Carg06127 (gene) Silver-seed gourd

Overview
NameCarg06127
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotochlorophyllide-dependent translocon component 52, chloroplastic-like
LocationCucurbita_argyrosperma_scaffold_026 : 1201000 .. 1204057 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATTTCAATTTTCCGCTTCAAGAAGAAGAATCTGATTTCGCCATTTCCTCGTTCTGCGCGAAGGAATCAGCCATGGAGGTTGCGGGAATTTCTTCTGCTCAGCTAATTCATTTCCCAACCACACTCCACAGAACCCTAGCCTGCAATTCCTGCTGTGTTGCCTCGCATCGGAATCCGCTGCCGAGATTGAGATCATCATCTTTCAATTTCAAAACCGTGACGCATCGAAATGTGTTGAGGAAGTGCGAGTTGATTCGCACGGCTTTGGCGTCCGATGTCGTTGGTACAGAACAGCCCGAGATGGAGGAGGAGAAGGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTTATGCAGGTGTGCGATTTGGACAAGAGAGTGCCGATTGCGAAGAAGGTGTTAGGGTTGGATTTGGTGGTGTGGTGGGACAGGAATGAGAATGCATGGAAGGTGTTTGATGATAGTTGTCCGCATAGATTGGCGCCGTTGTCCGAAGGAAGGATCGATCAGTGGGGGAGGCTACAGTGCGTGTACCATGGATGGTGCTTTAATGGCTCCGGTGACTGCAAATTCATCCCTCAAGCGCCCCCTGATGGCCCTCCGGTAACAATTTTATTTTGCTCCATTTTAATCTCTGTTCCTTTGAAACGTTTGGATTGTTGCAATTTTAAAAAGTGACGTTTTGATCCCTTTATTTTCTTTTTTAGATCACTTTTTTTAAAAGTAAAACCAAAATAGAAGTTGAAATTTAAGAGAAGATTTGATTGGGTATGATCATAGATTAATCTTATATGCATTATGAAGTATCAAAATTTTTGGAAAGAACTAAAGTTCCAGATTCGACTTGTTGGATGATGAAAGTCTCACATCGGTTAATTTAGAGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTGTGAGGCCTTTATGGAAAGTCCAAAGCAAACCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACACGACTTAGTATTTCTTCATTCATTCTCATCCAATTTGTTGCTTACTGGTACCTAAGCAATTCTTCCCGCTGCGAACTTCCCTCCTGTGTCAGCAAACCATCATCCATTAATACAACACCAACATTATTTAATTCTAAATTTAGAGCTATGCCTATAGTACCTTCTTTAAATTTGACTAATTCACCTGCCATTACTTCATCAAGACCATAAATACTAACAATGTCGCCTACTTGAAGTACAATACGGGCATTTACAATTTTTACTTAAATATAAAAACACAAAGTAGAAAGATTAAACAGTTGTTTTGATCTTTATAGACTTAAGCAAATGCTTAAAGTGTGTATATGGGTTATAAAATATTTAATCAATGCACCTGTGTAAAAAATCATAATAGTTTATGAACAAATTTGATCTCTAATCTTGAATAATAAATTTCAAATGATATTTTTTACTATAGGGACGAAATCATTATAAGAGTAAATTTAGGGACTAAATTGTTATTAATTAAAGTTGGAGGACTTACTTCTTTAAAAATTCTAGACCAAAAGTGGTTTTCTGGAGAATAATTATCTTTCATGCATAACAAAATTGCAGGCTGGATTTACAAATATCATGAACATTTACATGAATTGGTATTATATGCAGGTTCACTCATCCAAGAAGGCATGCGTCGCTGTGTATCCAAGCACAGTGCAGAATGGCATAGTGTGGTTCTGGCCAAACTCTGATCCCAAATTCAAAGATGTCATTATGGAGAAGAAACCTCCCTTTATTCCGGAGCTGGACGACCCATCTTATGTTAAGTTAGAGGGAAATAGAGACATGGCCTACGGGTAATCACTTTGAACCCTCTTTCTGATTTTGATGCTTTTTGAAATGTCAAATGCAAAGAATCGAAACTATGTGTGTGAGATCCCACGTCGGTCGGGAGGAGAACGAAACATTCTTTATAAAAGTGTGGAAACCTCTCCCTAGCAAACGCGTTATAAAAACTTTGAGGAGAAGCTTGAAAGAGAAAGCCCAAAGAGAATAATATCTGCTAGCGGTGGGCTTGGGTTGTTGCAAGCAAAATAAAGTAAAGTGGCTTGTTTATCCTTTTTAGGTAGTGTTTACTCATTCTAGTGTCAAAATGTGGGAAACAACCGTCCCCATAGATTGATGGATCGAATTTGTGCCGTCATGGATATTCAGACCATGTTTTGCAGGAGTTAACGAACTTCGTAAGGCTAAACCAAAGTTTGACTGATAACTAGATTGTAACAAGAAGGGTGCTGTGTGTTTGTGTGTTTGTTGAGGTGATTAGTCACTAGATAATCTTTTGAATGAGAATGGGAAGGAAAATGGTGTTGAGAGTATCATATTCATTCATCTGAACTTCTTAGTATAGTGATGATTTTATAAGTACCAAAATGGTAGTGTAAGATCCCATATCGGTTGGAGAGGGGAAAGAAAAATTCATTGTAAGGATGTGAAAACCTCTCCCTAACAGACGCGTTTTAAAACCATGAGGCTGACGGCGATACGTAACGGGCCAAAATGGACCATATCTGTTAGTGGTGGGCTTGAACTATTACAAATGGAATCAGAGCCAAATACCGGCTGATGTGCTAGCAAGGACACTGCCCCCAGGGGGCGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTCCTTATCAGGGTGTGGAAAACTCTTCCTAACAGACACGTTTTAAAACCGTGAGGCTGATGGTGATACGTAACGGGTCAGAGCGGACAATATCCATTAGTGGGTGGGCCTAGGCTGTTGTAGATAAATTACGAGTTTGAACTCTCACGATGTCATTTTCTGCCCTATGCTAGTAGTGATATCCTAATCCGATTACTTGTCATTGAAAATTGGCGTTTTTTCAGGTATGAGATACTGATTGAAAATCTTATGGACCCTGCCCATGTTCCATACGCGCACTACCGGATAATTCAAGCCCCACCATCATTGAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTGTTGCATTTAA

mRNA sequence

TGATTTCAATTTTCCGCTTCAAGAAGAAGAATCTGATTTCGCCATTTCCTCGTTCTGCGCGAAGGAATCAGCCATGGAGGTTGCGGGAATTTCTTCTGCTCAGCTAATTCATTTCCCAACCACACTCCACAGAACCCTAGCCTGCAATTCCTGCTGTGTTGCCTCGCATCGGAATCCGCTGCCGAGATTGAGATCATCATCTTTCAATTTCAAAACCGTGACGCATCGAAATGTGTTGAGGAAGTGCGAGTTGATTCGCACGGCTTTGGCGTCCGATGTCGTTGGTACAGAACAGCCCGAGATGGAGGAGGAGAAGGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTTATGCAGGTGTGCGATTTGGACAAGAGAGTGCCGATTGCGAAGAAGGTGTTAGGGTTGGATTTGGTGGTGTGGTGGGACAGGAATGAGAATGCATGGAAGGTGTTTGATGATAGTTGTCCGCATAGATTGGCGCCGTTGTCCGAAGGAAGGATCGATCAGTGGGGGAGGCTACAGTGCGTGTACCATGGATGGTGCTTTAATGGCTCCGGTGACTGCAAATTCATCCCTCAAGCGCCCCCTGATGGCCCTCCGGTTCACTCATCCAAGAAGGCATGCGTCGCTGTGTATCCAAGCACAGTGCAGAATGGCATAGTGTGGTATGAGATACTGATTGAAAATCTTATGGACCCTGCCCATGTTCCATACGCGCACTACCGGATAATTCAAGCCCCACCATCATTGAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTGTTGCATTTAA

Coding sequence (CDS)

ATGGAGGTTGCGGGAATTTCTTCTGCTCAGCTAATTCATTTCCCAACCACACTCCACAGAACCCTAGCCTGCAATTCCTGCTGTGTTGCCTCGCATCGGAATCCGCTGCCGAGATTGAGATCATCATCTTTCAATTTCAAAACCGTGACGCATCGAAATGTGTTGAGGAAGTGCGAGTTGATTCGCACGGCTTTGGCGTCCGATGTCGTTGGTACAGAACAGCCCGAGATGGAGGAGGAGAAGGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTTATGCAGGTGTGCGATTTGGACAAGAGAGTGCCGATTGCGAAGAAGGTGTTAGGGTTGGATTTGGTGGTGTGGTGGGACAGGAATGAGAATGCATGGAAGGTGTTTGATGATAGTTGTCCGCATAGATTGGCGCCGTTGTCCGAAGGAAGGATCGATCAGTGGGGGAGGCTACAGTGCGTGTACCATGGATGGTGCTTTAATGGCTCCGGTGACTGCAAATTCATCCCTCAAGCGCCCCCTGATGGCCCTCCGGTTCACTCATCCAAGAAGGCATGCGTCGCTGTGTATCCAAGCACAGTGCAGAATGGCATAGTGTGGTATGAGATACTGATTGAAAATCTTATGGACCCTGCCCATGTTCCATACGCGCACTACCGGATAATTCAAGCCCCACCATCATTGAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTGTTGCATTTAA

Protein sequence

MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCELIRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGIVWYEILIENLMDPAHVPYAHYRIIQAPPSLKNRYLCQFYLLNCCI
Homology
[Close]
BLAST of Carg06127 vs. NCBI nr
Match: XP_022961139.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 478.4 bits (1230), Expect = 1.4e-131
Identity = 229/271 (84.50%), Postives = 230/271 (84.87%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60

Query: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120
           IRTALASDVVGT+QPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR
Sbjct: 61  IRTALASDVVGTDQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120

Query: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180
           NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS
Sbjct: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180

Query: 181 SKKACVAVYPSTVQNGIVW----------------------------------------- 231
           SKKACVAVYPSTVQNGIVW                                         
Sbjct: 181 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAYG 240

[Close]
BLAST of Carg06127 vs. NCBI nr
Match: XP_022961138.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 478.4 bits (1230), Expect = 1.4e-131
Identity = 229/271 (84.50%), Postives = 230/271 (84.87%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60

Query: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120
           IRTALASDVVGT+QPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR
Sbjct: 61  IRTALASDVVGTDQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120

Query: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180
           NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS
Sbjct: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180

Query: 181 SKKACVAVYPSTVQNGIVW----------------------------------------- 231
           SKKACVAVYPSTVQNGIVW                                         
Sbjct: 181 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAYG 240

[Close]
BLAST of Carg06127 vs. NCBI nr
Match: XP_023533465.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.9 bits (1195), Expect = 1.6e-127
Identity = 225/271 (83.03%), Postives = 226/271 (83.39%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           MEVAGISSAQLIHFPTTLHRTLACNS CVAS  NPL RLRSSSFNFKT+THRNVLRKCEL
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSYCVASRWNPLSRLRSSSFNFKTLTHRNVLRKCEL 60

Query: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120
           IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR
Sbjct: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120

Query: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180
           NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS
Sbjct: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180

Query: 181 SKKACVAVYPSTVQNGIVW----------------------------------------- 231
           SKKACVAVYPSTVQNGIVW                                         
Sbjct: 181 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAYG 240

[Close]
BLAST of Carg06127 vs. NCBI nr
Match: XP_022988064.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 7.6e-125
Identity = 222/271 (81.92%), Postives = 223/271 (82.29%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           MEVAGISSAQLIHFPTTLHRTLACN  CVASHRNPLPR+RSSSFNFKT  H NVLRKCEL
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNFYCVASHRNPLPRMRSSSFNFKTAKHPNVLRKCEL 60

Query: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120
           IRTALASDVVGTEQPEMEEE EKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR
Sbjct: 61  IRTALASDVVGTEQPEMEEE-EKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120

Query: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180
           NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHS
Sbjct: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHS 180

Query: 181 SKKACVAVYPSTVQNGIVW----------------------------------------- 231
           SKKACVAVYPSTVQNGIVW                                         
Sbjct: 181 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAYG 240

[Close]
BLAST of Carg06127 vs. NCBI nr
Match: XP_022988065.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 7.6e-125
Identity = 222/271 (81.92%), Postives = 223/271 (82.29%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           MEVAGISSAQLIHFPTTLHRTLACN  CVASHRNPLPR+RSSSFNFKT  H NVLRKCEL
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNFYCVASHRNPLPRMRSSSFNFKTAKHPNVLRKCEL 60

Query: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120
           IRTALASDVVGTEQPEMEEE EKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR
Sbjct: 61  IRTALASDVVGTEQPEMEEE-EKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120

Query: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180
           NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVHS
Sbjct: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPSDGPPVHS 180

Query: 181 SKKACVAVYPSTVQNGIVW----------------------------------------- 231
           SKKACVAVYPSTVQNGIVW                                         
Sbjct: 181 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAYG 240

[Close]
BLAST of Carg06127 vs. TAIR10
Match: AT4G25650.2 (ACD1-like)

HSP 1 Score: 261.9 bits (668), Expect = 3.8e-70
Identity = 116/196 (59.18%), Postives = 136/196 (69.39%), Query Frame = 0 

Query: 78  EEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLA 137
           E   +KFDW+A WYPVM +CDLDK+VP  KKV+G+DLVVWWDRNE  WKV DD+CPHRLA
Sbjct: 73  EPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLA 132

Query: 138 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGI 197
           PLS+GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+ACVAVYPSTVQ+ I
Sbjct: 133 PLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEI 192

Query: 198 VW-----------------------------------------YEILIENLMDPAHVPYA 233
           +W                                         Y++L+ENLMDPAHVPYA
Sbjct: 193 IWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYA 252

[Close]
BLAST of Carg06127 vs. TAIR10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 155.6 bits (392), Expect = 3.9e-38
Identity = 76/187 (40.64%), Postives = 99/187 (52.94%), Query Frame = 0 

Query: 76  EMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHR 135
           + EEE  +F W   WYPV  V DLD  VP   ++LG DLV+W+DRN+  W  FDD CPHR
Sbjct: 74  DKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHR 133

Query: 136 LAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS--SKKACVAVYPSTV 195
           LAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP   +  S +AC   +P+ V
Sbjct: 134 LAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMV 193

Query: 196 QNGI--VW--------------------------------------YEILIENLMDPAHV 221
             G+  VW                                      Y+ L+EN+ DP+H+
Sbjct: 194 SQGLLFVWPDENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHI 253

[Close]
BLAST of Carg06127 vs. TAIR10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26
Identity = 71/228 (31.14%), Postives = 100/228 (43.86%), Query Frame = 0 

Query: 35  PLPRLRSSSFNFKTVTHRNVLRKCELIRTALASDVVGTEQPEMEEEKEK------FDWFA 94
           P+     S+    T     +LR+  +  TA++    G     +  E+EK      +DW  
Sbjct: 27  PIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTE 86

Query: 95  EWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWG 154
           EWYP+    ++ +  P+   V    +V++ D  E   + ++D CPHRLA LSEG++   G
Sbjct: 87  EWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-G 146

Query: 155 RLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGIVW--------- 214
           RL+C+YHGW F G G C  IPQ P         K ACV  Y      G+VW         
Sbjct: 147 RLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVKDSQGVVWVWMSTKTPP 206

Query: 215 ----------------------------YEILIENLMDPAHVPYAHYR 220
                                       + IL+ENLMDPAHVP +H R
Sbjct: 207 NPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISHDR 249

[Close]
BLAST of Carg06127 vs. TAIR10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 65.9 bits (159), Expect = 4.0e-11
Identity = 45/166 (27.11%), Postives = 67/166 (40.36%), Query Frame = 0 

Query: 90  WYPVMQVCDL--DKRVPIAKKVLGLDLVVWWDRNENAWKVF----------DDSCPHRLA 149
           WYPV    DL  D  VPI             +  E  W +F           ++C HR  
Sbjct: 221 WYPVAFTADLKHDTMVPI-------------ECFEQPWVIFRGEDGKPGCVRNTCAHRAC 280

Query: 150 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQA----------------------PPDG 209
           PL  G +++ GR+QC YHGW ++  G+CK +P                        P D 
Sbjct: 281 PLDLGTVNE-GRIQCPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDE 340

Query: 210 PPV----HSSKKACVAVYPSTVQNGIVWYEILIENLMDPAHVPYAH 218
           PP          +   ++   V +  V + +L++NL+D AH P+ H
Sbjct: 341 PPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTH 372

[Close]
BLAST of Carg06127 vs. Swiss-Prot
Match: sp|Q8W496|PTC52_ARATH (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.9e-69
Identity = 116/196 (59.18%), Postives = 136/196 (69.39%), Query Frame = 0 

Query: 78  EEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLA 137
           E   +KFDW+A WYPVM +CDLDK+VP  KKV+G+DLVVWWDRNE  WKV DD+CPHRLA
Sbjct: 73  EPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLA 132

Query: 138 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGI 197
           PLS+GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+ACVAVYPSTVQ+ I
Sbjct: 133 PLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEI 192

Query: 198 VW-----------------------------------------YEILIENLMDPAHVPYA 233
           +W                                         Y++L+ENLMDPAHVPYA
Sbjct: 193 IWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYA 252

[Close]
BLAST of Carg06127 vs. Swiss-Prot
Match: sp|Q9FYC2|PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.0e-37
Identity = 76/187 (40.64%), Postives = 99/187 (52.94%), Query Frame = 0 

Query: 76  EMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHR 135
           + EEE  +F W   WYPV  V DLD  VP   ++LG DLV+W+DRN+  W  FDD CPHR
Sbjct: 74  DKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHR 133

Query: 136 LAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS--SKKACVAVYPSTV 195
           LAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP   +  S +AC   +P+ V
Sbjct: 134 LAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMV 193

Query: 196 QNGI--VW--------------------------------------YEILIENLMDPAHV 221
             G+  VW                                      Y+ L+EN+ DP+H+
Sbjct: 194 SQGLLFVWPDENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHI 253

[Close]
BLAST of Carg06127 vs. Swiss-Prot
Match: sp|Q9SK50|TIC55_ARATH (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-25
Identity = 71/228 (31.14%), Postives = 100/228 (43.86%), Query Frame = 0 

Query: 35  PLPRLRSSSFNFKTVTHRNVLRKCELIRTALASDVVGTEQPEMEEEKEK------FDWFA 94
           P+     S+    T     +LR+  +  TA++    G     +  E+EK      +DW  
Sbjct: 27  PIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTE 86

Query: 95  EWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWG 154
           EWYP+    ++ +  P+   V    +V++ D  E   + ++D CPHRLA LSEG++   G
Sbjct: 87  EWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-G 146

Query: 155 RLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGIVW--------- 214
           RL+C+YHGW F G G C  IPQ P         K ACV  Y      G+VW         
Sbjct: 147 RLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVKDSQGVVWVWMSTKTPP 206

Query: 215 ----------------------------YEILIENLMDPAHVPYAHYR 220
                                       + IL+ENLMDPAHVP +H R
Sbjct: 207 NPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISHDR 249

[Close]
BLAST of Carg06127 vs. Swiss-Prot
Match: sp|O49931|TIC55_PEA (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-25
Identity = 63/179 (35.20%), Postives = 86/179 (48.04%), Query Frame = 0 

Query: 78  EEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLA 137
           E E   +DW  EWYP+    ++    P+  KV   ++V++ D N+  ++ ++D CPHRLA
Sbjct: 91  EREVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQ-FQCYEDRCPHRLA 150

Query: 138 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGI 197
            LSEG++   GRL+C+YHGW F G G C  IPQ P D       K ACV  Y      G+
Sbjct: 151 KLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPKSACVKTYEVRDSQGV 210

Query: 198 VW-------------------------------------YEILIENLMDPAHVPYAHYR 220
           +W                                     + IL+ENLMDPAHVP +H R
Sbjct: 211 LWVWMSRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDR 264

[Close]
BLAST of Carg06127 vs. Swiss-Prot
Match: sp|Q9XJ38|CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 47/156 (30.13%), Postives = 71/156 (45.51%), Query Frame = 0 

Query: 90  WYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGR 149
           WYP      L+  + +   + G+  V++ D + +A     DSC HR  PLS G++   G 
Sbjct: 134 WYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEH-SAPTCIKDSCAHRACPLSLGKVIN-GH 193

Query: 150 LQCVYHGWCFNGSGDCKFIPQA----------------------------PPDGPPVHSS 209
           +QC YHGW F+GSG C  +P                              PPD PP  ++
Sbjct: 194 VQCPYHGWEFDGSGACTKMPSTRMCHGVGVAALPCVEKDGFVWVWPGDGPPPDLPPDFTA 253

Query: 210 KKACVAVYPSTVQNGIVWYEILIENLMDPAHVPYAH 218
             A   V+   + +  V + +L+ENL+D AH P+ H
Sbjct: 254 PPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTH 287

[Close]
BLAST of Carg06127 vs. TrEMBL
Match: tr|A0A1S4DYB5|A0A1S4DYB5_CUCME (LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492541 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 3.4e-105
Identity = 189/269 (70.26%), Postives = 205/269 (76.21%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           MEVA ISS  LIH PTT +RTL  N   +AS+RNP PR RS S +FKT THRN +RKCEL
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFS-SFKTATHRNAIRKCEL 60

Query: 61  IRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDR 120
           IRTA+ASDVV +E+PE+EE  EKFDWFAEWYPVM VCDLDKRVP+ KKVLGLDLVVWWDR
Sbjct: 61  IRTAMASDVVTSERPEVEE--EKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWDR 120

Query: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180
           NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS
Sbjct: 121 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS 180

Query: 181 SKKACVAVYPSTVQNGIVW----------------------------------------- 229
           SKKACVA+YP+TVQN I+W                                         
Sbjct: 181 SKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYG 240

[Close]
BLAST of Carg06127 vs. TrEMBL
Match: tr|A0A0A0LX74|A0A0A0LX74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 6.4e-96
Identity = 166/201 (82.59%), Postives = 181/201 (90.05%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSF-NFKTVTHRNVLRKCE 60
           MEVA ISS  LI  PTT++RTL  N   +AS+RNPLPR RS SF NFKT THRN +RKCE
Sbjct: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97

Query: 61  LIRTALASDVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWD 120
           L+RTA+ASDVV +E+PE+EE  EKFDWFAEWYPVM VCDLDK+VPI KKVLGLDLVVWWD
Sbjct: 98  LLRTAMASDVVTSERPEVEE--EKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWD 157

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH
Sbjct: 158 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 217

Query: 181 SSKKACVAVYPSTVQNGIVWY 201
           SSKKACVA+YP+TVQNGI+W+
Sbjct: 218 SSKKACVAIYPTTVQNGILWF 236

[Close]
BLAST of Carg06127 vs. TrEMBL
Match: tr|A0A1S3BRB5|A0A1S3BRB5_CUCME (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492438 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.4e-90
Identity = 175/272 (64.34%), Postives = 187/272 (68.75%), Query Frame = 0 

Query: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60
           M VA ISS  L+H PTTL            +   P  RL SSSF   T T RNVLRKC L
Sbjct: 1   MGVATISSIHLLHIPTTL------------TLNPPRSRLLSSSFKI-TTTQRNVLRKCGL 60

Query: 61  IRTALAS-DVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWD 120
           + TA+AS DVV +E+  MEE  EKFDWF+EWYPVM VCDLDK+VP  KKVLGLDLVVWWD
Sbjct: 61  LHTAMASDDVVTSERRTMEE--EKFDWFSEWYPVMPVCDLDKKVPTGKKVLGLDLVVWWD 120

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180

Query: 181 SSKKACVAVYPSTVQNGIVW---------------------------------------- 231
           SSKKAC AVYPST+QNGIVW                                        
Sbjct: 181 SSKKACAAVYPSTMQNGIVWFWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAY 240

[Close]
BLAST of Carg06127 vs. TrEMBL
Match: tr|A0A0A0M2F3|A0A0A0M2F3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600160 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.0e-77
Identity = 150/204 (73.53%), Postives = 161/204 (78.92%), Query Frame = 0 

Query: 1   MEVAGI-SSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFK-TVTHRNVLR-K 60
           ME A I SS  L+H PTTL +              P  RL SS+ NFK T T RNV R  
Sbjct: 1   MEAATITSSLHLLHLPTTLVKP-------------PRSRLLSSN-NFKITTTQRNVFRNN 60

Query: 61  CELIRTALAS-DVVGTEQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVV 120
           C  + TA+AS DVV +E+ +MEE  EKFDWF+EWYPVM VCDLDK+VPI KKVLGLDLVV
Sbjct: 61  CGSLHTAMASDDVVTSERRKMEE--EKFDWFSEWYPVMPVCDLDKKVPIGKKVLGLDLVV 120

Query: 121 WWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGP 180
           WWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGP
Sbjct: 121 WWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGP 180

Query: 181 PVHSSKKACVAVYPSTVQNGIVWY 201
           PVHSSKKAC AVYPST QNGIVW+
Sbjct: 181 PVHSSKKACAAVYPSTTQNGIVWF 188

[Close]
BLAST of Carg06127 vs. TrEMBL
Match: tr|A0A1R3GIH7|A0A1R3GIH7_9ROSI (Pheophorbide a oxygenase OS=Corchorus olitorius OX=93759 GN=COLO4_35035 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.8e-75
Identity = 145/253 (57.31%), Postives = 166/253 (65.61%), Query Frame = 0 

Query: 34  NPLPRLRSSSFNFKTVTHRNVL---------RKCELIRTALASDVVGTEQP-------EM 93
           NP   +  + F    +TH+N+L          K +L  TAL+S+   TE+P       E+
Sbjct: 18  NPKTPMNKTQFLTNPLTHQNLLFXXXXXXNTSKSKLF-TALSSNPATTEEPKPPEXXXEV 77

Query: 94  EEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWDRNENAWKVFDDSCPHRLA 153
           E  KEKFDW++EWYPVM VCDLDKRVP AKKVLGLDLVVWWDRNEN WKVFDDSCPHRLA
Sbjct: 78  ESGKEKFDWYSEWYPVMPVCDLDKRVPHAKKVLGLDLVVWWDRNENEWKVFDDSCPHRLA 137

Query: 154 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAVYPSTVQNGI 213
           PLSEGRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ KKACVA YPSTVQ+ I
Sbjct: 138 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKKACVAAYPSTVQHDI 197

Query: 214 VW-----------------------------------------YEILIENLMDPAHVPYA 229
           VW                                         Y++LIENLMDPAHVPYA
Sbjct: 198 VWFWPNTDPQYKDIIMKKKPPYIPVLDDPSFTKTIGNRDIPYGYDVLIENLMDPAHVPYA 257

The following BLAST results are available for this feature:
BLAST of Carg06127 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961139.11.4e-13184.50protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor... [more]
XP_022961138.11.4e-13184.50protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor... [more]
XP_023533465.11.6e-12783.03protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucur... [more]
XP_022988064.17.6e-12581.92protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor... [more]
XP_022988065.17.6e-12581.92protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor... [more]
BLAST of Carg06127 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25650.23.8e-7059.18ACD1-like[more]
AT3G44880.13.9e-3840.64Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain[more]
AT2G24820.12.6e-2631.14translocon at the inner envelope membrane of chloroplasts 55-II[more]
AT1G44446.14.0e-1127.11Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain[more]
BLAST of Carg06127 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8W496|PTC52_ARATH6.9e-6959.18Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop... [more]
sp|Q9FYC2|PAO_ARATH7.0e-3740.64Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P... [more]
sp|Q9SK50|TIC55_ARATH4.7e-2531.14Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1[more]
sp|O49931|TIC55_PEA6.1e-2535.20Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1[more]
sp|Q9XJ38|CAO_DUNSA1.4e-1330.13Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE... [more]
BLAST of Carg06127 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DYB5|A0A1S4DYB5_CUCME3.4e-10570.26LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chlo... [more]
tr|A0A0A0LX74|A0A0A0LX74_CUCSA6.4e-9682.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1[more]
tr|A0A1S3BRB5|A0A1S3BRB5_CUCME1.4e-9064.34protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc... [more]
tr|A0A0A0M2F3|A0A0A0M2F3_CUCSA1.0e-7773.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600160 PE=4 SV=1[more]
tr|A0A1R3GIH7|A0A1R3GIH7_9ROSI4.8e-7557.31Pheophorbide a oxygenase OS=Corchorus olitorius OX=93759 GN=COLO4_35035 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06127-RACarg06127-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3DG3DSA:2.102.10.10coord: 86..222
e-value: 2.3E-35
score: 123.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILYSSF50022ISP domaincoord: 75..200
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 89..173
e-value: 1.1E-18
score: 66.9
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 90..200
score: 28.063
NoneNo IPR availablePANTHERPTHR21266:SF38SUBFAMILY NOT NAMEDcoord: 8..200
NoneNo IPR availablePANTHERPTHR21266:SF38SUBFAMILY NOT NAMEDcoord: 200..224
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 200..224
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 8..200