Query: 365 ILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCFS 424
           I+D PS   + S K ++ E +   S    L+       +   S D++L   +   D   S
Sbjct: 366 IMDNPSKVTQESWKFKMVERKSLDSTYDALSPGASEAESD--STDQTLSELDYIEDEGLS 421

Query: 425 TSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQ 474
           TSES+ + D   DF+    + S S+  E+S T   + S S+  ++ +NQ
Sbjct: 426 TSESDSQDDSSSDFDSKESQVSSSRMRELSFTMSGSSSMSKTLYDSNNQ 421

[Close]

BLAST of CmoCh14G005660.1 vs. TrEMBL
Match: A0A059DBD5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00093 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 5.6e-114
Identity = 250/478 (52.30%), Postives = 304/478 (63.60%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MA +   NL RAS L R SS +   FRP+L     + S  K+  L N +     FRNLS+
Sbjct: 1   MASTWLRNLLRASSLLRPSSASASSFRPILLSGRPSLSSSKHLLLGNPANTSWSFRNLSF 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVN V+S+GKPKFETHEVDPPKK+KWK KK+ K+Q+KR                     
Sbjct: 61  GSVNFVLSEGKPKFETHEVDPPKKEKWKNKKRFKLQKKR--------------------- 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
           +KQK   A ++   ++ K                  K+K  F +       +L+      
Sbjct: 121 EKQKRKAANKKDPRRVGK------------------KRKQKFANAEEKIKYKLE------ 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
               +ARIKE LLIE+LK+YEVP+VQGPVV+P NLT EERF++KKMGQK+SNY P+GRRG
Sbjct: 181 ----KARIKETLLIEKLKKYEVPKVQGPVVKPDNLTGEERFFLKKMGQKKSNYAPVGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMHMHWKKHETVKV CKPCKPGQVH+YAQEIARLSGGIPIQIIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQEIARLSGGIPIQIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           + YVQPE+MSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH ALYGDPN R
Sbjct: 301 RNYVQPEIMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHTALYGDPNSR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNK----RNPEFSDDESLEIGE 420
           NP++IL+ P      S      E+E       C   D +++       +FSD    E  E
Sbjct: 361 NPIAILEGPVQGTMGS-----KEVESLEKERQCATDDSLSRDYSPLESDFSDLSETE-SE 420

Query: 421 EFADSCFSTSESEFESDILDDFEHGRIEGSFSQT-GEMSSTTMNTCSASQNKFEFHNQ 474
           + ++   S  ES+ E     D  + R+ G+FS   G  S   + + SA  +KF  H++
Sbjct: 421 DGSEDDMSIGESDAEYGHTHDISNERV-GNFSGVGGHPSHDLVRSSSADSSKFGNHDK 422

[Close]

BLAST of CmoCh14G005660.1 vs. TrEMBL
Match: A0A0L9V745_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g164000 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 2.1e-113
Identity = 260/477 (54.51%), Postives = 308/477 (64.57%), Query Frame = 1


Query: 1   MAKSLFHNLRRAS--LLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNL 60
           MA SLF  +RRAS  L F  ++      R V       FS +++   L       G RNL
Sbjct: 1   MATSLFRTIRRASSALRFSYATSFSVSLRSVGRSNMCVFSPLRHRVSLGEQGYRWGLRNL 60

Query: 61  SYGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVK 120
           S+G VNLVI+ GK KFET EV+PPKKDKWKTKK+LKMQRKREK+KRKAAN          
Sbjct: 61  SHGRVNLVITGGKTKFETDEVEPPKKDKWKTKKRLKMQRKREKEKRKAAN---------- 120

Query: 121 GKKKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVT 180
                              K     G+          +KKK  F S           D  
Sbjct: 121 ------------------RKDPRRLGVKG--------KKKKQRFASA----------DER 180

Query: 181 VIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 240
           +   +  ARIKE LLIERLKRYEVP++QGPVV+P +LT EERFY+KKM QKRSNY+ IGR
Sbjct: 181 IKYKIENARIKETLLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQIGR 240

Query: 241 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 300
           RG+FGGV+LNMHMHWKKHETVKV CKPCKPGQVHEYAQE+ARLSGGIP+QIIGDDTIIFY
Sbjct: 241 RGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFY 300

Query: 301 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360
           RG+ Y QP+VMSPIDTLSKK+ALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Sbjct: 301 RGRNYEQPDVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360

Query: 361 DRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGE- 420
           +RNPLS+LD PS+N K    H++ + +  H     L SD  +    E   D S LE+ E 
Sbjct: 361 NRNPLSVLDSPSENSKEKGNHRIQDKKIPH-----LKSDYFSASLSETEADSSELELSET 420

Query: 421 --EFADSCFSTSESEFESD-ILDDFEHGRIEGSFS--QTGEMSSTTMNTCSASQNKF 469
              F D   S +ES+ E D +LD   +   E  F+  Q   +SSTT ++  A ++ +
Sbjct: 421 EDSFPDENLSRNESDSEEDSMLDSNGNHEKEVYFTKLQYENVSSTTGSSSMAKRSHY 426

[Close]

BLAST of CmoCh14G005660.1 vs. TrEMBL
Match: A0A0S3SDE1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G212600 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 2.1e-113
Identity = 260/477 (54.51%), Postives = 308/477 (64.57%), Query Frame = 1


Query: 1   MAKSLFHNLRRAS--LLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNL 60
           MA SLF  +RRAS  L F  ++      R V       FS +++   L       G RNL
Sbjct: 1   MATSLFRTIRRASSALRFSYATSFSVSLRSVGRSNMCVFSPLRHRVSLGEQGYRWGLRNL 60

Query: 61  SYGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVK 120
           S+G VNLVI+ GK KFET EV+PPKKDKWKTKK+LKMQRKREK+KRKAAN          
Sbjct: 61  SHGRVNLVITGGKTKFETDEVEPPKKDKWKTKKRLKMQRKREKEKRKAAN---------- 120

Query: 121 GKKKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVT 180
                              K     G+          +KKK  F S           D  
Sbjct: 121 ------------------RKDPRRLGVKG--------KKKKQRFASA----------DER 180

Query: 181 VIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 240
           +   +  ARIKE LLIERLKRYEVP++QGPVV+P +LT EERFY+KKM QKRSNY+ IGR
Sbjct: 181 IKYKIENARIKETLLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQIGR 240

Query: 241 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 300
           RG+FGGV+LNMHMHWKKHETVKV CKPCKPGQVHEYAQE+ARLSGGIP+QIIGDDTIIFY
Sbjct: 241 RGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFY 300

Query: 301 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360
           RG+ Y QP+VMSPIDTLSKK+ALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Sbjct: 301 RGRNYEQPDVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 360

Query: 361 DRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGE- 420
           +RNPLS+LD PS+N K    H++ + +  H     L SD  +    E   D S LE+ E 
Sbjct: 361 NRNPLSVLDSPSENSKEKGNHRIQDKKIPH-----LKSDYFSASLSETEADSSELELSET 420

Query: 421 --EFADSCFSTSESEFESD-ILDDFEHGRIEGSFS--QTGEMSSTTMNTCSASQNKF 469
              F D   S +ES+ E D +LD   +   E  F+  Q   +SSTT ++  A ++ +
Sbjct: 421 EDSFPDENLSRNESDSEEDSMLDSNGNHEKEVYFTKLQYENVSSTTGSSSMAKRSHY 426

[Close]

BLAST of CmoCh14G005660.1 vs. TAIR10
Match: AT2G28480.1 (AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 355.1 bits (910), Expect = 6.6e-98
Identity = 220/433 (50.81%), Postives = 266/433 (61.43%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MA +    LR+AS   RSS    P       +P S          +  ++P+    +  Y
Sbjct: 1   MAIAFARGLRKASSFLRSS---YPLLISSRLLPISQEFYDSTLTFVLPTRPICRNFSHGY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           G+VNLVIS+GKPKFET E+DPPKK KW TKK+LK                      +K K
Sbjct: 61  GTVNLVISEGKPKFETRELDPPKKYKWLTKKRLK----------------------LKRK 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
           K+++  NA  R   +                  + + KK  F++       +L+      
Sbjct: 121 KEREERNAANRKDPRR----------------LTVKGKKKKFVNAEERIKYKLE------ 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
               +A+IKEALLIERLKRYEV +VQGP V PH +T EERFY+KKMGQKRSNYVPIGRRG
Sbjct: 181 ----KAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMH+HWKKHETVKV C   KPGQV +YA+E+A+LSGG+P+ IIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           K YVQP+VMSPIDTLSKKRA EKSKYEQSLESVR FIAIAEKELELYYRHVALY DPN+R
Sbjct: 301 KGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALYDDPNNR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 420
           NPLSILD   D+   S +H  +E            SD  +    E  D+E  E+ +  + 
Sbjct: 361 NPLSILD---DSPSESRQHHENEF-------FLSCSDTDSSSEDEDEDEELCEL-DNGSS 371

Query: 421 SCFSTSESEFESD 434
           S  S  E   ES+
Sbjct: 421 SSSSAKEELSESE 371

[Close]

BLAST of CmoCh14G005660.1 vs. TAIR10
Match: AT4G13070.1 (AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-57
Identity = 107/185 (57.84%), Postives = 141/185 (76.22%), Query Frame = 1


Query: 176 DVTVIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVP 235
           +V +   L +A+ KE  LIE+L++Y+VP+      +P +LT EE+ Y+K+ G+KR N+V 
Sbjct: 143 EVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVL 202

Query: 236 IGRRGVFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQEIARLSGGIPIQIIGDDT 295
           +GRRGVFGGV+LN+H+HWKKHETVKV CKPC KPGQVHEYA+E+ARLS GI I +  ++T
Sbjct: 203 VGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNT 262

Query: 296 IIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALY 355
           I+ YRGK YV+PEVMSP+DTLSK +ALEK +YEQSLE    FI   EKELE Y+++VA +
Sbjct: 263 IVLYRGKNYVRPEVMSPVDTLSKDKALEKYRYEQSLEHTSEFIEKLEKELEEYHKYVARH 322

Query: 356 GDPND 360
               D
Sbjct: 323 KKKKD 327

[Close]

BLAST of CmoCh14G005660.1 vs. TAIR10
Match: AT3G25440.1 (AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 102/238 (42.86%), Postives = 140/238 (58.82%), Query Frame = 1


Query: 183 LLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVF 242
           L +AR KE  L+E +K+ E         +P  LT EE FY  KMG K  NYVP+GRRG++
Sbjct: 145 LRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIY 204

Query: 243 GGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKE 302
            GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII YRGK 
Sbjct: 205 QGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKN 264

Query: 303 YVQP--EVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 362
           YVQP  E+MSP  TL +K+AL+KSK   +L +VR++I   E+EL+L     A      D 
Sbjct: 265 YVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRDY 324

Query: 363 NPLSILDLP--SDNLKNSLKHQVDEMEDSH---SAALCLASDVMNKRNPEFSDDESLE 414
             + + D    S+ LK  ++   + +ED      A L LA+D  +  +  F  D  LE
Sbjct: 325 TNVKVDDNQERSEELKKIIERSEECLEDEQEEDEAGLELATD--SDLSDIFETDSELE 377

[Close]

BLAST of CmoCh14G005660.1 vs. TAIR10
Match: AT3G27550.1 (AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-36
Identity = 105/315 (33.33%), Postives = 170/315 (53.97%), Query Frame = 1


Query: 179 VIVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 238
           +I  L +A+ K ALL+++LK+Y++P +  PV +P   T+E+    KK+G K  NYVP+G 
Sbjct: 56  LIYNLKRAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGV 115

Query: 239 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 298
           RGVFGGV+ NMHMHWK HETV+V C      ++ E A  IARLSGG+ I I    TII +
Sbjct: 116 RGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMF 175

Query: 299 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 358
           RG+ Y QP+ + P++TL+K++AL K+++EQ+LES +  I   E++L    R + +    N
Sbjct: 176 RGRNYRQPKNLIPVNTLTKRKALFKARFEQALESQKLNIKKTEQQL----RRMGV----N 235

Query: 359 DRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEF 418
             +P+++  +    + ++  + +D+ E           D  ++R     + E  E G+E 
Sbjct: 236 PEDPVAMASI--HRVASTFFNAIDKKE---GTPYVFHGDKQSERGTSVDNREESEPGDED 295

Query: 419 AD---------SCFSTSESEF-ESDILDDFEHGRIE-------GSFSQTGEMSSTTMNTC 477
           +D              ++ E+ E +  +  E GRI           S+T E+ S    + 
Sbjct: 296 SDQEELDRFIAEIEEAADKEWEEEEAAEQEESGRIRYWNREEFAGRSRTPELRSYGDASH 355

[Close]

BLAST of CmoCh14G005660.1 vs. TAIR10
Match: AT3G01370.1 (AT3G01370.1 CRM family member 2)

HSP 1 Score: 99.8 bits (247), Expect = 5.0e-21
Identity = 89/371 (23.99%), Postives = 167/371 (45.01%), Query Frame = 1


Query: 124 KFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVIL 183
           K +  EE IK +  K  +     +    + + Q K     S      A L++    + + 
Sbjct: 494 KLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNS----PEAILEKTSMKLSMA 553

Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ +     ++  L+  E P++    ++   +T +E++ ++K+G K   ++ +GRRGVF 
Sbjct: 554 LEKKANAEKVLADLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFD 613

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRG 303
           G I NMH+HWK  E VK+ C        H+ A+ +   SGGI +    +     II YRG
Sbjct: 614 GTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRG 673

Query: 304 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND- 363
           K Y +P+ + P   LSK+ AL++S   Q  +S++  +      +E   R +      N+ 
Sbjct: 674 KNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNET 733

Query: 364 ----RNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIG 423
                +   +++  ++N     +   +++E  +S+ L + S          S +E+ E  
Sbjct: 734 WSDGESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPS----------SGEENWEDD 793

Query: 424 EEFADSCFSTSESEFESDILDDFEHGRIEGS----------FSQTGEMSSTTMNTCSASQ 477
            E      +TS  E++ D  +     R EG+          F++TG  ++++ +  S   
Sbjct: 794 SEGEVDPLTTSSQEYQEDESESASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPH 848

[Close]

BLAST of CmoCh14G005660.1 vs. NCBI nr
Match: gi|659085302|ref|XP_008443348.1| (PREDICTED: uncharacterized protein LOC103486957 [Cucumis melo])

HSP 1 Score: 663.7 bits (1711), Expect = 2.5e-187
Identity = 358/478 (74.90%), Postives = 390/478 (81.59%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQ  FRP+L +PD+ FS+IKNFP  NISKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV++QGKPKFETH VDPPKK+KWKTKKKLKMQR R KQKRK               
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRK--------------- 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
              K    + R+K K                     KK+ +       +AAE  ++    
Sbjct: 121 AANKRDPRQLRVKGK---------------------KKQKF------PNAAERIKNK--- 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
             L +ARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFY+KKMGQKRSNYVPIGRRG
Sbjct: 181 --LERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMGQKRSNYVPIGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           KEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDR
Sbjct: 301 KEYVQPEVMSPIGTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 420
           NPLSIL++PSDNLKNS KHQ+  MEDSHSAALCL SDVMN+RNP+FSDDESL+IG+EF D
Sbjct: 361 NPLSILNVPSDNLKNSDKHQITNMEDSHSAALCLESDVMNQRNPDFSDDESLDIGDEFGD 420

Query: 421 SCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           +CFSTSES+FESD LD+ + GRIE S SQT EM STTMNTCSA QNK EFH QELPIH
Sbjct: 421 ACFSTSESDFESDKLDESDDGRIEVSVSQTEEMFSTTMNTCSAFQNKCEFHKQELPIH 431

[Close]

BLAST of CmoCh14G005660.1 vs. NCBI nr
Match: gi|449437795|ref|XP_004136676.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus])

HSP 1 Score: 647.1 bits (1668), Expect = 2.4e-182
Identity = 352/478 (73.64%), Postives = 388/478 (81.17%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60
           MAKSLFHNLRRA LLFRSSSLNQ  FRP+L +PD+ FS+IK FP  NISKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRAPLLFRSSSLNQLSFRPILEIPDTVFSQIKKFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR R KQKRK               
Sbjct: 61  GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMRLKQKRK--------------- 120

Query: 121 KKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVI 180
              K    + R+K K                     KK+ +       +AAE  ++    
Sbjct: 121 AANKRDPRQLRVKGK---------------------KKQKF------PNAAERIKNK--- 180

Query: 181 VILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRG 240
             L  ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMGQKRSNYVPIGRRG
Sbjct: 181 --LENARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRG 240

Query: 241 VFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300
           VFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG
Sbjct: 241 VFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRG 300

Query: 301 KEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDR 360
           K+YVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDR
Sbjct: 301 KDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDR 360

Query: 361 NPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 420
           NPLSIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FSDDESL+IG+ FAD
Sbjct: 361 NPLSILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFSDDESLDIGDGFAD 420

Query: 421 SCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           +CFSTSES+FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK EFH QELPIH
Sbjct: 421 ACFSTSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNKCEFHKQELPIH 430

[Close]

BLAST of CmoCh14G005660.1 vs. NCBI nr
Match: gi|700204381|gb|KGN59514.1| (hypothetical protein Csa_3G823620 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 1.6e-141
Identity = 255/295 (86.44%), Postives = 278/295 (94.24%), Query Frame = 1


Query: 184 LQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFG 243
           L+ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMGQKRSNYVPIGRRGVFG
Sbjct: 115 LRARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRGVFG 174

Query: 244 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEY 303
           GVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGK+Y
Sbjct: 175 GVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY 234

Query: 304 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPL 363
           VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPNDRNPL
Sbjct: 235 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNDRNPL 294

Query: 364 SILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCF 423
           SIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FSDDESL+IG+ FAD+CF
Sbjct: 295 SILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFSDDESLDIGDGFADACF 354

Query: 424 STSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 479
           STSES+FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK EFH QELPIH
Sbjct: 355 STSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNKCEFHKQELPIH 408

[Close]

BLAST of CmoCh14G005660.1 vs. NCBI nr
Match: gi|802554972|ref|XP_012065185.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas])

HSP 1 Score: 439.9 bits (1130), Expect = 5.8e-120
Identity = 251/430 (58.37%), Postives = 299/430 (69.53%), Query Frame = 1


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPF-FRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLS 60
           MA +LF  LRRASLL + SS   PF FRP+    +S FS+ +    LN+  P L  RNLS
Sbjct: 1   MAGALFRCLRRASLLVKPSSSLNPFTFRPIFDYAESVFSQSRVISQLNLPNPSLVLRNLS 60

Query: 61  YGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKG 120
           +G+VNLVIS+GKPKFE HEVDPPKK+KW+TKK+LKMQRKREKQKR               
Sbjct: 61  HGNVNLVISEGKPKFEIHEVDPPKKEKWQTKKRLKMQRKREKQKR--------------- 120

Query: 121 KKKQKFSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTV 180
                  +A +R   +L                   +KKK  F +       +L+R    
Sbjct: 121 ------KDANKRDPRRLTVK----------------RKKKQKFANAEERIKFKLER---- 180

Query: 181 IVILLQARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRR 240
                 A+IKEA LIERLKRYEVP+VQGP V+PH+LT EERF++KKMGQK+SNYVPIGRR
Sbjct: 181 ------AKIKEAALIERLKRYEVPKVQGPEVKPHDLTGEERFFVKKMGQKKSNYVPIGRR 240

Query: 241 GVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYR 300
           GVFGGVILNMHMHWKKHETVKV CK CKPGQ+HEYAQEIARLSGGIPI  IGDDT+IFYR
Sbjct: 241 GVFGGVILNMHMHWKKHETVKVICKHCKPGQLHEYAQEIARLSGGIPIHFIGDDTVIFYR 300

Query: 301 GKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND 360
           GK YVQP+VMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH+ALYGDPN+
Sbjct: 301 GKNYVQPKVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNN 360

Query: 361 RNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFA 420
           RNPLSIL+  S++ K S K +      + + +    S  +++   + +D +  EI ++F 
Sbjct: 361 RNPLSILNTSSNDFKESGKPK----NKNSNLSFYGTSPGVSETEVDSTDGDLSEIEDDFE 379

Query: 421 DSCFSTSESE 430
           D   S SES+
Sbjct: 421 DEDLSASESD 379

[Close]

BLAST of CmoCh14G005660.1 vs. NCBI nr
Match: gi|567901040|ref|XP_006443008.1| (hypothetical protein CICLE_v10020228mg [Citrus clementina])

HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116
Identity = 250/469 (53.30%), Postives = 307/469 (65.46%), Query Frame = 1


Query: 5   LFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSYGSVN 64
           LFHNLR+AS L +  SL     R +L  P S      +        P   +RN+S+G+VN
Sbjct: 6   LFHNLRKASALNKFLSL-----RSILRAPQSVLCPYSHLGPPKPINPSWVWRNVSHGTVN 65

Query: 65  LVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQK 124
           LVIS+GKPKFETHEV PPKK+KW+TKK+ K+++KREKQK                     
Sbjct: 66  LVISEGKPKFETHEVHPPKKEKWQTKKRFKLKKKREKQK--------------------- 125

Query: 125 FSNAEERIKHKLEKSSLFYGITNVFGEVCSFQKKKNYFMSISLHSAAELQRDVTVIVILL 184
             +A +R   +L                   +KKK  F +       +L+          
Sbjct: 126 RKDANKRDPRRLTVKG---------------KKKKQKFANAEDRIKYKLE---------- 185

Query: 185 QARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGG 244
           +A+IKEALLIERLKRYEVP+VQGPVV+PH LT EERFY KKM QKRSNYVPIGRRGVFGG
Sbjct: 186 KAKIKEALLIERLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRRGVFGG 245

Query: 245 VILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYV 304
           VILNMHMHWKKHETVKVFCKP KPGQ+HE+A+EIARLSGGIPIQIIGDDT+IFYRGK YV
Sbjct: 246 VILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDTVIFYRGKNYV 305

Query: 305 QPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLS 364
           QPE+MSPIDTLSKK+ALEKSKYEQSLESVRRFIA+AEKELELYYRH+ALYGDPN+RNP+S
Sbjct: 306 QPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIALYGDPNNRNPMS 365

Query: 365 ILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCFS 424
           I+D PS   + S K ++ E +   S    L+       +   S D++L   +   D   S
Sbjct: 366 IMDNPSKVTQESWKFKMVERKSLDSTYDALSPGASEAESD--STDQTLSELDYIEDEGLS 421

Query: 425 TSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQ 474
           TSES+ + D   DF+    + S S+  E+S T   + S S+  ++ +NQ
Sbjct: 426 TSESDSQDDSSSDFDSKESQVSSSRMRELSFTMSGSSSMSKTLYDSNNQ 421

The following BLAST results are available for this feature:

BLAST of CmoCh14G005660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3544_ARATH	2.5e-38	42.86	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
CFM2_ARATH	8.9e-20	23.99	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2...	[more]
CFM3B_ARATH	1.4e-17	29.91	CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana GN=CFM...	[more]
CFM3A_ARATH	4.1e-17	29.13	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
CFM3_ORYSJ	1.6e-16	26.30	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]

BLAST of CmoCh14G005660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF61_CUCSA	1.1e-141	86.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823620 PE=4 SV=1	[more]
V4T7K8_9ROSI	1.2e-116	53.30	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020228mg PE=4 SV=1	[more]
A0A059DBD5_EUCGR	5.6e-114	52.30	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00093 PE=4 SV=1	[more]
A0A0L9V745_PHAAN	2.1e-113	54.51	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g164000 PE=4 SV=1	[more]
A0A0S3SDE1_PHAAN	2.1e-113	54.51	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G212600 PE=...	[more]

BLAST of CmoCh14G005660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28480.1	6.6e-98	50.81	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	1.9e-57	57.84	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	1.4e-39	42.86	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	1.9e-36	33.33	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G01370.1	5.0e-21	23.99	CRM family member 2	[more]

BLAST of CmoCh14G005660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085302\|ref\|XP_008443348.1\|	2.5e-187	74.90	PREDICTED: uncharacterized protein LOC103486957 [Cucumis melo]	[more]
gi\|449437795\|ref\|XP_004136676.1\|	2.4e-182	73.64	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|700204381\|gb\|KGN59514.1\|	1.6e-141	86.44	hypothetical protein Csa_3G823620 [Cucumis sativus]	[more]
gi\|802554972\|ref\|XP_012065185.1\|	5.8e-120	58.37	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|567901040\|ref\|XP_006443008.1\|	1.7e-116	53.30	hypothetical protein CICLE_v10020228mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001890	RNA-binding_CRM

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh14G005660	CmoCh14G005660	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh14G005660.1	CmoCh14G005660.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G005660.1.three_prime_UTR.1	CmoCh14G005660.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G005660.1.CDS.5	CmoCh14G005660.1.CDS.5	CDS
CmoCh14G005660.1.CDS.4	CmoCh14G005660.1.CDS.4	CDS
CmoCh14G005660.1.CDS.3	CmoCh14G005660.1.CDS.3	CDS
CmoCh14G005660.1.CDS.2	CmoCh14G005660.1.CDS.2	CDS
CmoCh14G005660.1.CDS.1	CmoCh14G005660.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G005660.1.five_prime_UTR.2	CmoCh14G005660.1.five_prime_UTR.2	five_prime_UTR
CmoCh14G005660.1.five_prime_UTR.1	CmoCh14G005660.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G005660.1.exon.6	CmoCh14G005660.1.exon.6	exon
CmoCh14G005660.1.exon.5	CmoCh14G005660.1.exon.5	exon
CmoCh14G005660.1.exon.4	CmoCh14G005660.1.exon.4	exon
CmoCh14G005660.1.exon.3	CmoCh14G005660.1.exon.3	exon
CmoCh14G005660.1.exon.2	CmoCh14G005660.1.exon.2	exon
CmoCh14G005660.1.exon.1	CmoCh14G005660.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	GENE3D	G3DSA:3.30.110.60		coord: 214..309 score: 2.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 215..299 score: 3.8
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 215..299 score: 4.3
IPR001890	RNA-binding, CRM domain	PROFILE	PS51295	CRM	coord: 213..310 score: 18
IPR001890	RNA-binding, CRM domain	unknown	SSF75471	YhbY-like	coord: 214..309 score: 7.59
None	No IPR available	unknown	Coil	Coil	coord: 90..110 scor
None	No IPR available	PANTHER	PTHR31426	FAMILY NOT NAMED	coord: 4..138 score: 1.8E-215coord: 186..439 score: 1.8E
None	No IPR available	PANTHER	PTHR31426:SF2	SUBFAMILY NOT NAMED	coord: 4..138 score: 1.8E-215coord: 186..439 score: 1.8E