CsGy2G001220 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G001220
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionmultiprotein-bridging factor 1c
LocationChr2 : 788087 .. 788698 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAAGAACGTTCGAGAAACAAACGGGCAGTCGAAAGCGGGCAAGAACTTTCCAGAGAAACAATCCTCCTTCTCTCTATATATAATCCATTGCAATCAACGTTGAAATCAAATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAACTTCGAGGAAGATCGGGGAAATGA

mRNA sequence

ATGTCTCAAGAACGTTCGAGAAACAAACGGGCAGTCGAAAGCGGGCAAGAACTTTCCAGAGAAACAATCCTCCTTCTCTCTATATATAATCCATTGCAATCAACGTTGAAATCAAATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAACTTCGAGGAAGATCGGGGAAATGA

Coding sequence (CDS)

ATGTCTCAAGAACGTTCGAGAAACAAACGGGCAGTCGAAAGCGGGCAAGAACTTTCCAGAGAAACAATCCTCCTTCTCTCTATATATAATCCATTGCAATCAACGTTGAAATCAAATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAACTTCGAGGAAGATCGGGGAAATGA

Protein sequence

MSQERSRNKRAVESGQELSRETILLLSIYNPLQSTLKSNHKFRILFVFFFSILKFSTTMPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
Homology
[Close]
BLAST of CsGy2G001220 vs. NCBI nr
Match: XP_008458302.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 1.5e-73
Identity = 157/196 (80.10%), Postives = 167/196 (85.20%), Query Frame = 0 

Query: 13  ESGQELSRETILLLSIYNP-----LQSTLKSNHKFRILFVFFFSILKFSTTMPSRFPGAL 72
           ++G+    +  L LSIYNP     +   +++         F  SILKFSTTMPSRFPGAL
Sbjct: 17  QAGKNFPEKQSLFLSIYNPSPRSSIAINVETKSSISNCLDFSLSILKFSTTMPSRFPGAL 76

Query: 73  SQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLE 132
           SQDWEPVVLHKAKPKAQ LRDPKAVNQAIRSGAPVQTVKKFDAGLNKKV AAPVNARKL+
Sbjct: 77  SQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAAAPVNARKLD 136

Query: 133 EGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLA 192
           EGTEPAALDRV VEVRQAIQKAR+EKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLA
Sbjct: 137 EGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLA 196

Query: 193 KMEKVLGVKLRGRSGK 204
           KMEKVLGVKLRGRSGK
Sbjct: 197 KMEKVLGVKLRGRSGK 212

[Close]
BLAST of CsGy2G001220 vs. NCBI nr
Match: XP_004139340.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical protein Csa_2G004720 [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 118
           MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 119 APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 178
           APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 179 AVPNQAVLAKMEKVLGVKLRGRSGK 204
           AVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]
BLAST of CsGy2G001220 vs. NCBI nr
Match: XP_022965996.1 (multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-bridging factor 1c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 118
           MPSRFPGA+SQDWEPVVLHK+KPKAQ LRDPKAVNQAIRSGAPV TVKKFDAG NKK TA
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 119 APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 178
           APVNARKLEEGTEPAALDRV  EVR AIQKARLEKKMSQAELAKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 179 AVPNQAVLAKMEKVLGVKLRGRSGK 204
           AVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]
BLAST of CsGy2G001220 vs. NCBI nr
Match: XP_022937454.1 (multiprotein-bridging factor 1c [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 8.2e-64
Identity = 134/145 (92.41%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 118
           MPSRFPGA+SQDWEPVVLHK+KPKAQ LRDPKAVNQAIRSGAPV TVKKFDAG NKK TA
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 119 APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 178
           APVNARKLEEGTEPAALDRV  EVR AIQKARLEKKMSQAEL KQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 179 AVPNQAVLAKMEKVLGVKLRGRSGK 204
           AVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]
BLAST of CsGy2G001220 vs. NCBI nr
Match: PON73318.1 (Transcription regulator, DNA-binding [Parasponia andersonii])

HSP 1 Score: 233.8 bits (595), Expect = 5.2e-58
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKK--- 118
           MPSR+PGA++QDWEPVVLH++KPKAQ LRDPKAVNQA+RSGA VQTVKKFDAG NKK   
Sbjct: 1   MPSRYPGAITQDWEPVVLHRSKPKAQDLRDPKAVNQALRSGAAVQTVKKFDAGSNKKSSS 60

Query: 119 -VTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEY 178
             +A  VNARKL+EGTEPAALDRVA EVRQAIQKARLEKKMSQAELAKQINER QVVQEY
Sbjct: 61  SASATVVNARKLDEGTEPAALDRVAPEVRQAIQKARLEKKMSQAELAKQINERPQVVQEY 120

Query: 179 ENGKAVPNQAVLAKMEKVLGVKLRGRSGK 204
           ENGKAVPNQAVLAKME+VLGVKLRG+ GK
Sbjct: 121 ENGKAVPNQAVLAKMERVLGVKLRGKVGK 149

[Close]
BLAST of CsGy2G001220 vs. TAIR10
Match: AT3G24500.1 (multiprotein bridging factor 1C)

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-56
Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNK--KV 118
           MPSR+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R+G  VQTVKKFDAG NK  K 
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 119 TAAPV-NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYE 178
           TA PV N +KLEE TEPAA+DRV  EVR  IQKARLEKKMSQA+LAKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 179 NGKAVPNQAVLAKMEKVLGVKLRGRSGK 204
           NGKAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]
BLAST of CsGy2G001220 vs. TAIR10
Match: AT3G58680.1 (multiprotein bridging factor 1B)

HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34
Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = 0 

Query: 65  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA-APVNA 124
           G ++QDWEPVV+ K  P A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 125 RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 184
           +KL++ TE  + DRV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 185 AVLAKMEKVLGVKLRGR 201
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of CsGy2G001220 vs. TAIR10
Match: AT2G42680.1 (multiprotein bridging factor 1A)

HSP 1 Score: 134.8 bits (338), Expect = 5.9e-32
Identity = 69/137 (50.36%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 65  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA-APVNA 124
           G ++QDWEPVV+ K    A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 125 RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 184
           + L++ TE    +RV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 185 AVLAKMEKVLGVKLRGR 201
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of CsGy2G001220 vs. Swiss-Prot
Match: sp|Q9LV58|MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-55
Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNK--KV 118
           MPSR+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R+G  VQTVKKFDAG NK  K 
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 119 TAAPV-NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYE 178
           TA PV N +KLEE TEPAA+DRV  EVR  IQKARLEKKMSQA+LAKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 179 NGKAVPNQAVLAKMEKVLGVKLRGRSGK 204
           NGKAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]
BLAST of CsGy2G001220 vs. Swiss-Prot
Match: sp|Q9LXT3|MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = 0 

Query: 65  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA-APVNA 124
           G ++QDWEPVV+ K  P A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 125 RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 184
           +KL++ TE  + DRV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 185 AVLAKMEKVLGVKLRGR 201
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of CsGy2G001220 vs. Swiss-Prot
Match: sp|Q9SJI8|MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 69/137 (50.36%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 65  GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA-APVNA 124
           G ++QDWEPVV+ K    A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 125 RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 184
           + L++ TE    +RV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 185 AVLAKMEKVLGVKLRGR 201
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of CsGy2G001220 vs. Swiss-Prot
Match: sp|Q6GPQ6|EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0 

Query: 70  DWEPV-VLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEE 129
           DW+ V VL K  P A   +  +A+  A R G  V+T KK+ AG NK+ T    N  KL+ 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR-NTAKLDR 64

Query: 130 GTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAK 189
            TE    DRV +EV + IQ+ R  K M+Q +LA +INE+ QV+ +YE GKA+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGK 124

Query: 190 MEKVLGVKLRGR 201
           +E+V+G+KLRG+
Sbjct: 125 IERVIGLKLRGK 135

[Close]
BLAST of CsGy2G001220 vs. Swiss-Prot
Match: sp|Q9JMG1|EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 57/132 (43.18%), Postives = 84/132 (63.64%), Query Frame = 0 

Query: 70  DWEPV-VLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEE 129
           DW+ V VL K  P A   +  +A+  A R G  V+T KK+ AG NK+ +    N  KL+ 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK-NTAKLDR 64

Query: 130 GTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAK 189
            TE    DRV +EV + IQ+ R  K ++Q +LA +INE+ QV+ +YE+G+A+PN  VL K
Sbjct: 65  ETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGK 124

Query: 190 MEKVLGVKLRGR 201
           +E+ +G+KLRG+
Sbjct: 125 IERAIGLKLRGK 135

[Close]
BLAST of CsGy2G001220 vs. TrEMBL
Match: tr|A0A1S3C8T1|A0A1S3C8T1_CUCME (multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 9.9e-74
Identity = 157/196 (80.10%), Postives = 167/196 (85.20%), Query Frame = 0 

Query: 13  ESGQELSRETILLLSIYNP-----LQSTLKSNHKFRILFVFFFSILKFSTTMPSRFPGAL 72
           ++G+    +  L LSIYNP     +   +++         F  SILKFSTTMPSRFPGAL
Sbjct: 17  QAGKNFPEKQSLFLSIYNPSPRSSIAINVETKSSISNCLDFSLSILKFSTTMPSRFPGAL 76

Query: 73  SQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLE 132
           SQDWEPVVLHKAKPKAQ LRDPKAVNQAIRSGAPVQTVKKFDAGLNKKV AAPVNARKL+
Sbjct: 77  SQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAAAPVNARKLD 136

Query: 133 EGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLA 192
           EGTEPAALDRV VEVRQAIQKAR+EKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLA
Sbjct: 137 EGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLA 196

Query: 193 KMEKVLGVKLRGRSGK 204
           KMEKVLGVKLRGRSGK
Sbjct: 197 KMEKVLGVKLRGRSGK 212

[Close]
BLAST of CsGy2G001220 vs. TrEMBL
Match: tr|A0A0A0LFV9|A0A0A0LFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004720 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.1e-69
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 118
           MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 119 APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 178
           APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 179 AVPNQAVLAKMEKVLGVKLRGRSGK 204
           AVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]
BLAST of CsGy2G001220 vs. TrEMBL
Match: tr|A0A2P5DJ54|A0A2P5DJ54_PARAD (Transcription regulator, DNA-binding OS=Parasponia andersonii OX=3476 GN=PanWU01x14_058220 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.4e-58
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKK--- 118
           MPSR+PGA++QDWEPVVLH++KPKAQ LRDPKAVNQA+RSGA VQTVKKFDAG NKK   
Sbjct: 1   MPSRYPGAITQDWEPVVLHRSKPKAQDLRDPKAVNQALRSGAAVQTVKKFDAGSNKKSSS 60

Query: 119 -VTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEY 178
             +A  VNARKL+EGTEPAALDRVA EVRQAIQKARLEKKMSQAELAKQINER QVVQEY
Sbjct: 61  SASATVVNARKLDEGTEPAALDRVAPEVRQAIQKARLEKKMSQAELAKQINERPQVVQEY 120

Query: 179 ENGKAVPNQAVLAKMEKVLGVKLRGRSGK 204
           ENGKAVPNQAVLAKME+VLGVKLRG+ GK
Sbjct: 121 ENGKAVPNQAVLAKMERVLGVKLRGKVGK 149

[Close]
BLAST of CsGy2G001220 vs. TrEMBL
Match: tr|A0A2P5F9R4|A0A2P5F9R4_9ROSA (Transcription regulator, DNA-binding OS=Trema orientalis OX=63057 GN=TorRG33x02_095650 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.6e-58
Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0 

Query: 59  MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKK--V 118
           MPSR+PGA++QDWEPVVLHK+KPKAQ LR+PKAVNQA+RSGA VQTVKKFDAG NKK   
Sbjct: 1   MPSRYPGAITQDWEPVVLHKSKPKAQDLREPKAVNQALRSGAAVQTVKKFDAGSNKKSSA 60

Query: 119 TAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYEN 178
           +A  VNARKL+EGTEP ALDRVA EVRQAIQKARLEKKMSQAELAKQINER QVVQEYEN
Sbjct: 61  SATVVNARKLDEGTEPTALDRVAPEVRQAIQKARLEKKMSQAELAKQINERPQVVQEYEN 120

Query: 179 GKAVPNQAVLAKMEKVLGVKLRGRSGK 204
           GKAVPNQAVLAKME+VLGVKLRG+ GK
Sbjct: 121 GKAVPNQAVLAKMERVLGVKLRGKVGK 147

[Close]
BLAST of CsGy2G001220 vs. TrEMBL
Match: tr|A0A0D2SNV8|A0A0D2SNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G069500 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0 

Query: 51  SILKFSTTMPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDA 110
           S L  S+TMP+RF GA++QDWEPVVLHK+KPKAQ LRDPKAVN+A+RSGAPVQT+KKFDA
Sbjct: 12  SHLHSSSTMPTRFGGAVTQDWEPVVLHKSKPKAQDLRDPKAVNRALRSGAPVQTIKKFDA 71

Query: 111 GLNKKVTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQV 170
           G NKK     VNARKL+EGTEPAALDRV  +VRQ IQKARLEKK+SQAELAK INE+ +V
Sbjct: 72  GSNKKTAGPVVNARKLDEGTEPAALDRVPTDVRQTIQKARLEKKLSQAELAKLINEQLKV 131

Query: 171 VQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK 204
           VQEYENGKAVPNQAVLAKME+VLGVKLRG+SGK
Sbjct: 132 VQEYENGKAVPNQAVLAKMERVLGVKLRGKSGK 164

The following BLAST results are available for this feature:
BLAST of CsGy2G001220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458302.11.5e-7380.10PREDICTED: multiprotein-bridging factor 1c [Cucumis melo][more]
XP_004139340.11.7e-69100.00PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothe... [more]
XP_022965996.12.8e-6493.10multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-... [more]
XP_022937454.18.2e-6492.41multiprotein-bridging factor 1c [Cucurbita moschata][more]
PON73318.15.2e-5884.56Transcription regulator, DNA-binding [Parasponia andersonii][more]
BLAST of CsGy2G001220 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24500.11.2e-5680.41multiprotein bridging factor 1C[more]
AT3G58680.16.3e-3453.28multiprotein bridging factor 1B[more]
AT2G42680.15.9e-3250.36multiprotein bridging factor 1A[more]
BLAST of CsGy2G001220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LV58|MBF1C_ARATH2.1e-5580.41Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV... [more]
sp|Q9LXT3|MBF1B_ARATH1.1e-3253.28Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV... [more]
sp|Q9SJI8|MBF1A_ARATH1.1e-3050.36Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV... [more]
sp|Q6GPQ6|EDF1_XENLA1.4e-1945.45Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G... [more]
sp|Q9JMG1|EDF1_MOUSE1.2e-1843.18Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE... [more]
BLAST of CsGy2G001220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8T1|A0A1S3C8T1_CUCME9.9e-7480.10multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=... [more]
tr|A0A0A0LFV9|A0A0A0LFV9_CUCSA1.1e-69100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004720 PE=4 SV=1[more]
tr|A0A2P5DJ54|A0A2P5DJ54_PARAD3.4e-5884.56Transcription regulator, DNA-binding OS=Parasponia andersonii OX=3476 GN=PanWU01... [more]
tr|A0A2P5F9R4|A0A2P5F9R4_9ROSA7.6e-5885.03Transcription regulator, DNA-binding OS=Trema orientalis OX=63057 GN=TorRG33x02_... [more]
tr|A0A0D2SNV8|A0A0D2SNV8_GOSRA1.3e-5779.74Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G069500 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR010982Lambda_DNA-bd_dom_sf
IPR013729MBF1_N
IPR001387Cro/C1-type_HTH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G001220.1CsGy2G001220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..168
NoneNo IPR availableGENE3DG3DSA:1.10.260.40coord: 129..203
e-value: 1.2E-28
score: 100.3
NoneNo IPR availablePANTHERPTHR10245:SF71SUBFAMILY NOT NAMEDcoord: 80..201
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 80..201
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 145..200
e-value: 2.0E-13
score: 60.6
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 146..197
e-value: 1.6E-13
score: 50.4
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 146..200
score: 13.923
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 144..197
e-value: 4.97538E-11
score: 54.4814
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 69..138
e-value: 6.4E-20
score: 71.3
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILYSSF47413lambda repressor-like DNA-binding domainscoord: 141..197

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G001220Cla016761Watermelon (97103) v1cgybwmB154
CsGy2G001220Csa2G004720Cucumber (Chinese Long) v2cgybcuB056
CsGy2G001220MELO3C004553Melon (DHL92) v3.5.1cgybmeB121
CsGy2G001220ClCG11G002510Watermelon (Charleston Gray)cgybwcgB094
CsGy2G001220CSPI02G01220Wild cucumber (PI 183967)cgybcpiB056
CsGy2G001220CmaCh12G012440Cucurbita maxima (Rimu)cgybcmaB178
CsGy2G001220CmoCh12G012750Cucurbita moschata (Rifu)cgybcmoB170
CsGy2G001220Lsi11G002660Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G001220Cp4.1LG07g09940Cucurbita pepo (Zucchini)cgybcpeB272
CsGy2G001220MELO3C004553.2Melon (DHL92) v3.6.1cgybmedB119
CsGy2G001220CsaV3_2G002310Cucumber (Chinese Long) v3cgybcucB064
CsGy2G001220Cla97C11G208930Watermelon (97103) v2cgybwmbB098
CsGy2G001220Bhi06G001730Wax gourdcgybwgoB127
CsGy2G001220Carg25993Silver-seed gourdcarcgybB0292
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G001220Wax gourdcgybwgoB205
CsGy2G001220Cucurbita pepo (Zucchini)cgybcpeB168
CsGy2G001220Cucurbita maxima (Rimu)cgybcmaB154
CsGy2G001220Cucurbita maxima (Rimu)cgybcmaB163
CsGy2G001220Cucurbita maxima (Rimu)cgybcmaB257
CsGy2G001220Cucurbita moschata (Rifu)cgybcmoB146
CsGy2G001220Cucurbita moschata (Rifu)cgybcmoB155
CsGy2G001220Cucurbita moschata (Rifu)cgybcmoB243
CsGy2G001220Cucurbita pepo (Zucchini)cgybcpeB204
CsGy2G001220Cucurbita pepo (Zucchini)cgybcpeB232
CsGy2G001220Bottle gourd (USVL1VR-Ls)cgyblsiB120
CsGy2G001220Melon (DHL92) v3.5.1cgybmeB095
CsGy2G001220Melon (DHL92) v3.6.1cgybmedB096
CsGy2G001220Silver-seed gourdcarcgybB0041
CsGy2G001220Silver-seed gourdcarcgybB0137
CsGy2G001220Silver-seed gourdcarcgybB0573
CsGy2G001220Cucumber (Chinese Long) v3cgybcucB059