CmaCh11G017330.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G017330.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ralf-like 19
Location	Cma_Chr11 : 11514860 .. 11515225 (-)
Sequence length	366

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCGTCGTTGCTCCGTTCTCCGTTGCCTTTCATGAAACCTCCTACGATTCATCTCTCGTTGACGATAATTCTAAATATAGCTTCTTTGGTGGAGACTCCTCCGAATCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTTGCCTATAATACTGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTTCCTCCTACTATGATTGCAAGAAGCGGAGAAGGATTAATCCTTATCGTCGCGGTTGTGCTGCTATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of CmaCh11G017330.1 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017330.1 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 1


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESM--TEDSRRQ 60
           M    + +F LL+ A+VA    A    +Y  +    N +      D  ES+  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNA----TYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           L +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]

BLAST of CmaCh11G017330.1 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 1


Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGC 117
           A K++++Y AL KN++PC RRG+SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmaCh11G017330.1 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-10
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1


Query: 31  SSLVDDNSKYSFFGGDSSESMTEDS---RRQLFQYGFAYNTEARKRFLTYYALSKNNIPC 90
           S+ + D     + GG+  E    DS   RR L          A +R+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017330.1 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1


Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  ++++Y AL +N +PC RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmaCh11G017330.1 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-23
Identity = 65/121 (53.72%), Postives = 75/121 (61.98%), Query Frame = 1


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M + K+CLFLLL+  V AP  +A  +        D    Y+        +  EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSD--------DWTRSYADVPDYDFTNSNEDSRRLLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAY     K +L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYKYPKNK-YLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmaCh11G017330.1 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-19
Identity = 62/120 (51.67%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 4   MKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTE--DSRRQLFQ 63
           MK+ L LLL+ A +A   +       D +    N  Y+F+G     ++ +  DSRR LFQ
Sbjct: 1   MKLGLCLLLLVAAIA---ITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQ 60

Query: 64  YGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           YGFAY     K +L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFTD
Sbjct: 61  YGFAYKYPKNK-YLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of CmaCh11G017330.1 vs. TrEMBL
Match: M5X4H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026481mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 1


Query: 5   KICLFLLLV-FAVVAPFSVAFHETSY--------DSSLVDD-NSKYSFFGGDSSESM--T 64
           K+CL +L+V  A+VA  S   HE S+        D SL+D  NSK     G+ +E M  +
Sbjct: 4   KVCLIVLMVVLAMVAQSSAKGHEASWGLSFTAHDDESLIDRANSKVGDMIGEENEMMMDS 63

Query: 65  EDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAA 119
           E SRR L          A+ R++ Y AL +N +PCGRRG SYY+C+ R+R NPY+RGC  
Sbjct: 64  ESSRRTL--------RGAQGRYIAYGALRRNAVPCGRRGQSYYNCQNRQRANPYQRGCTI 121

[Close]

BLAST of CmaCh11G017330.1 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 1


Query: 46  DSSESM--TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRI 105
           D  ES+  +E +RRQL          AR+ +++Y AL KNN+PCGRRG SYYDCKKR+R 
Sbjct: 42  DELESLMDSEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRA 101

Query: 106 NPYRRGCAAITGCARFT 121
           NPYRRGC+ IT C R T
Sbjct: 102 NPYRRGCSVITHCYRQT 109

[Close]

BLAST of CmaCh11G017330.1 vs. TrEMBL
Match: M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-13
Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 1


Query: 46  DSSESM--TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRI 105
           D  ES+  +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR 
Sbjct: 27  DELESLMDSETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRN 86

Query: 106 NPYRRGCAAITGCARFTD 122
           NPYRRGC+AIT C RF +
Sbjct: 87  NPYRRGCSAITHCYRFLE 95

[Close]

BLAST of CmaCh11G017330.1 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-16
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017330.1 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14
Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 1


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESM--TEDSRRQ 60
           M    + +F LL+ A+VA    A    +Y  +    N +      D  ES+  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNA----TYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120
           L +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]

BLAST of CmaCh11G017330.1 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1


Query: 31  SSLVDDNSKYSFFGGDSSESMTEDS---RRQLFQYGFAYNTEARKRFLTYYALSKNNIPC 90
           S+ + D     + GG+  E    DS   RR L          A +R+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017330.1 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 63.9 bits (154), Expect = 7.7e-11
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1


Query: 70  ARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  ++++Y AL +N +PC RRG+SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmaCh11G017330.1 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 1


Query: 11  LLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQYGFAYNTEA 70
           +L   + A  S      S D      +S +S   G  +E + E+   + F    +    A
Sbjct: 13  ILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRRILA 72

Query: 71  RKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 119
           +K++++Y A+ +N++PC RRG+SYY+C++  + NPY RGC+ IT C R
Sbjct: 73  QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017330.1 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 6.3e-23
Identity = 65/121 (53.72%), Postives = 75/121 (61.98%), Query Frame = 1


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M + K+CLFLLL+  V AP  +A  +        D    Y+        +  EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSD--------DWTRSYADVPDYDFTNSNEDSRRLLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAY     K +L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYKYPKNK-YLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmaCh11G017330.1 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-22
Identity = 66/121 (54.55%), Postives = 76/121 (62.81%), Query Frame = 1


Query: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60
           M +MK+ LFLL++  V AP  +AF +   D +       Y F       +  EDSRR LF
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSD---DWTHAYAAPNYDF------TTNNEDSRRLLF 60

Query: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFAY     K +L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAYKYPKNK-YLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFT 111

Query: 121 D 122
           D
Sbjct: 121 D 111

[Close]

BLAST of CmaCh11G017330.1 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-19
Identity = 62/120 (51.67%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 4   MKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTE--DSRRQLFQ 63
           MK+ L LLL+ A +A   +       D +    N  Y+F+G     ++ +  DSRR LFQ
Sbjct: 1   MKLGLCLLLLVAAIA---ITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQ 60

Query: 64  YGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           YGFAY     K +L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFTD
Sbjct: 61  YGFAYKYPKNK-YLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of CmaCh11G017330.1 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-17
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 1


Query: 4   MKICL-FLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLFQY 63
           +K+CL FLLL  AVVA  S +FH+ S+    +   S   F G D+   M  ++ R+    
Sbjct: 3   VKLCLIFLLLALAVVAEAS-SFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAG 62

Query: 64  GFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           G        +++++Y AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  G--------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

[Close]

BLAST of CmaCh11G017330.1 vs. NCBI nr
Match: gi|595883298|ref|XP_007212761.1| (hypothetical protein PRUPE_ppa026481mg [Prunus persica])

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13
Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 1


Query: 5   KICLFLLLV-FAVVAPFSVAFHETSY--------DSSLVDD-NSKYSFFGGDSSESM--T 64
           K+CL +L+V  A+VA  S   HE S+        D SL+D  NSK     G+ +E M  +
Sbjct: 4   KVCLIVLMVVLAMVAQSSAKGHEASWGLSFTAHDDESLIDRANSKVGDMIGEENEMMMDS 63

Query: 65  EDSRRQLFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAA 119
           E SRR L          A+ R++ Y AL +N +PCGRRG SYY+C+ R+R NPY+RGC  
Sbjct: 64  ESSRRTL--------RGAQGRYIAYGALRRNAVPCGRRGQSYYNCQNRQRANPYQRGCTI 121

The following BLAST results are available for this feature:

BLAST of CmaCh11G017330.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF19_ARATH	1.1e-14	56.52	Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1	[more]
RLF4_ARATH	2.6e-13	42.98	Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1	[more]
RALF_TOBAC	2.1e-10	57.45	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF23_ARATH	2.7e-10	40.66	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RLF33_ARATH	1.4e-09	51.02	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]

BLAST of CmaCh11G017330.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU4_CUCSA	4.4e-23	53.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1	[more]
A0A0A0KCD7_CUCSA	2.9e-19	51.67	F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1	[more]
M5X4H7_PRUPE	1.4e-13	44.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026481mg PE=4 SV=1	[more]
R0HVQ3_9BRAS	2.4e-13	55.84	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1	[more]
M4EMR1_BRARP	5.4e-13	55.13	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of CmaCh11G017330.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	6.0e-16	56.52	ralf-like 19	[more]
AT1G28270.1	1.5e-14	42.98	ralf-like 4	[more]
AT3G16570.1	1.5e-11	40.66	rapid alkalinization factor 23	[more]
AT4G15800.1	7.7e-11	51.02	ralf-like 33	[more]
AT3G05490.1	1.3e-10	32.41	ralf-like 22	[more]

BLAST of CmaCh11G017330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461879\|ref\|XP_004148669.1\|	6.3e-23	53.72	PREDICTED: protein RALF-like 19 [Cucumis sativus]	[more]
gi\|659080853\|ref\|XP_008441015.1\|	5.3e-22	54.55	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
gi\|449466199\|ref\|XP_004150814.1\|	4.2e-19	51.67	PREDICTED: protein RALF-like 4 [Cucumis sativus]	[more]
gi\|1009109354\|ref\|XP_015889777.1\|	5.2e-17	45.38	PREDICTED: protein RALF-like 19 [Ziziphus jujuba]	[more]
gi\|595883298\|ref\|XP_007212761.1\|	2.0e-13	44.44	hypothetical protein PRUPE_ppa026481mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G017330	CmaCh11G017330	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G017330.1	CmaCh11G017330.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G017330.1.CDS.1	CmaCh11G017330.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G017330.1.exon.1	CmaCh11G017330.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 61..118 score: 1.1
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 6..120 score: 4.2