Carg26397 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26397
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rapid ALkalinization Factor
Location	Cucurbita_argyrosperma_scaffold_257 : 31289 .. 31654 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACAATGAAGCTCTGCATCTTTCTCCTCCTCGTCTTTGTTGTTGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAATGTTGCATATAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCATCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCTCGCAAGAGGTATTTGAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGCGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

mRNA sequence

ATGGGAACAATGAAGCTCTGCATCTTTCTCCTCCTCGTCTTTGTTGTTGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAATGTTGCATATAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCATCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCTCGCAAGAGGTATTTGAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGCGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

Coding sequence (CDS)

ATGGGAACAATGAAGCTCTGCATCTTTCTCCTCCTCGTCTTTGTTGTTGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAATGTTGCATATAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCATCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCTCGCAAGAGGTATTTGAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGCGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

Protein sequence

MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of Carg26397 vs. NCBI nr
Match: XP_022927737.1 (protein RALF-like 19 [Cucurbita moschata])

HSP 1 Score: 233.0 bits (593), Expect = 5.3e-58
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           MGTMKL IF+LLVFVVAVPLSFALHETSNASSLV+DN AYSFFGGDSSEAMTEDS RQLF
Sbjct: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Carg26397 vs. NCBI nr
Match: XP_022989014.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 113/121 (93.39%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           MGTMKL IFLLLVFVV +PLSFALHETSNASSLVDDN  YSFFGGDSSEAMTEDS RQLF
Sbjct: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF YNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRR INPYRRGCAAITGCARFT
Sbjct: 61  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Carg26397 vs. NCBI nr
Match: XP_023531888.1 (protein RALF-like 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 7.3e-52
Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           MGTMKLCIFLLLVFVV VP SFA HETS++SSL+DD   YSFFGGDSSEAMTED+ RQLF
Sbjct: 15  MGTMKLCIFLLLVFVVVVPFSFAFHETSHSSSLLDDISKYSFFGGDSSEAMTEDTRRQLF 74

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF YN EARKR LSYYAL +NNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 75  QYGFAYNAEARKRVLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 134

Query: 121 D 122
           D
Sbjct: 135 D 135

[Close]

BLAST of Carg26397 vs. NCBI nr
Match: XP_022927736.1 (rapid alkalinization factor 23-like [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 6.9e-50
Identity = 101/121 (83.47%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           M TMK+ + LLLVF    PLSFA HE S++SSL+DDN  YSFFGGDSSEAMTEDS RQLF
Sbjct: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGFVYNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Carg26397 vs. NCBI nr
Match: XP_022989015.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 99/121 (81.82%), Postives = 106/121 (87.60%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           M TMK+C+FLLLVF V  P S A HETS  SSLVDDN  YSFFGGDSSE+MTEDS RQLF
Sbjct: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSSESMTEDSRRQLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF YN EARKR+L+YYAL +NNIPCGRRG+SYYDCKKRRRINPYRRGCAAITGCARFT
Sbjct: 61  QYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCARFT 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Carg26397 vs. TAIR10
Match: AT2G33775.1 (ralf-like 19)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
           AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 59  ARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of Carg26397 vs. TAIR10
Match: AT1G28270.1 (ralf-like 4)

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-16
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 72  KRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 61  RRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of Carg26397 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 29  NASSLVDDNVAYSFFGGDSSEAMTEDS--HRQLFQYGFVYNKEARKRYLSYYALRQNNIP 88
           + S+ + D     + GG+  E    DS  +R++          A +RY+SY ALR+N IP
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL---------ATRRYISYGALRRNTIP 114

Query: 89  CGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           C RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 115 CSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of Carg26397 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A+K+Y+SY A+R+N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 71  AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of Carg26397 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 67.8 bits (164), Expect = 5.3e-12
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Carg26397 vs. Swiss-Prot
Match: sp|Q6NME6|RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-15
Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
           AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 59  ARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of Carg26397 vs. Swiss-Prot
Match: sp|Q9FZA0|RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-15
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 72  KRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 61  RRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of Carg26397 vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 29  NASSLVDDNVAYSFFGGDSSEAMTEDS--HRQLFQYGFVYNKEARKRYLSYYALRQNNIP 88
           + S+ + D     + GG+  E    DS  +R++          A +RY+SY ALR+N IP
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL---------ATRRYISYGALRRNTIP 114

Query: 89  CGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           C RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 115 CSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of Carg26397 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.6e-11
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A+K+Y+SY A+R+N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 71  AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of Carg26397 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC 117
           A K+Y+SY AL++N++PC RRG SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]

BLAST of Carg26397 vs. TrEMBL
Match: tr|A0A0A0KHU4|A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 69/121 (57.02%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           M + KLC+FLLL+ VVA PL  AL +    S    D   Y F   +      EDS R LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRS--YADVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + +YL Y ALR+NNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of Carg26397 vs. TrEMBL
Match: tr|A0A1S3B2H7|A0A1S3B2H7_CUCME (protein RALF-like 19 OS=Cucumis melo OX=3656 GN=LOC103485256 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-22
Identity = 67/121 (55.37%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 1   MGTMKLCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAMTEDSHRQLF 60
           M +MKL +FLL++ VVA PL  A  +        D   AY+    D +    EDS R LF
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSD--------DWTHAYAAPNYDFT-TNNEDSRRLLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + +YL Y ALR+NN PC  RG SYYDCKKRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFT 111

Query: 121 D 122
           D
Sbjct: 121 D 111

[Close]

BLAST of Carg26397 vs. TrEMBL
Match: tr|A0A1S4E1Z3|A0A1S4E1Z3_CUCME (protein RALF-like 4 OS=Cucumis melo OX=3656 GN=LOC107991607 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 66/121 (54.55%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 4   MKLCI-FLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAM--TEDSHRQLF 63
           MKLC+  LLLV   A  L  AL + + A      N  Y+F+G  +   +   +DS R LF
Sbjct: 1   MKLCLCLLLLVAAFAATLPVALCDWTRAFG----NPEYAFWGNSAPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + +YL Y ALR+NN PC RRG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRRRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of Carg26397 vs. TrEMBL
Match: tr|A0A0A0KCD7|A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus OX=3659 GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-20
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 6   LCIFLLLVFVVAVPLSFALHETSNASSLVDDNVAYSFFGGDSSEAM--TEDSHRQLFQYG 65
           LC+ LLLV  +A+ L  AL + + A      N  Y+F+G      +   +DS R LFQYG
Sbjct: 5   LCL-LLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLFQYG 64

Query: 66  FVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 122
           F Y K  + +YL Y ALR+NN PC  RG SYYDC KRR+ NPYRRGC AITGCARFTD
Sbjct: 65  FAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFTD 116

[Close]

BLAST of Carg26397 vs. TrEMBL
Match: tr|A0A2N9EP31|A0A2N9EP31_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4211 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-14
Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 8   IFLLLVFVVAVPLSFALHE----------TSNASSLVDDNVAYSFFGGDSSEAMTEDSHR 67
           IFLLL F + V  S ++HE          T +    V D +      G+ +E + +  H 
Sbjct: 8   IFLLLAFAMVVESSSSIHEATKWGLTKIGTGSCDGAVGDCI------GEENEMLMDSHHS 67

Query: 68  QLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCA 122
           +            R++Y+SY ALR N+IPCGRRG SYY+C++R+R NPYRRGC  IT CA
Sbjct: 68  R--------RLARRRKYISYGALRANSIPCGRRGNSYYNCQRRQRANPYRRGCNIITHCA 117

The following BLAST results are available for this feature:

BLAST of Carg26397 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927737.1	5.3e-58	95.87	protein RALF-like 19 [Cucurbita moschata]	[more]
XP_022989014.1	3.8e-56	93.39	protein RALF-like 4 [Cucurbita maxima]	[more]
XP_023531888.1	7.3e-52	86.78	protein RALF-like 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022927736.1	6.9e-50	83.47	rapid alkalinization factor 23-like [Cucurbita moschata]	[more]
XP_022989015.1	4.5e-49	81.82	protein RALF-like 4 [Cucurbita maxima]	[more]

BLAST of Carg26397 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	1.2e-16	70.59	ralf-like 19	[more]
AT1G28270.1	4.6e-16	70.83	ralf-like 4	[more]
AT3G16570.1	1.4e-12	41.30	rapid alkalinization factor 23	[more]
AT3G05490.1	3.1e-12	55.10	ralf-like 22	[more]
AT4G15800.1	5.3e-12	57.14	ralf-like 33	[more]

BLAST of Carg26397 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NME6\|RLF19_ARATH	2.2e-15	70.59	Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1	[more]
sp\|Q9FZA0\|RLF4_ARATH	8.4e-15	70.83	Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1	[more]
sp\|Q9LUS7\|RLF23_ARATH	2.5e-11	41.30	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
sp\|Q9MA62\|RLF22_ARATH	5.6e-11	55.10	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
sp\|Q945T0\|RALF_TOBAC	9.6e-11	59.57	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]

BLAST of Carg26397 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHU4\|A0A0A0KHU4_CUCSA	1.9e-24	57.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484570 PE=4 SV=1	[more]
tr\|A0A1S3B2H7\|A0A1S3B2H7_CUCME	3.1e-22	55.37	protein RALF-like 19 OS=Cucumis melo OX=3656 GN=LOC103485256 PE=4 SV=1	[more]
tr\|A0A1S4E1Z3\|A0A1S4E1Z3_CUCME	1.2e-21	54.55	protein RALF-like 4 OS=Cucumis melo OX=3656 GN=LOC107991607 PE=4 SV=1	[more]
tr\|A0A0A0KCD7\|A0A0A0KCD7_CUCSA	3.8e-20	53.39	F3H9.8 protein OS=Cucumis sativus OX=3659 GN=Csa_6G199790 PE=4 SV=1	[more]
tr\|A0A2N9EP31\|A0A2N9EP31_FAGSY	3.1e-14	41.13	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4211 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26397-RA	Carg26397-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 50..118 e-value: 3.2E-20 score: 72.6
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 1..120
None	No IPR available	PANTHER	PTHR33136:SF16	PROTEIN RALF-LIKE 19-RELATED	coord: 1..120

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26397	CmaCh11G017330	Cucurbita maxima (Rimu)	carcmaB1113
Carg26397	CmoCh11G013800	Cucurbita moschata (Rifu)	carcmoB1085
Carg26397	Cp4.1LG04g07980	Cucurbita pepo (Zucchini)	carcpeB1126

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None