CmaCh12G012440 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAGCCGATTCCCCGGAGCCATATCTCAAGATTGGGAGCCTGTAGTGCTCCACAAGTCCAAGCCAAAGGCGCAGGACCTTCGCGATCCAAAGGCCGTGAACCAAGCGATTCGATCCGGCGCGCCCGTCCTGACCGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCACGGCAGCGCCGGTGAACGCGAGAAAGCTCGAGGAAGGAACCGAGCCAGCGGCGCTCGACCGGGTACCGACGGAGGTGAGGCATGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAAGCTGAACTTGCGAAGCAGATTAACGAGCGGACTCAGGTGGTGCAGGAGTATGAGAATGGAAAGGCTGTGCCGAATCAGGCCGTTTTGGCTAAGATGGAGAAGGTCTTGGGCGTCAAGCTTCGAGGCAAATCTGGCAAGTGA ATGCCGAGCCGATTCCCCGGAGCCATATCTCAAGATTGGGAGCCTGTAGTGCTCCACAAGTCCAAGCCAAAGGCGCAGGACCTTCGCGATCCAAAGGCCGTGAACCAAGCGATTCGATCCGGCGCGCCCGTCCTGACCGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCACGGCAGCGCCGGTGAACGCGAGAAAGCTCGAGGAAGGAACCGAGCCAGCGGCGCTCGACCGGGTACCGACGGAGGTGAGGCATGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAAGCTGAACTTGCGAAGCAGATTAACGAGCGGACTCAGGTGGTGCAGGAGTATGAGAATGGAAAGGCTGTGCCGAATCAGGCCGTTTTGGCTAAGATGGAGAAGGTCTTGGGCGTCAAGCTTCGAGGCAAATCTGGCAAGTGA ATGCCGAGCCGATTCCCCGGAGCCATATCTCAAGATTGGGAGCCTGTAGTGCTCCACAAGTCCAAGCCAAAGGCGCAGGACCTTCGCGATCCAAAGGCCGTGAACCAAGCGATTCGATCCGGCGCGCCCGTCCTGACCGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCACGGCAGCGCCGGTGAACGCGAGAAAGCTCGAGGAAGGAACCGAGCCAGCGGCGCTCGACCGGGTACCGACGGAGGTGAGGCATGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAAGCTGAACTTGCGAAGCAGATTAACGAGCGGACTCAGGTGGTGCAGGAGTATGAGAATGGAAAGGCTGTGCCGAATCAGGCCGTTTTGGCTAAGATGGAGAAGGTCTTGGGCGTCAAGCTTCGAGGCAAATCTGGCAAGTGA MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATAAPVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGKSGK
BLAST of CmaCh12G012440 vs. Swiss-Prot
Match: MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-57 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 1
BLAST of CmaCh12G012440 vs. Swiss-Prot
Match: MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 8.6e-35 Identity = 78/137 (56.93%), Postives = 105/137 (76.64%), Query Frame = 1
BLAST of CmaCh12G012440 vs. Swiss-Prot
Match: MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32 Identity = 73/137 (53.28%), Postives = 103/137 (75.18%), Query Frame = 1
BLAST of CmaCh12G012440 vs. Swiss-Prot
Match: EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.2e-21 Identity = 62/132 (46.97%), Postives = 82/132 (62.12%), Query Frame = 1
BLAST of CmaCh12G012440 vs. Swiss-Prot
Match: EDF1_CHICK (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus GN=EDF1 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-19 Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TrEMBL
Match: A0A0A0LFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004720 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 5.5e-65 Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TrEMBL
Match: A0A0D2SNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G069500 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.0e-59 Identity = 122/145 (84.14%), Postives = 134/145 (92.41%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TrEMBL
Match: S4SF23_GOSHI (Multiprotein bridging factor 1 transcriptional coactivator OS=Gossypium hirsutum GN=MBF1c PE=2 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 4.5e-59 Identity = 122/145 (84.14%), Postives = 133/145 (91.72%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TrEMBL
Match: A0A0S3TCP5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G243400 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 5.9e-59 Identity = 124/145 (85.52%), Postives = 133/145 (91.72%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TrEMBL
Match: V7C691_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G162100g PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 7.8e-59 Identity = 123/145 (84.83%), Postives = 135/145 (93.10%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TAIR10
Match: AT3G24500.1 (AT3G24500.1 multiprotein bridging factor 1C) HSP 1 Score: 223.8 bits (569), Expect = 6.9e-59 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TAIR10
Match: AT3G58680.1 (AT3G58680.1 multiprotein bridging factor 1B) HSP 1 Score: 147.9 bits (372), Expect = 4.8e-36 Identity = 78/137 (56.93%), Postives = 105/137 (76.64%), Query Frame = 1
BLAST of CmaCh12G012440 vs. TAIR10
Match: AT2G42680.1 (AT2G42680.1 multiprotein bridging factor 1A) HSP 1 Score: 140.2 bits (352), Expect = 1.0e-33 Identity = 73/137 (53.28%), Postives = 103/137 (75.18%), Query Frame = 1
BLAST of CmaCh12G012440 vs. NCBI nr
Match: gi|449443143|ref|XP_004139340.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus]) HSP 1 Score: 255.0 bits (650), Expect = 8.0e-65 Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 1
BLAST of CmaCh12G012440 vs. NCBI nr
Match: gi|659071135|ref|XP_008458302.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]) HSP 1 Score: 250.0 bits (637), Expect = 2.6e-63 Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 1
BLAST of CmaCh12G012440 vs. NCBI nr
Match: gi|1009160474|ref|XP_015898370.1| (PREDICTED: multiprotein-bridging factor 1c [Ziziphus jujuba]) HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59 Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 1
BLAST of CmaCh12G012440 vs. NCBI nr
Match: gi|823237796|ref|XP_012451544.1| (PREDICTED: multiprotein-bridging factor 1c [Gossypium raimondii]) HSP 1 Score: 236.5 bits (602), Expect = 2.9e-59 Identity = 122/145 (84.14%), Postives = 134/145 (92.41%), Query Frame = 1
BLAST of CmaCh12G012440 vs. NCBI nr
Match: gi|763797923|gb|KJB64878.1| (hypothetical protein B456_010G069500 [Gossypium raimondii]) HSP 1 Score: 236.5 bits (602), Expect = 2.9e-59 Identity = 122/145 (84.14%), Postives = 134/145 (92.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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