Csa2G004720 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G004720
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMultiprotein-bridging factor, putative; contains IPR010982 (Lambda repressor-like, DNA-binding domain), IPR013729 (Multiprotein bridging factor 1, N-terminal)
LocationChr2 : 772513 .. 773246 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTATCAAATTCTCAACGACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGAGATTTTCGGATTAAAAGCGTTTTCTCAAATTGCGATTTAATGAAGGACTTTGGTGGTTGTTTATAGGATGTGTGAATATTGTGAGAAATGGGATTGAGTGGAAGAAATGAGAGTCGTTGATTTGTAAAGAATGTATGGATCTACGTGGTTTAAGAATTAGTTAAAAATTAATGTTATATACGAAGTACCTTGCGACTTAAAATGTATATTCATTAAAAAAATCTAAAAAATGAAATA

mRNA sequence

ATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGA

Coding sequence (CDS)

ATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGA

Protein sequence

MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK*
Homology
[Close]
BLAST of Csa2G004720 vs. Swiss-Prot
Match: MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.5e-58
Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKK--V 60
           MPSR+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R+G  VQTVKKFDAG NKK   
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  TAAPV-NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYE 120
           TA PV N +KLEE TEPAA+DRV  EVR  IQKARLEKKMSQA+LAKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKMEKVLGVKLRGRSGK 146
           NGKAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]
BLAST of Csa2G004720 vs. Swiss-Prot
Match: MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 73/137 (53.28%), Postives = 102/137 (74.45%), Query Frame = 1 

Query: 7   GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAP-VNA 66
           G ++QDWEPVV+ K  P A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 126
           +KL++ TE  + DRV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGR 143
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of Csa2G004720 vs. Swiss-Prot
Match: MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 69/137 (50.36%), Postives = 100/137 (72.99%), Query Frame = 1 

Query: 7   GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAP-VNA 66
           G ++QDWEPVV+ K    A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 126
           + L++ TE    +RV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGR 143
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of Csa2G004720 vs. Swiss-Prot
Match: EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 1 

Query: 12  DWEPV-VLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEE 71
           DW+ V VL K  P A   +  +A+  A R G  V+T KK+ AG NK+ T    N  KL+ 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR-NTAKLDR 64

Query: 72  GTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAK 131
            TE    DRV +EV + IQ+ R  K M+Q +LA +INE+ QV+ +YE GKA+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGK 124

Query: 132 MEKVLGVKLRGR 143
           +E+V+G+KLRG+
Sbjct: 125 IERVIGLKLRGK 135

[Close]
BLAST of Csa2G004720 vs. Swiss-Prot
Match: EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus GN=Edf1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 1 

Query: 12  DWEPV-VLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEE 71
           DW+ V VL K  P A   +  +A+  A R G  V+T KK+ AG NK+ +    N  KL+ 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK-NTAKLDR 64

Query: 72  GTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAK 131
            TE    DRV +EV + IQ+ R  K ++Q +LA +INE+ QV+ +YE+G+A+PN  VL K
Sbjct: 65  ETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGK 124

Query: 132 MEKVLGVKLRGR 143
           +E+ +G+KLRG+
Sbjct: 125 IERAIGLKLRGK 135

[Close]
BLAST of Csa2G004720 vs. TrEMBL
Match: A0A0A0LFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004720 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.3e-73
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120
           APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 146
           AVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]
BLAST of Csa2G004720 vs. TrEMBL
Match: F6HH28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04080 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.4e-60
Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MP+RFPGALSQDWEPVVLHK+KPKAQ LRDPKAVN+AIRSGAPVQT+KKFD G NKK  A
Sbjct: 1   MPNRFPGALSQDWEPVVLHKSKPKAQELRDPKAVNKAIRSGAPVQTLKKFDGGANKK--A 60

Query: 61  APV-NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENG 120
           AP+ N RKL+EGTEPAALDRV+V+VRQ IQKARLEKKMSQAELAK INER QVVQEYENG
Sbjct: 61  APIMNTRKLDEGTEPAALDRVSVDVRQLIQKARLEKKMSQAELAKLINERPQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGRSGK 146
           KAVPNQAVLAKMEKVLGVKLRG+  K
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGKISK 144

[Close]
BLAST of Csa2G004720 vs. TrEMBL
Match: W9QP00_9ROSA (Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020825 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.2e-60
Identity = 123/147 (83.67%), Postives = 137/147 (93.20%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSR+PGA++QDWEPVV+HK+KPKAQALRDPKAVNQA+RSGA VQTVKKFDAG NKK +A
Sbjct: 1   MPSRYPGAITQDWEPVVVHKSKPKAQALRDPKAVNQALRSGAGVQTVKKFDAGSNKKSSA 60

Query: 61  AP--VNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYEN 120
           A   V+A+KL+EGTEPAA+ RVA E+RQAIQKARLEKKMSQA+LAKQINER QVVQEYEN
Sbjct: 61  AAPAVDAKKLDEGTEPAAMGRVAPELRQAIQKARLEKKMSQADLAKQINERPQVVQEYEN 120

Query: 121 GKAVPNQAVLAKMEKVLGVKLRGRSGK 146
           GKAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 121 GKAVPNQAVLAKMEKVLGVKLRGKIGK 147

[Close]
BLAST of Csa2G004720 vs. TrEMBL
Match: A0A0D2SNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G069500 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-59
Identity = 118/145 (81.38%), Postives = 132/145 (91.03%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MP+RF GA++QDWEPVVLHK+KPKAQ LRDPKAVN+A+RSGAPVQT+KKFDAG NKK   
Sbjct: 20  MPTRFGGAVTQDWEPVVLHKSKPKAQDLRDPKAVNRALRSGAPVQTIKKFDAGSNKKTAG 79

Query: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120
             VNARKL+EGTEPAALDRV  +VRQ IQKARLEKK+SQAELAK INE+ +VVQEYENGK
Sbjct: 80  PVVNARKLDEGTEPAALDRVPTDVRQTIQKARLEKKLSQAELAKLINEQLKVVQEYENGK 139

Query: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 146
           AVPNQAVLAKME+VLGVKLRG+SGK
Sbjct: 140 AVPNQAVLAKMERVLGVKLRGKSGK 164

[Close]
BLAST of Csa2G004720 vs. TrEMBL
Match: W9QGJ2_9ROSA (Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020823 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.7e-59
Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSR+PGA++QDWEPVV+HK+KPKAQALRDPKAVNQA+RSGA VQTVKKFDAG NKK +A
Sbjct: 1   MPSRYPGAITQDWEPVVVHKSKPKAQALRDPKAVNQALRSGAGVQTVKKFDAGSNKKSSA 60

Query: 61  AP--VNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYEN 120
           A   VNA+KL+EGTEPAA+ RVA E+RQ IQKARLEKKMSQA+LAKQINER QVVQEYEN
Sbjct: 61  AAPAVNAKKLDEGTEPAAMGRVAPELRQVIQKARLEKKMSQADLAKQINERPQVVQEYEN 120

Query: 121 GKAVPNQAVLAKMEKVLGVKLRGRSGK 146
           GKAVPNQAVLAKMEKVL VKLRG+ GK
Sbjct: 121 GKAVPNQAVLAKMEKVLVVKLRGKIGK 147

[Close]
BLAST of Csa2G004720 vs. TAIR10
Match: AT3G24500.1 (AT3G24500.1 multiprotein bridging factor 1C)

HSP 1 Score: 226.1 bits (575), Expect = 1.4e-59
Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKK--V 60
           MPSR+PGA++QDWEPVVLHK+K K+Q LRDPKAVN A+R+G  VQTVKKFDAG NKK   
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  TAAPV-NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYE 120
           TA PV N +KLEE TEPAA+DRV  EVR  IQKARLEKKMSQA+LAKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKMEKVLGVKLRGRSGK 146
           NGKAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]
BLAST of Csa2G004720 vs. TAIR10
Match: AT3G58680.1 (AT3G58680.1 multiprotein bridging factor 1B)

HSP 1 Score: 150.6 bits (379), Expect = 7.5e-37
Identity = 73/137 (53.28%), Postives = 102/137 (74.45%), Query Frame = 1 

Query: 7   GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAP-VNA 66
           G ++QDWEPVV+ K  P A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 126
           +KL++ TE  + DRV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGR 143
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of Csa2G004720 vs. TAIR10
Match: AT2G42680.1 (AT2G42680.1 multiprotein bridging factor 1A)

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-35
Identity = 69/137 (50.36%), Postives = 100/137 (72.99%), Query Frame = 1 

Query: 7   GALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAP-VNA 66
           G ++QDWEPVV+ K    A A RD K VN A RSGA ++TV+KF+AG NK  ++   +N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQ 126
           + L++ TE    +RV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGR 143
            +L+K+E+ LG KLRG+
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|449443143|ref|XP_004139340.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.0e-72
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120
           APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 146
           AVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|659071135|ref|XP_008458302.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-70
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSRFPGALSQDWEPVVLHKAKPKAQ LRDPKAVNQAIRSGAPVQTVKKFDAGLNKKV A
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120
           APVNARKL+EGTEPAALDRV VEVRQAIQKAR+EKKMSQAELAKQINERTQVVQEYENGK
Sbjct: 128 APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 187

Query: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 146
           AVPNQAVLAKMEKVLGVKLRGRSGK
Sbjct: 188 AVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|225445278|ref|XP_002284605.1| (PREDICTED: multiprotein-bridging factor 1c [Vitis vinifera])

HSP 1 Score: 239.6 bits (610), Expect = 3.5e-60
Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MP+RFPGALSQDWEPVVLHK+KPKAQ LRDPKAVN+AIRSGAPVQT+KKFD G NKK  A
Sbjct: 1   MPNRFPGALSQDWEPVVLHKSKPKAQELRDPKAVNKAIRSGAPVQTLKKFDGGANKK--A 60

Query: 61  APV-NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENG 120
           AP+ N RKL+EGTEPAALDRV+V+VRQ IQKARLEKKMSQAELAK INER QVVQEYENG
Sbjct: 61  APIMNTRKLDEGTEPAALDRVSVDVRQLIQKARLEKKMSQAELAKLINERPQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGRSGK 146
           KAVPNQAVLAKMEKVLGVKLRG+  K
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGKISK 144

[Close]
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|703070662|ref|XP_010088841.1| (Multiprotein-bridging factor 1c [Morus notabilis])

HSP 1 Score: 239.2 bits (609), Expect = 4.5e-60
Identity = 123/147 (83.67%), Postives = 137/147 (93.20%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSR+PGA++QDWEPVV+HK+KPKAQALRDPKAVNQA+RSGA VQTVKKFDAG NKK +A
Sbjct: 1   MPSRYPGAITQDWEPVVVHKSKPKAQALRDPKAVNQALRSGAGVQTVKKFDAGSNKKSSA 60

Query: 61  AP--VNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYEN 120
           A   V+A+KL+EGTEPAA+ RVA E+RQAIQKARLEKKMSQA+LAKQINER QVVQEYEN
Sbjct: 61  AAPAVDAKKLDEGTEPAAMGRVAPELRQAIQKARLEKKMSQADLAKQINERPQVVQEYEN 120

Query: 121 GKAVPNQAVLAKMEKVLGVKLRGRSGK 146
           GKAVPNQAVLAKMEKVLGVKLRG+ GK
Sbjct: 121 GKAVPNQAVLAKMEKVLGVKLRGKIGK 147

[Close]
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|719980400|ref|XP_010249785.1| (PREDICTED: multiprotein-bridging factor 1c [Nelumbo nucifera])

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59
Identity = 125/145 (86.21%), Postives = 132/145 (91.03%), Query Frame = 1 

Query: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60
           MPSRFPGAL+QDWEPVVLHK+KP AQALRDPKAVNQA+RSGA VQTVKKFDAG NKK  A
Sbjct: 1   MPSRFPGALTQDWEPVVLHKSKPNAQALRDPKAVNQALRSGAAVQTVKKFDAGSNKK-PA 60

Query: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120
             VNARKL+EGTEPAALD+V+ EVRQAIQKARL KKMSQAELAK INERT VVQEYENGK
Sbjct: 61  TVVNARKLDEGTEPAALDKVSTEVRQAIQKARLAKKMSQAELAKLINERTLVVQEYENGK 120

Query: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 146
           AVPNQAVLAKMEKVL VKLRG+S K
Sbjct: 121 AVPNQAVLAKMEKVLKVKLRGKSHK 144

The following BLAST results are available for this feature:
BLAST of Csa2G004720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MBF1C_ARATH2.5e-5880.41Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1[more]
MBF1B_ARATH1.3e-3553.28Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1[more]
MBF1A_ARATH1.2e-3350.36Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1[more]
EDF1_XENLA1.3e-2245.45Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 P... [more]
EDF1_MOUSE1.1e-2143.18Endothelial differentiation-related factor 1 OS=Mus musculus GN=Edf1 PE=1 SV=1[more]
BLAST of Csa2G004720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFV9_CUCSA7.3e-73100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004720 PE=4 SV=1[more]
F6HH28_VITVI2.4e-6085.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04080 PE=4 SV=... [more]
W9QP00_9ROSA3.2e-6083.67Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020825 PE=4 SV=1[more]
A0A0D2SNV8_GOSRA2.1e-5981.38Uncharacterized protein OS=Gossypium raimondii GN=B456_010G069500 PE=4 SV=1[more]
W9QGJ2_9ROSA2.7e-5982.99Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020823 PE=4 SV=1[more]
BLAST of Csa2G004720 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24500.11.4e-5980.41 multiprotein bridging factor 1C[more]
AT3G58680.17.5e-3753.28 multiprotein bridging factor 1B[more]
AT2G42680.17.0e-3550.36 multiprotein bridging factor 1A[more]
BLAST of Csa2G004720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443143|ref|XP_004139340.1|1.0e-72100.00PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus][more]
gi|659071135|ref|XP_008458302.1|1.7e-7096.55PREDICTED: multiprotein-bridging factor 1c [Cucumis melo][more]
gi|225445278|ref|XP_002284605.1|3.5e-6085.62PREDICTED: multiprotein-bridging factor 1c [Vitis vinifera][more]
gi|703070662|ref|XP_010088841.1|4.5e-6083.67Multiprotein-bridging factor 1c [Morus notabilis][more]
gi|719980400|ref|XP_010249785.1|1.7e-5986.21PREDICTED: multiprotein-bridging factor 1c [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001387Cro/C1-type_HTH
IPR010982Lambda_DNA-bd_dom_sf
IPR013729MBF1_N
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006457 protein folding
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G004720.1Csa2G004720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 88..139
score: 7.9
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 87..142
score: 2.0
IPR001387Cro/C1-type helix-turn-helix domainPROFILEPS50943HTH_CROC1coord: 88..142
score: 13
IPR010982Lambda repressor-like, DNA-binding domainGENE3DG3DSA:1.10.260.40coord: 85..139
score: 9.8
IPR010982Lambda repressor-like, DNA-binding domainunknownSSF47413lambda repressor-like DNA-binding domainscoord: 82..139
score: 2.11
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 11..80
score: 3.2
NoneNo IPR availableunknownCoilCoilcoord: 88..110
scor
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 54..142
score: 4.0
NoneNo IPR availablePANTHERPTHR10245:SF33SUBFAMILY NOT NAMEDcoord: 54..142
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G004720Cla016761Watermelon (97103) v1cuwmB162
Csa2G004720MELO3C004553Melon (DHL92) v3.5.1cumeB140
Csa2G004720ClCG11G002510Watermelon (Charleston Gray)cuwcgB096
Csa2G004720Lsi11G002660Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G004720MELO3C004553.2Melon (DHL92) v3.6.1cumedB133
Csa2G004720Cla97C11G208930Watermelon (97103) v2cuwmbB103
Csa2G004720Bhi06G001730Wax gourdcuwgoB131
Csa2G004720CSPI02G01220Wild cucumber (PI 183967)cpicuB065
Csa2G004720Cucsa.116320Cucumber (Gy14) v1cgycuB150
Csa2G004720CmaCh12G012440Cucurbita maxima (Rimu)cmacuB173
Csa2G004720CmoCh12G012750Cucurbita moschata (Rifu)cmocuB157
Csa2G004720Cp4.1LG07g09940Cucurbita pepo (Zucchini)cpecuB821
Csa2G004720CsGy2G001220Cucumber (Gy14) v2cgybcuB056
Csa2G004720Carg25993Silver-seed gourdcarcuB0304
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G004720Bottle gourd (USVL1VR-Ls)culsiB131
Csa2G004720Melon (DHL92) v3.6.1cumedB109
Csa2G004720Silver-seed gourdcarcuB0042
Csa2G004720Silver-seed gourdcarcuB0139
Csa2G004720Silver-seed gourdcarcuB0598
Csa2G004720Wax gourdcuwgoB214
Csa2G004720Cucurbita maxima (Rimu)cmacuB075
Csa2G004720Cucurbita maxima (Rimu)cmacuB119
Csa2G004720Cucurbita maxima (Rimu)cmacuB791
Csa2G004720Cucurbita moschata (Rifu)cmocuB065
Csa2G004720Cucurbita moschata (Rifu)cmocuB105
Csa2G004720Cucurbita moschata (Rifu)cmocuB783
Csa2G004720Melon (DHL92) v3.5.1cumeB090
Csa2G004720Cucurbita pepo (Zucchini)cpecuB103
Csa2G004720Cucurbita pepo (Zucchini)cpecuB370
Csa2G004720Cucurbita pepo (Zucchini)cpecuB662