CSPI02G01220 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGAACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGAGATTTTCGGATTAAAAGCGTTTTCTCAAATTGCGATTTAATGAAGGGCTTTGGTGGTTGTTTATAGGATGTGTGAATATTGTGAGAAATGGGATTGAGTGGAAGAAATGAGAGTCGTTGATTTGTAAAGAATGTATGGATCTACGTGGTTTAAGAAATAGTTAAAAATGAATGTTATATACGAAGTACCTTGCGAC ATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGAACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGA ATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGAACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGA
BLAST of CSPI02G01220 vs. Swiss-Prot
Match: MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 4.4e-55 Identity = 118/148 (79.73%), Postives = 130/148 (87.84%), Query Frame = 1
BLAST of CSPI02G01220 vs. Swiss-Prot
Match: MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-32 Identity = 72/137 (52.55%), Postives = 104/137 (75.91%), Query Frame = 1
BLAST of CSPI02G01220 vs. Swiss-Prot
Match: MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 9.9e-31 Identity = 69/137 (50.36%), Postives = 101/137 (73.72%), Query Frame = 1
BLAST of CSPI02G01220 vs. Swiss-Prot
Match: EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19 Identity = 59/132 (44.70%), Postives = 84/132 (63.64%), Query Frame = 1
BLAST of CSPI02G01220 vs. Swiss-Prot
Match: EDF1_DANRE (Endothelial differentiation-related factor 1 homolog OS=Danio rerio GN=edf1 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.9e-18 Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 1
BLAST of CSPI02G01220 vs. TrEMBL
Match: A0A0A0LFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004720 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.3e-69 Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI02G01220 vs. TrEMBL
Match: W9QP00_9ROSA (Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020825 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.1e-57 Identity = 123/147 (83.67%), Postives = 137/147 (93.20%), Query Frame = 1
BLAST of CSPI02G01220 vs. TrEMBL
Match: F6HH28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04080 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 4.3e-57 Identity = 124/146 (84.93%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of CSPI02G01220 vs. TrEMBL
Match: W9QGJ2_9ROSA (Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020823 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 9.5e-57 Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 1
BLAST of CSPI02G01220 vs. TrEMBL
Match: A0A0D2SNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G069500 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.6e-56 Identity = 117/145 (80.69%), Postives = 132/145 (91.03%), Query Frame = 1
BLAST of CSPI02G01220 vs. TAIR10
Match: AT3G24500.1 (AT3G24500.1 multiprotein bridging factor 1C) HSP 1 Score: 215.3 bits (547), Expect = 2.5e-56 Identity = 118/148 (79.73%), Postives = 130/148 (87.84%), Query Frame = 1
BLAST of CSPI02G01220 vs. TAIR10
Match: AT3G58680.1 (AT3G58680.1 multiprotein bridging factor 1B) HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33 Identity = 72/137 (52.55%), Postives = 104/137 (75.91%), Query Frame = 1
BLAST of CSPI02G01220 vs. TAIR10
Match: AT2G42680.1 (AT2G42680.1 multiprotein bridging factor 1A) HSP 1 Score: 134.4 bits (337), Expect = 5.6e-32 Identity = 69/137 (50.36%), Postives = 101/137 (73.72%), Query Frame = 1
BLAST of CSPI02G01220 vs. NCBI nr
Match: gi|449443143|ref|XP_004139340.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus]) HSP 1 Score: 270.4 bits (690), Expect = 1.8e-69 Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI02G01220 vs. NCBI nr
Match: gi|659071135|ref|XP_008458302.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]) HSP 1 Score: 263.1 bits (671), Expect = 2.9e-67 Identity = 139/145 (95.86%), Postives = 142/145 (97.93%), Query Frame = 1
BLAST of CSPI02G01220 vs. NCBI nr
Match: gi|703070662|ref|XP_010088841.1| (Multiprotein-bridging factor 1c [Morus notabilis]) HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57 Identity = 123/147 (83.67%), Postives = 137/147 (93.20%), Query Frame = 1
BLAST of CSPI02G01220 vs. NCBI nr
Match: gi|225445278|ref|XP_002284605.1| (PREDICTED: multiprotein-bridging factor 1c [Vitis vinifera]) HSP 1 Score: 228.8 bits (582), Expect = 6.1e-57 Identity = 124/146 (84.93%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of CSPI02G01220 vs. NCBI nr
Match: gi|703070655|ref|XP_010088839.1| (Multiprotein-bridging factor 1c [Morus notabilis]) HSP 1 Score: 227.6 bits (579), Expect = 1.4e-56 Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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