CmoCh11G013800 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G013800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRapid alkalinization factor
LocationCmo_Chr11 : 9642388 .. 9642753 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACAATGAAGCTCTCCATCTTTATCCTCCTCGTCTTTGTCGTAGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTTGTCAACGATAATGCTGCATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCCCGCAAGAGGTATTTAAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

mRNA sequence

ATGGGAACAATGAAGCTCTCCATCTTTATCCTCCTCGTCTTTGTCGTAGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTTGTCAACGATAATGCTGCATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCCCGCAAGAGGTATTTAAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

Coding sequence (CDS)

ATGGGAACAATGAAGCTCTCCATCTTTATCCTCCTCGTCTTTGTCGTAGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTTGTCAACGATAATGCTGCATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCCCGCAAGAGGTATTTAAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA
Homology
[Close]
BLAST of CmoCh11G013800 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14
Identity = 50/113 (44.25%), Postives = 62/113 (54.87%), Query Frame = 1 

Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    +   S VN        G       +E +RRQL        
Sbjct: 6   LLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]
BLAST of CmoCh11G013800 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.3e-14
Identity = 50/119 (42.02%), Postives = 65/119 (54.62%), Query Frame = 1 

Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           MG   L IF LL+  +      A +  +   S +N            S   +E +RRQL 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTK--SCINGQGCIGEDDELESLMDSETNRRQLA 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           +          +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 61  R---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of CmoCh11G013800 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1 

Query: 29  NASSLVNDNAAYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRYLSYYALRQNNI 88
           + S+ + D     + GG+  E    DS   RR L          A +RY+SY ALR+N I
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTI 114

Query: 89  PCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 115 PCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmoCh11G013800 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1 

Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]
BLAST of CmoCh11G013800 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-10
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1 

Query: 37  NAAYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYD 96
           ++ +S   G  +E + E+   + F         A+K+Y+SY A+R+N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 97  CKKRRRINPYRRGCAAITGCAR 119
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmoCh11G013800 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-24
Identity = 68/121 (56.20%), Postives = 79/121 (65.29%), Query Frame = 1 

Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           M + KL +F+LL+ VVA PL  AL +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + +YL Y ALR+NNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]
BLAST of CmoCh11G013800 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.1e-21
Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 4   MKLSI-FILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTE--DSRRQLF 63
           MKL +  +LLV  +A+ L  AL + + A      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + +YL Y ALR+NN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmoCh11G013800 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.3e-14
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ Y+SY AL++NN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmoCh11G013800 vs. TrEMBL
Match: A0A078FRQ3_BRANA (BnaA05g09880D protein OS=Brassica napus GN=BnaA05g09880D PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 51/113 (45.13%), Postives = 63/113 (55.75%), Query Frame = 1 

Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    S   S VN         G  S   +E +RRQL        
Sbjct: 6   LLILCLLTLAVVAESANVTWSLTRSCVNGQGCIGDDDGLESLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+RY+SY AL++NN+PC RRG SYYDC KR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRRYISYGALKKNNVPCSRRGRSYYDCTKRKRANPYRRGCSIITHCYRLT 109

[Close]
BLAST of CmoCh11G013800 vs. TrEMBL
Match: M4CMN5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 51/113 (45.13%), Postives = 63/113 (55.75%), Query Frame = 1 

Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    S   S VN         G  S   +E +RRQL        
Sbjct: 6   LLILCLLTLAVVAESANVTWSLTRSCVNGQGCIGDDDGLESLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+RY+SY AL++NN+PC RRG SYYDC KR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRRYISYGALKKNNVPCSRRGRSYYDCTKRKRANPYRRGCSIITHCYRLT 109

[Close]
BLAST of CmoCh11G013800 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15
Identity = 50/113 (44.25%), Postives = 62/113 (54.87%), Query Frame = 1 

Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    +   S VN        G       +E +RRQL        
Sbjct: 6   LLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]
BLAST of CmoCh11G013800 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-15
Identity = 50/119 (42.02%), Postives = 65/119 (54.62%), Query Frame = 1 

Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           MG   L IF LL+  +      A +  +   S +N            S   +E +RRQL 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTK--SCINGQGCIGEDDELESLMDSETNRRQLA 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           +          +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 61  R---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of CmoCh11G013800 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 70.9 bits (172), Expect = 6.3e-13
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1 

Query: 29  NASSLVNDNAAYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRYLSYYALRQNNI 88
           + S+ + D     + GG+  E    DS   RR L          A +RY+SY ALR+N I
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTI 114

Query: 89  PCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 115 PCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmoCh11G013800 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1 

Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]
BLAST of CmoCh11G013800 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1 

Query: 37  NAAYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYD 96
           ++ +S   G  +E + E+   + F         A+K+Y+SY A+R+N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 97  CKKRRRINPYRRGCAAITGCAR 119
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmoCh11G013800 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 9.7e-24
Identity = 68/121 (56.20%), Postives = 79/121 (65.29%), Query Frame = 1 

Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           M + KL +F+LL+ VVA PL  AL +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + +YL Y ALR+NNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]
BLAST of CmoCh11G013800 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 6.3e-23
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 1 

Query: 1   MGTMKLSIFILLVFVVAVPLSFALHET-SNASSLVNDNAAYSFFGGDSSEAMTEDSRRQL 60
           M +MKL +F+L++ VVA PL  A  +  ++A +  N    Y F   +      EDSRR L
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAAPN----YDFTTNN------EDSRRLL 60

Query: 61  FQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGF Y K  + +YL Y ALR+NN PC  RG SYYDCKKRR+ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARF 111

Query: 121 TD 122
           TD
Sbjct: 121 TD 111

[Close]
BLAST of CmoCh11G013800 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20
Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 4   MKLSI-FILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTE--DSRRQLF 63
           MKL +  +LLV  +A+ L  AL + + A      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + +YL Y ALR+NN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmoCh11G013800 vs. NCBI nr
Match: gi|729376459|ref|XP_010549330.1| (PREDICTED: protein RALF-like 19 [Tarenaya hassleriana])

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-15
Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 12  LVFVVAVPLSFALHETSNAS-----SLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVY 71
           L+FV A+     + E++NAS     S VN         G  +   +E +RRQL Q     
Sbjct: 5   LLFVFALLTLAMVAESANASWPLTKSCVNGEGCIGDEDGVETLMDSETNRRQLAQ----- 64

Query: 72  NKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
                +RY+SY ALR+NN+PC RRG SYYDC++R+R+NPYRRGC+ IT CARFT
Sbjct: 65  ----GRRYISYGALRKNNVPCSRRGRSYYDCRRRKRVNPYRRGCSVITHCARFT 109

[Close]
BLAST of CmoCh11G013800 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 88.6 bits (218), Expect = 8.2e-15
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 1 

Query: 4   MKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYG 63
           +KL +  LL+ +  V  + + H+ S     ++  +   F G D+   M  ++ R+    G
Sbjct: 3   VKLCLIFLLLALAVVAEASSFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAGG 62

Query: 64  FVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 122
                   ++Y+SY AL++N +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  --------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

The following BLAST results are available for this feature:
BLAST of CmoCh11G013800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF19_ARATH3.1e-1444.25Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1[more]
RLF4_ARATH5.3e-1442.02Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1[more]
RLF23_ARATH1.1e-1143.01Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
RLF33_ARATH1.2e-1057.14Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1[more]
RLF22_ARATH2.7e-1039.02Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of CmoCh11G013800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHU4_CUCSA6.8e-2456.20Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1[more]
A0A0A0KCD7_CUCSA9.1e-2152.89F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1[more]
R0HVQ3_9BRAS6.3e-1459.42Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1[more]
A0A078FRQ3_BRANA2.4e-1345.13BnaA05g09880D protein OS=Brassica napus GN=BnaA05g09880D PE=4 SV=1[more]
M4CMN5_BRARP2.4e-1345.13Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of CmoCh11G013800 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33775.11.8e-1544.25 ralf-like 19[more]
AT1G28270.13.0e-1542.02 ralf-like 4[more]
AT3G16570.16.3e-1343.01 rapid alkalinization factor 23[more]
AT4G15800.16.9e-1257.14 ralf-like 33[more]
AT3G05490.11.5e-1139.02 ralf-like 22[more]
BLAST of CmoCh11G013800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461879|ref|XP_004148669.1|9.7e-2456.20PREDICTED: protein RALF-like 19 [Cucumis sativus][more]
gi|659080853|ref|XP_008441015.1|6.3e-2354.92PREDICTED: protein RALF-like 19 [Cucumis melo][more]
gi|449466199|ref|XP_004150814.1|1.3e-2052.89PREDICTED: protein RALF-like 4 [Cucumis sativus][more]
gi|729376459|ref|XP_010549330.1|2.2e-1546.49PREDICTED: protein RALF-like 19 [Tarenaya hassleriana][more]
gi|1009109354|ref|XP_015889777.1|8.2e-1538.98PREDICTED: protein RALF-like 19 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G013800.1CmoCh11G013800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 53..118
score: 7.0
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 8..120
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G013800CmaCh11G017330Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G013800Cp4.1LG04g07980Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G013800Carg26846Silver-seed gourdcarcmoB0018
CmoCh11G013800Carg26397Silver-seed gourdcarcmoB1085
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G013800Watermelon (97103) v2cmowmbB078
CmoCh11G013800Watermelon (97103) v2cmowmbB088
CmoCh11G013800Watermelon (97103) v2cmowmbB111
CmoCh11G013800Watermelon (97103) v2cmowmbB128
CmoCh11G013800Wax gourdcmowgoB0104
CmoCh11G013800Wax gourdcmowgoB0110
CmoCh11G013800Wax gourdcmowgoB0124
CmoCh11G013800Cucurbita moschata (Rifu)cmocmoB131
CmoCh11G013800Cucurbita moschata (Rifu)cmocmoB096
CmoCh11G013800Cucurbita moschata (Rifu)cmocmoB105
CmoCh11G013800Cucurbita moschata (Rifu)cmocmoB110
CmoCh11G013800Cucurbita moschata (Rifu)cmocmoB125
CmoCh11G013800Cucurbita moschata (Rifu)cmocmoB129
CmoCh11G013800Cucumber (Gy14) v1cgycmoB0624
CmoCh11G013800Cucumber (Gy14) v1cgycmoB0684
CmoCh11G013800Cucumber (Gy14) v1cgycmoB1084
CmoCh11G013800Cucurbita maxima (Rimu)cmacmoB318
CmoCh11G013800Cucurbita maxima (Rimu)cmacmoB494
CmoCh11G013800Cucurbita maxima (Rimu)cmacmoB678
CmoCh11G013800Cucurbita maxima (Rimu)cmacmoB761
CmoCh11G013800Cucurbita maxima (Rimu)cmacmoB842
CmoCh11G013800Bottle gourd (USVL1VR-Ls)cmolsiB093
CmoCh11G013800Wild cucumber (PI 183967)cmocpiB120
CmoCh11G013800Wild cucumber (PI 183967)cmocpiB136
CmoCh11G013800Cucumber (Chinese Long) v2cmocuB107
CmoCh11G013800Cucumber (Chinese Long) v2cmocuB117
CmoCh11G013800Cucumber (Chinese Long) v2cmocuB137
CmoCh11G013800Melon (DHL92) v3.5.1cmomeB085
CmoCh11G013800Melon (DHL92) v3.5.1cmomeB114
CmoCh11G013800Melon (DHL92) v3.5.1cmomeB128
CmoCh11G013800Melon (DHL92) v3.5.1cmomeB133
CmoCh11G013800Watermelon (Charleston Gray)cmowcgB088
CmoCh11G013800Watermelon (Charleston Gray)cmowcgB086
CmoCh11G013800Watermelon (Charleston Gray)cmowcgB109
CmoCh11G013800Watermelon (Charleston Gray)cmowcgB123
CmoCh11G013800Watermelon (97103) v1cmowmB081
CmoCh11G013800Watermelon (97103) v1cmowmB098
CmoCh11G013800Watermelon (97103) v1cmowmB106
CmoCh11G013800Watermelon (97103) v1cmowmB109
CmoCh11G013800Cucurbita pepo (Zucchini)cmocpeB087
CmoCh11G013800Cucurbita pepo (Zucchini)cmocpeB092
CmoCh11G013800Cucurbita pepo (Zucchini)cmocpeB095
CmoCh11G013800Cucurbita pepo (Zucchini)cmocpeB114
CmoCh11G013800Bottle gourd (USVL1VR-Ls)cmolsiB103
CmoCh11G013800Bottle gourd (USVL1VR-Ls)cmolsiB113
CmoCh11G013800Bottle gourd (USVL1VR-Ls)cmolsiB116
CmoCh11G013800Bottle gourd (USVL1VR-Ls)cmolsiB140
CmoCh11G013800Cucumber (Gy14) v2cgybcmoB156
CmoCh11G013800Cucumber (Gy14) v2cgybcmoB270
CmoCh11G013800Cucumber (Gy14) v2cgybcmoB881
CmoCh11G013800Melon (DHL92) v3.6.1cmomedB091
CmoCh11G013800Melon (DHL92) v3.6.1cmomedB123
CmoCh11G013800Melon (DHL92) v3.6.1cmomedB139
CmoCh11G013800Melon (DHL92) v3.6.1cmomedB143
CmoCh11G013800Melon (DHL92) v3.6.1cmomedB146
CmoCh11G013800Silver-seed gourdcarcmoB0256
CmoCh11G013800Silver-seed gourdcarcmoB0401
CmoCh11G013800Silver-seed gourdcarcmoB0508
CmoCh11G013800Cucumber (Chinese Long) v3cmocucB0121
CmoCh11G013800Cucumber (Chinese Long) v3cmocucB0133
CmoCh11G013800Cucumber (Chinese Long) v3cmocucB0136
CmoCh11G013800Cucumber (Chinese Long) v3cmocucB0146
CmoCh11G013800Cucumber (Chinese Long) v3cmocucB0160