CmaCh11G017330 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G017330
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionralf-like 19
LocationCma_Chr11 : 11514860 .. 11515225 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD
Homology
[Close]
BLAST of CmaCh11G017330 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmaCh11G017330 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 1 

Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESM--TEDSRRQ 60
           M    + +F LL+ A+VA    A    +Y  +    N +      D  ES+  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNA----TYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           L +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]
BLAST of CmaCh11G017330 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 1 

Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGC 117
           A K++++Y AL KN++PC RRG+SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]
BLAST of CmaCh11G017330 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-10
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1 

Query: 31  SSLVDDNSKYSFFGGDSSESMTEDS---RRQLFQYGFAYNTEARKRFLTYYALSKNNIPC 90
           S+ + D     + GG+  E    DS   RR L          A +R+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmaCh11G017330 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1 

Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  ++++Y AL +N +PC RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]
BLAST of CmaCh11G017330 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-23
Identity = 65/121 (53.72%), Postives = 75/121 (61.98%), Query Frame = 1 

Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M + K+CLFLLL+  V AP  +A  +        D    Y+        +  EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSD--------DWTRSYADVPDYDFTNSNEDSRRLLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAY     K +L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYKYPKNK-YLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]
BLAST of CmaCh11G017330 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-19
Identity = 62/120 (51.67%), Postives = 74/120 (61.67%), Query Frame = 1 

Query: 4   MKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTE--DSRRQLFQ 63
           MK+ L LLL+ A +A   +       D +    N  Y+F+G     ++ +  DSRR LFQ
Sbjct: 1   MKLGLCLLLLVAAIA---ITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQ 60

Query: 64  YGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           YGFAY     K +L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFTD
Sbjct: 61  YGFAYKYPKNK-YLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]
BLAST of CmaCh11G017330 vs. TrEMBL
Match: M5X4H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026481mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 1 

Query: 5   KICLFLLLV-FAVVAPFSVAFHETSY--------DSSLVDD-NSKYSFFGGDSSESM--T 64
           K+CL +L+V  A+VA  S   HE S+        D SL+D  NSK     G+ +E M  +
Sbjct: 4   KVCLIVLMVVLAMVAQSSAKGHEASWGLSFTAHDDESLIDRANSKVGDMIGEENEMMMDS 63

Query: 65  EDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAA 119
           E SRR L          A+ R++ Y AL +N +PCGRRG SYY+C+ R+R NPY+RGC  
Sbjct: 64  ESSRRTL--------RGAQGRYIAYGALRRNAVPCGRRGQSYYNCQNRQRANPYQRGCTI 121

[Close]
BLAST of CmaCh11G017330 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 1 

Query: 46  DSSESM--TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRI 105
           D  ES+  +E +RRQL          AR+ +++Y AL KNN+PCGRRG SYYDCKKR+R 
Sbjct: 42  DELESLMDSEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRA 101

Query: 106 NPYRRGCAAITGCARFT 121
           NPYRRGC+ IT C R T
Sbjct: 102 NPYRRGCSVITHCYRQT 109

[Close]
BLAST of CmaCh11G017330 vs. TrEMBL
Match: M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-13
Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 46  DSSESM--TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRI 105
           D  ES+  +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR 
Sbjct: 27  DELESLMDSETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRN 86

Query: 106 NPYRRGCAAITGCARFTD 122
           NPYRRGC+AIT C RF +
Sbjct: 87  NPYRRGCSAITHCYRFLE 95

[Close]
BLAST of CmaCh11G017330 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-16
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmaCh11G017330 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14
Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 1 

Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESM--TEDSRRQ 60
           M    + +F LL+ A+VA    A    +Y  +    N +      D  ES+  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNA----TYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           L +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]
BLAST of CmaCh11G017330 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1 

Query: 31  SSLVDDNSKYSFFGGDSSESMTEDS---RRQLFQYGFAYNTEARKRFLTYYALSKNNIPC 90
           S+ + D     + GG+  E    DS   RR L          A +R+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmaCh11G017330 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 63.9 bits (154), Expect = 7.7e-11
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1 

Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  ++++Y AL +N +PC RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]
BLAST of CmaCh11G017330 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 1 

Query: 11  LLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEA 70
           +L   + A  S      S D      +S +S   G  +E + E+   + F    +    A
Sbjct: 13  ILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRRILA 72

Query: 71  RKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           +K++++Y A+ +N++PC RRG+SYY+C++  + NPY RGC+ IT C R
Sbjct: 73  QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmaCh11G017330 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 6.3e-23
Identity = 65/121 (53.72%), Postives = 75/121 (61.98%), Query Frame = 1 

Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M + K+CLFLLL+  V AP  +A  +        D    Y+        +  EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSD--------DWTRSYADVPDYDFTNSNEDSRRLLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAY     K +L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYKYPKNK-YLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]
BLAST of CmaCh11G017330 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-22
Identity = 66/121 (54.55%), Postives = 76/121 (62.81%), Query Frame = 1 

Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M +MK+ LFLL++  V AP  +AF +   D +       Y F       +  EDSRR LF
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSD---DWTHAYAAPNYDF------TTNNEDSRRLLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAY     K +L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYKYPKNK-YLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFT 111

Query: 121 D 122
           D
Sbjct: 121 D 111

[Close]
BLAST of CmaCh11G017330 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-19
Identity = 62/120 (51.67%), Postives = 74/120 (61.67%), Query Frame = 1 

Query: 4   MKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTE--DSRRQLFQ 63
           MK+ L LLL+ A +A   +       D +    N  Y+F+G     ++ +  DSRR LFQ
Sbjct: 1   MKLGLCLLLLVAAIA---ITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQ 60

Query: 64  YGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           YGFAY     K +L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFTD
Sbjct: 61  YGFAYKYPKNK-YLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]
BLAST of CmaCh11G017330 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-17
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 1 

Query: 4   MKICL-FLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQY 63
           +K+CL FLLL  AVVA  S +FH+ S+    +   S   F G D+   M  ++ R+    
Sbjct: 3   VKLCLIFLLLALAVVAEAS-SFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAG 62

Query: 64  GFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           G        +++++Y AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  G--------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

[Close]
BLAST of CmaCh11G017330 vs. NCBI nr
Match: gi|595883298|ref|XP_007212761.1| (hypothetical protein PRUPE_ppa026481mg [Prunus persica])

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13
Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 1 

Query: 5   KICLFLLLV-FAVVAPFSVAFHETSY--------DSSLVDD-NSKYSFFGGDSSESM--T 64
           K+CL +L+V  A+VA  S   HE S+        D SL+D  NSK     G+ +E M  +
Sbjct: 4   KVCLIVLMVVLAMVAQSSAKGHEASWGLSFTAHDDESLIDRANSKVGDMIGEENEMMMDS 63

Query: 65  EDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAA 119
           E SRR L          A+ R++ Y AL +N +PCGRRG SYY+C+ R+R NPY+RGC  
Sbjct: 64  ESSRRTL--------RGAQGRYIAYGALRRNAVPCGRRGQSYYNCQNRQRANPYQRGCTI 121

The following BLAST results are available for this feature:
BLAST of CmaCh11G017330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF19_ARATH1.1e-1456.52Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1[more]
RLF4_ARATH2.6e-1342.98Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1[more]
RALF_TOBAC2.1e-1057.45Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF23_ARATH2.7e-1040.66Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
RLF33_ARATH1.4e-0951.02Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1[more]
BLAST of CmaCh11G017330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHU4_CUCSA4.4e-2353.72Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1[more]
A0A0A0KCD7_CUCSA2.9e-1951.67F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1[more]
M5X4H7_PRUPE1.4e-1344.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026481mg PE=4 SV=1[more]
R0HVQ3_9BRAS2.4e-1355.84Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1[more]
M4EMR1_BRARP5.4e-1355.13Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of CmaCh11G017330 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33775.16.0e-1656.52 ralf-like 19[more]
AT1G28270.11.5e-1442.98 ralf-like 4[more]
AT3G16570.11.5e-1140.66 rapid alkalinization factor 23[more]
AT4G15800.17.7e-1151.02 ralf-like 33[more]
AT3G05490.11.3e-1032.41 ralf-like 22[more]
BLAST of CmaCh11G017330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461879|ref|XP_004148669.1|6.3e-2353.72PREDICTED: protein RALF-like 19 [Cucumis sativus][more]
gi|659080853|ref|XP_008441015.1|5.3e-2254.55PREDICTED: protein RALF-like 19 [Cucumis melo][more]
gi|449466199|ref|XP_004150814.1|4.2e-1951.67PREDICTED: protein RALF-like 4 [Cucumis sativus][more]
gi|1009109354|ref|XP_015889777.1|5.2e-1745.38PREDICTED: protein RALF-like 19 [Ziziphus jujuba][more]
gi|595883298|ref|XP_007212761.1|2.0e-1344.44hypothetical protein PRUPE_ppa026481mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G017330.1CmaCh11G017330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 61..118
score: 1.1
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 6..120
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh11G017330CmoCh11G013800Cucurbita moschata (Rifu)cmacmoB117
CmaCh11G017330Lsi03G010550Bottle gourd (USVL1VR-Ls)cmalsiB115
CmaCh11G017330Cp4.1LG04g07980Cucurbita pepo (Zucchini)cmacpeB154
CmaCh11G017330Carg26846Silver-seed gourdcarcmaB0018
CmaCh11G017330Carg26397Silver-seed gourdcarcmaB1113
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G017330Wax gourdcmawgoB0112
CmaCh11G017330Wax gourdcmawgoB0116
CmaCh11G017330Wax gourdcmawgoB0122
CmaCh11G017330Wax gourdcmawgoB0129
CmaCh11G017330Cucurbita maxima (Rimu)cmacmaB135
CmaCh11G017330Cucurbita maxima (Rimu)cmacmaB149
CmaCh11G017330Cucurbita maxima (Rimu)cmacmaB163
CmaCh11G017330Cucurbita maxima (Rimu)cmacmaB167
CmaCh11G017330Cucurbita maxima (Rimu)cmacmaB171
CmaCh11G017330Cucumber (Gy14) v1cgycmaB0221
CmaCh11G017330Cucumber (Gy14) v1cgycmaB0620
CmaCh11G017330Cucumber (Gy14) v1cgycmaB0684
CmaCh11G017330Cucurbita moschata (Rifu)cmacmoB133
CmaCh11G017330Cucurbita moschata (Rifu)cmacmoB143
CmaCh11G017330Cucurbita moschata (Rifu)cmacmoB161
CmaCh11G017330Cucurbita moschata (Rifu)cmacmoB156
CmaCh11G017330Wild cucumber (PI 183967)cmacpiB125
CmaCh11G017330Wild cucumber (PI 183967)cmacpiB141
CmaCh11G017330Wild cucumber (PI 183967)cmacpiB143
CmaCh11G017330Cucumber (Chinese Long) v2cmacuB128
CmaCh11G017330Cucumber (Chinese Long) v2cmacuB144
CmaCh11G017330Cucumber (Chinese Long) v2cmacuB146
CmaCh11G017330Melon (DHL92) v3.5.1cmameB098
CmaCh11G017330Melon (DHL92) v3.5.1cmameB140
CmaCh11G017330Melon (DHL92) v3.5.1cmameB144
CmaCh11G017330Watermelon (Charleston Gray)cmawcgB096
CmaCh11G017330Watermelon (Charleston Gray)cmawcgB101
CmaCh11G017330Watermelon (Charleston Gray)cmawcgB125
CmaCh11G017330Watermelon (Charleston Gray)cmawcgB126
CmaCh11G017330Watermelon (Charleston Gray)cmawcgB140
CmaCh11G017330Watermelon (97103) v1cmawmB114
CmaCh11G017330Watermelon (97103) v1cmawmB117
CmaCh11G017330Watermelon (97103) v1cmawmB127
CmaCh11G017330Cucurbita pepo (Zucchini)cmacpeB108
CmaCh11G017330Cucurbita pepo (Zucchini)cmacpeB114
CmaCh11G017330Cucurbita pepo (Zucchini)cmacpeB116
CmaCh11G017330Cucurbita pepo (Zucchini)cmacpeB136
CmaCh11G017330Cucurbita pepo (Zucchini)cmacpeB138
CmaCh11G017330Bottle gourd (USVL1VR-Ls)cmalsiB105
CmaCh11G017330Bottle gourd (USVL1VR-Ls)cmalsiB116
CmaCh11G017330Bottle gourd (USVL1VR-Ls)cmalsiB127
CmaCh11G017330Bottle gourd (USVL1VR-Ls)cmalsiB153
CmaCh11G017330Cucumber (Gy14) v2cgybcmaB158
CmaCh11G017330Cucumber (Gy14) v2cgybcmaB295
CmaCh11G017330Cucumber (Gy14) v2cgybcmaB895
CmaCh11G017330Melon (DHL92) v3.6.1cmamedB106
CmaCh11G017330Melon (DHL92) v3.6.1cmamedB135
CmaCh11G017330Melon (DHL92) v3.6.1cmamedB151
CmaCh11G017330Melon (DHL92) v3.6.1cmamedB152
CmaCh11G017330Melon (DHL92) v3.6.1cmamedB157
CmaCh11G017330Silver-seed gourdcarcmaB0248
CmaCh11G017330Silver-seed gourdcarcmaB0405
CmaCh11G017330Silver-seed gourdcarcmaB0525
CmaCh11G017330Silver-seed gourdcarcmaB1115
CmaCh11G017330Cucumber (Chinese Long) v3cmacucB0128
CmaCh11G017330Cucumber (Chinese Long) v3cmacucB0145
CmaCh11G017330Cucumber (Chinese Long) v3cmacucB0153
CmaCh11G017330Cucumber (Chinese Long) v3cmacucB0166
CmaCh11G017330Cucumber (Chinese Long) v3cmacucB0171
CmaCh11G017330Watermelon (97103) v2cmawmbB091
CmaCh11G017330Watermelon (97103) v2cmawmbB104
CmaCh11G017330Watermelon (97103) v2cmawmbB129
CmaCh11G017330Watermelon (97103) v2cmawmbB148