CmoCh08G008300 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGGATTTTTATACACCGACTCCACATCTTTTTGTTTATATTTAAAGTCTGTTTGTGGTTGCTTGCTGGGTCGCATCTTGATTTCATCTTAGAAGCATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGCTTTCAACATTCGTATGTCTCTGCTTTTCTTTCTTCCATTTTCCATGCAATATCAATCAATTAATTTTGAGTGTTTTGCTTCAAAATCTGGCAGCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCGGTGAGAGAATCAAGCAGCACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGAAAAAGAGGGCGGTGAATGGGGTTCCTTTAATTTTCTCAAATCTTAAATATTATTATATAGACATCGTATATATATAATATATATATATATATATATATCTATATAGTTTATAATATAGGTTGCTTTTGAGTGTGCGTGGGTTTATATGCAGCAGACCACATGAGTTTTGCTTCCTCTTTGTCATCGGTATATTATATACGCATATATTGTCTTATTTAAGTTTTTCTTTTTTGAGTTCTTCCCAAAATTTTAAAACAGGTCGGCTAGAATATTTCGTTTATATTGTGTTATTTGAACTTTTCTTTTCTGGGTTTTTCCCAAAATTTTAAAAC AAACGGATTTTTATACACCGACTCCACATCTTTTTGTTTATATTTAAAGTCTGTTTGTGGTTGCTTGCTGGGTCGCATCTTGATTTCATCTTAGAAGCATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGCTTTCAACATTCCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCGGTGAGAGAATCAAGCAGCACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGAAAAAGAGGGCGGTGAATGGGGTTCCTTTAATTTTCTCAAATCTTAAATATTATTATATAGACATCGTATATATATAATATATATATATATATATATATCTATATAGTTTATAATATAGGTTGCTTTTGAGTGTGCGTGGGTTTATATGCAGCAGACCACATGAGTTTTGCTTCCTCTTTGTCATCGGTATATTATATACGCATATATTGTCTTATTTAAGTTTTTCTTTTTTGAGTTCTTCCCAAAATTTTAAAACAGGTCGGCTAGAATATTTCGTTTATATTGTGTTATTTGAACTTTTCTTTTCTGGGTTTTTCCCAAAATTTTAAAAC ATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGCTTTCAACATTCCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCGGTGAGAGAATCAAGCAGCACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGA
BLAST of CmoCh08G008300 vs. TrEMBL
Match: A0A0A0KFQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108590 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 6.6e-43 Identity = 90/137 (65.69%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of CmoCh08G008300 vs. TrEMBL
Match: W9QSM3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021784 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 4.5e-36 Identity = 82/137 (59.85%), Postives = 96/137 (70.07%), Query Frame = 1
BLAST of CmoCh08G008300 vs. TrEMBL
Match: A0A067H1B5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033128mg PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 8.6e-35 Identity = 77/130 (59.23%), Postives = 93/130 (71.54%), Query Frame = 1
BLAST of CmoCh08G008300 vs. TrEMBL
Match: V4TE16_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022623mg PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 8.6e-35 Identity = 77/130 (59.23%), Postives = 93/130 (71.54%), Query Frame = 1
BLAST of CmoCh08G008300 vs. TrEMBL
Match: A0A0D2PI63_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G175800 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 8.6e-35 Identity = 77/131 (58.78%), Postives = 89/131 (67.94%), Query Frame = 1
BLAST of CmoCh08G008300 vs. TAIR10
Match: AT1G02070.1 (AT1G02070.1 unknown protein) HSP 1 Score: 132.1 bits (331), Expect = 2.3e-31 Identity = 69/132 (52.27%), Postives = 80/132 (60.61%), Query Frame = 1
BLAST of CmoCh08G008300 vs. TAIR10
Match: AT3G60520.1 (AT3G60520.1 unknown protein) HSP 1 Score: 127.5 bits (319), Expect = 5.7e-30 Identity = 73/135 (54.07%), Postives = 90/135 (66.67%), Query Frame = 1
BLAST of CmoCh08G008300 vs. NCBI nr
Match: gi|659134040|ref|XP_008467003.1| (PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]) HSP 1 Score: 182.6 bits (462), Expect = 4.2e-43 Identity = 92/138 (66.67%), Postives = 105/138 (76.09%), Query Frame = 1
BLAST of CmoCh08G008300 vs. NCBI nr
Match: gi|449445461|ref|XP_004140491.1| (PREDICTED: uncharacterized protein LOC101205257 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 9.4e-43 Identity = 90/137 (65.69%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of CmoCh08G008300 vs. NCBI nr
Match: gi|747044635|ref|XP_011090075.1| (PREDICTED: uncharacterized protein LOC105170847 [Sesamum indicum]) HSP 1 Score: 162.9 bits (411), Expect = 3.5e-37 Identity = 82/135 (60.74%), Postives = 93/135 (68.89%), Query Frame = 1
BLAST of CmoCh08G008300 vs. NCBI nr
Match: gi|703072320|ref|XP_010089254.1| (hypothetical protein L484_021784 [Morus notabilis]) HSP 1 Score: 158.7 bits (400), Expect = 6.5e-36 Identity = 82/137 (59.85%), Postives = 96/137 (70.07%), Query Frame = 1
BLAST of CmoCh08G008300 vs. NCBI nr
Match: gi|641866960|gb|KDO85644.1| (hypothetical protein CISIN_1g033128mg [Citrus sinensis]) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34 Identity = 77/130 (59.23%), Postives = 93/130 (71.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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