CmaCh11G007890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGTAATTGTTCATAAAATTTGGTGGACAGTTGATGGCCACAAAAATGATAAAATCCAGACGCTTCTTCTTCTTTCTAGAAATCATGCAACAATCTTAAACGCATCTATGTAAGCTGTTTCTTCATCCATTCGGAATCCAAGGTTTTGCCATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAGTTGAACAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATTGATTAGCCGGCATAGTCGAAGATTCAATCTCCGTGCGAGCGTATCTTCCACCATTTCAACGGAGGAATTTGAATATGCGAGTCCGTTTGAGGATGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTTGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAAGATTCTTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTAAGGATTCTACCATCTTCCCCTGGTGAACTTATTGCTCTGCTTCAATTAGAGATTTAACTTCATGGTTGCATCGAATTCAACTTCGAAAGAGTTTTGATTACATATTTGAATCTGGATTGTGATTCTGTTTATTCGCCAAGCATTAGTTGATTTGACATGATTTAATGAATAAACGAGAATGTCAATATAACGATTCACAAATTAACTTTGATTGCCATAAACAAAAGAGATTTCTTATGCTGCTTGCTAGTTGCTGGCACTTTGTTTTGGTGTTAATGGTAGAGATGACACAAAATCAAACAGTTCAAAGTGGAGAACCCTGTTAAAGTTAGGCATAGCACTAAATTGTTAATTTACCCATTATTAACATATTTCTACCAAACTGAAATCAACATTACTGAACCTTCTCGTCTCGTCATTTTTTGTTTCATGATAATATAGTTCAGAAGGAATTTGGAGAAAATGTGCTTAAACTGCTTATTAAGAACATCAGTTCATTAATGACAAATCAGAAGAATGTAGTTTTTCGTATAACACAACTTTTCTTGAATGCTGAAAAACTTACTAAATGATTTACCTTAGATTCAGAATTTGATTTTACTTCCTATTTCTGTCGTTGGTGCATATTGTTCCGGTGGTGAATATTGTTCAGAATCTGACATATTGCCGTAGAAAATGAAGTCGTATTCAGAAGTTAACAAGAGTCATATGCTAAGATAGTTAAAAGATTAAGTATTGTGGTTATATTAGTCAAACTTTAAATAACTGGACAAGAGTCTGCTAATTTTCTTCCTTCGATTTGCAGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAACTAGTAACAGAGATCTTCCATATGGGTATGGAGAGCCTGATTGTCACTTTTTACTCATCTGCTTTCTATTTGATCTTGGCCAGTCTAGTTATAGAGGAATTATGAAGGAAGCTATCACGAATGTAGTTGAACTGTGCTCTTTTTCTCATTTTCGTTTTATCTTTTTCCACCGAAAGAAAATCGAATCATTGATTTTAAGCTGAGGAAATTCTATTTAACAAAAAGATCATGACCGTATTCTCGAGAAACGGTCTAATTCATAGCAAAAGACTGATTACTAGCTCTTCATAGTAGAACCAACGATGGTGAACTGGATAAGTTAACAATAAGATTGTTACTTACTGTTAGGTGGATCTCAATGTAGAAGATTGTATTCTTCTTTCTTTTATCAAATAACTTAGGAGCCATACGAGATGAAAGTCTCATACACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCTCCTTTCGACTCTGACTCTCCCACTCAAGTAGTTGCTTTTCTTTTTGTTACTTCTAAAGTAGTTGTTTCAGTTTCAACCACTCGAATTTTCGATATTCCTTTTTATTTCTCACCAAATGAATGACATGATTACTAGCTAATTCATAGTGGAACCAAAGAGGGTGAACTGGATAGGTTAACAATAACATTGATAAAATGAAAGGAGTTCGAGTGGGTAAATAAGACCTCTCTGTTACTCAACAACCCTCCTTCTCTTTACACTTTCAGGTATGAGATTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCGTATGCCCATTATGGGATAATGGGAATGCGCCAGCCCAATAA ATGACAGGTTTTGCCATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAGTTGAACAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATTGATTAGCCGGCATAGTCGAAGATTCAATCTCCGTGCGAGCGTATCTTCCACCATTTCAACGGAGGAATTTGAATATGCGAGTCCGTTTGAGGATGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTTGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAAGATTCTTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAACTAGTAACAGAGATCTTCCATATGGCTCATGTCCCGTATGCCCATTATGGGATAATGGGAATGCGCCAGCCCAATAA ATGACAGGTTTTGCCATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAGTTGAACAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATTGATTAGCCGGCATAGTCGAAGATTCAATCTCCGTGCGAGCGTATCTTCCACCATTTCAACGGAGGAATTTGAATATGCGAGTCCGTTTGAGGATGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTTGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAAGATTCTTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAACTAGTAACAGAGATCTTCCATATGGCTCATGTCCCGTATGCCCATTATGGGATAATGGGAATGCGCCAGCCCAATAA MTGFAMDVLKFSSVPLHFTAKLNKSRFLKQCLQVNLLPSLPSSLISRHSRRFNLRASVSSTISTEEFEYASPFEDEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLTSNRDLPYGSCPVCPLWDNGNAPAQ
BLAST of CmaCh11G007890 vs. Swiss-Prot
Match: PTC52_ARATH (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.4e-88 Identity = 146/207 (70.53%), Postives = 168/207 (81.16%), Query Frame = 1
BLAST of CmaCh11G007890 vs. Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 7.8e-39 Identity = 95/246 (38.62%), Postives = 129/246 (52.44%), Query Frame = 1
BLAST of CmaCh11G007890 vs. Swiss-Prot
Match: TIC55_PEA (Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23 Identity = 62/175 (35.43%), Postives = 87/175 (49.71%), Query Frame = 1
BLAST of CmaCh11G007890 vs. Swiss-Prot
Match: TIC55_ARATH (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.5e-23 Identity = 62/189 (32.80%), Postives = 95/189 (50.26%), Query Frame = 1
BLAST of CmaCh11G007890 vs. Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.2e-12 Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TrEMBL
Match: A0A0A0LZA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600140 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 4.7e-115 Identity = 196/238 (82.35%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TrEMBL
Match: A0A0A0LX68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600130 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 2.3e-106 Identity = 183/238 (76.89%), Postives = 197/238 (82.77%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TrEMBL
Match: M5W8K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004005mg PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.9e-96 Identity = 164/240 (68.33%), Postives = 193/240 (80.42%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TrEMBL
Match: A0A067L4E1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01891 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 7.3e-92 Identity = 160/244 (65.57%), Postives = 190/244 (77.87%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TrEMBL
Match: W9SBE7_9ROSA (Protochlorophyllide-dependent translocon component 52 OS=Morus notabilis GN=L484_019086 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.1e-90 Identity = 154/244 (63.11%), Postives = 188/244 (77.05%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TAIR10
Match: AT4G25650.2 (AT4G25650.2 ACD1-like) HSP 1 Score: 326.6 bits (836), Expect = 1.4e-89 Identity = 146/207 (70.53%), Postives = 168/207 (81.16%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TAIR10
Match: AT3G44880.1 (AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain) HSP 1 Score: 162.2 bits (409), Expect = 4.4e-40 Identity = 95/246 (38.62%), Postives = 129/246 (52.44%), Query Frame = 1
BLAST of CmaCh11G007890 vs. TAIR10
Match: AT2G24820.1 (AT2G24820.1 translocon at the inner envelope membrane of chloroplasts 55-II) HSP 1 Score: 110.2 bits (274), Expect = 2.0e-24 Identity = 62/189 (32.80%), Postives = 95/189 (50.26%), Query Frame = 1
BLAST of CmaCh11G007890 vs. NCBI nr
Match: gi|778663338|ref|XP_004144087.2| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 422.2 bits (1084), Expect = 6.7e-115 Identity = 196/238 (82.35%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of CmaCh11G007890 vs. NCBI nr
Match: gi|700211278|gb|KGN66374.1| (hypothetical protein Csa_1G600140 [Cucumis sativus]) HSP 1 Score: 422.2 bits (1084), Expect = 6.7e-115 Identity = 196/238 (82.35%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of CmaCh11G007890 vs. NCBI nr
Match: gi|659100308|ref|XP_008451029.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo]) HSP 1 Score: 421.0 bits (1081), Expect = 1.5e-114 Identity = 195/238 (81.93%), Postives = 210/238 (88.24%), Query Frame = 1
BLAST of CmaCh11G007890 vs. NCBI nr
Match: gi|659100310|ref|XP_008451030.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 397.5 bits (1020), Expect = 1.8e-107 Identity = 187/241 (77.59%), Postives = 205/241 (85.06%), Query Frame = 1
BLAST of CmaCh11G007890 vs. NCBI nr
Match: gi|659100312|ref|XP_008451031.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Cucumis melo]) HSP 1 Score: 397.5 bits (1020), Expect = 1.8e-107 Identity = 187/241 (77.59%), Postives = 205/241 (85.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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