Carg18029 (gene) Silver-seed gourd

Overview
NameCarg18029
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotochlorophyllide-dependent translocon component 52, chloroplastic-like
LocationCucurbita_argyrosperma_scaffold_171 : 488519 .. 490956 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATGATAAAATCCAGACGCTTCTTCTTCTTTCTAGAAATCATGCAACGATCTTAAACGCATCTGTGTAAGCTGTTACTTCATCCATTCGGAATCCAAGGTTTGGCCATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAACTGAAGAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATCGATTAGCCGGCATAGTCGAAGATTTAAGCTCCGTGCGAGCGTATCATCCACCATTTCAACGGAGGAATTTGAATTTGCAAGTCCGTTTGAGGTTGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAGGATTTGTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTAAGGATTCTACCATCTTCCCCTTGTGAACTTATTGCTCTGCTTCAATTAGAGATTTAACTTTATGGTTGCATCGAATTCAACTTCGAAAGAGTTTTGATTACATATTTGAATCTGGATTGTGATTCTGTTTATTCGACAAGCATTAGTTGATTTGACATGATTTAATGAATAAACGAGAATGTCAGTATAACGATTCACAAATTAACTTTGATTGCCATAAACAAAAGAGATTTCTTATGCTGCTTGCTAGTTGCTGGCACTTTGTTTTGGTGTTCATGGTAGAGATAGCACAAGATCAAACAGTTCAAAGTTGAGAAGCCTGTTAAAGTTAGGCATAGCACTAAATTGTTAATTTACCCATTATTAACATATTTCTACCAAACTGAAATCAACATTACTGATCCTTCTCGTCTCGTCGTTTTTTGTTCCATGATAATATAGTTCAGTAGTAATTTGGAGAAAATGTGCTTAAACTGCTTATTAAGAACATCATTTCATTAATGACAAATCAGAAGAATGTAGTTTTTCTCAATGGATCTATTTCGTATAACACAACTTTGCTTGAATGCTGAAAAACTTACTAAATGATTTACCTTAGATTCAGAATTTGATTTTACTTCCTATTTCTGTCGTTAGTGCATATTGTTCCGGTGGTGAACATTGTTCAGAATCCGACATATTGCAGTAGAAAATGAAGTCGTATTCAGAAGTTAACAAGAGTGTCATATGCTAAGATAGTTAAAAGATTAAGTATTGTTGTTATATTAGTCAAACTTTAAATAACTGGACAAGAGTCGCTAATTTTCTTCCTTCGATTTGCAGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAATTAGTAACAGAGATCTTCCATATGGGTATGGAGAGCCTGATTGTCACTTTTTACTCATCTGCATTCTATTTGATCTTGGCCAGTCTAGTTATAGAGGAATTATGAAGGAAGCTATCACGAATGTAGTTGAACTGTGCTCTTTTTCTCATTTTCCTTTTCTTTTTCCACCGAAAGAAAATCGAATCATTGATTTTAAGCTGAGGAAATTCTATTTAACAAAAAGATCATGACCGTATTCTCCACAAACGGTCTAATTCATAGCAAAAGACTGATTACTAGCTCTTCATAGTAGAACCAACGATGGTGAACTGGATAAGTTAACAATAAGATTGTTACTTACTGTTAGGTGGATCTCAATGTAGAAGACTGTGTTCTTTCCTTTATCACTTAGCTTAGGAGTCATACAAGATAAAAGTTTCATGCACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCCCCTTTCGACTCTGACTCTCCCACTCAAGTAGTTGCTTTTCTTTTTGTTACTTCTAAAGTAGCTGTTTCAGTTTCAACCACTCGAATTTTCGATATTCCTGTTTATTTCTCACCGAACGAATGGCATGATTACTAGCTAATTCATAGTGGAACCAAAGAGGGTGAACTGGATAGGTTAACAATAACATTGATAAAATGAAAGGAGTTAGAGTGGGTAGATAAGACCTCTCTGTTACTCAACAACTCTCTCTCTTTACACTTTCAGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCCTATGCCCATTATGGGATAATGGGAAGGCAACAGCCCAATAACAGATGA

mRNA sequence

AAAAATGATAAAATCCAGACGCTTCTTCTTCTTTCTAGAAATCATGCAACGATCTTAAACGCATCTGTGTAAGCTGTTACTTCATCCATTCGGAATCCAAGGTTTGGCCATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAACTGAAGAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATCGATTAGCCGGCATAGTCGAAGATTTAAGCTCCGTGCGAGCGTATCATCCACCATTTCAACGGAGGAATTTGAATTTGCAAGTCCGTTTGAGGTTGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAGGATTTGTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAATTAGTAACAGAGATCTTCCATATGGGTATGGAGAGCCTGATTGTCACTTTTTACTCATCTGCATTCTATTTGATCTTGGCCAGTCTAGTTATAGAGGAATTATGAAGGAAGCTATCACGAATGTAGTTGAACTGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCCTATGCCCATTATGGGATAATGGGAAGGCAACAGCCCAATAACAGATGA

Coding sequence (CDS)

ATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAACTGAAGAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATCGATTAGCCGGCATAGTCGAAGATTTAAGCTCCGTGCGAGCGTATCATCCACCATTTCAACGGAGGAATTTGAATTTGCAAGTCCGTTTGAGGTTGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAGGATTTGTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAATTAGTAACAGAGATCTTCCATATGGGTATGGAGAGCCTGATTGTCACTTTTTACTCATCTGCATTCTATTTGATCTTGGCCAGTCTAGTTATAGAGGAATTATGAAGGAAGCTATCACGAATGTAGTTGAACTGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCCTATGCCCATTATGGGATAATGGGAAGGCAACAGCCCAATAACAGATGA

Protein sequence

MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQPNNR
Homology
[Close]
BLAST of Carg18029 vs. NCBI nr
Match: XP_022933573.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita moschata])

HSP 1 Score: 559.7 bits (1441), Expect = 6.2e-156
Identity = 268/304 (88.16%), Postives = 268/304 (88.16%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYG  
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYG-- 240

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YEVLTENLMDPAHVPYAHYGIMGRQQ
Sbjct: 241 ----------------------------------YEVLTENLMDPAHVPYAHYGIMGRQQ 268

Query: 301 PNNR 305
           PNNR
Sbjct: 301 PNNR 268

[Close]
BLAST of Carg18029 vs. NCBI nr
Match: XP_023531366.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.9 bits (1413), Expect = 1.1e-152
Identity = 263/304 (86.51%), Postives = 265/304 (87.17%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKL KSRFLKQCLQVNLLPSLPSSSISR+SRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQVNLLPSLPSSSISRYSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAE+ERR DERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAESERRVDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKK PPYIPELDDPSYTKLISNRDLPYG  
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKNPPYIPELDDPSYTKLISNRDLPYG-- 240

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YEVLTENLMDPAHVPYAHYGIMGRQQ
Sbjct: 241 ----------------------------------YEVLTENLMDPAHVPYAHYGIMGRQQ 268

Query: 301 PNNR 305
           PNNR
Sbjct: 301 PNNR 268

[Close]
BLAST of Carg18029 vs. NCBI nr
Match: XP_022967161.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita maxima])

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 241/304 (79.28%), Postives = 244/304 (80.26%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKL KSRFLKQCLQVNLLPSLPSS ISRHSRRF LRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQVNLLPSLPSSLISRHSRRFNLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFE+ASPFE E                 YPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEYASPFEDEXXXXXXXXXXXXXXXXXYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFED CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKL SNRDLPYG  
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLTSNRDLPYG-- 240

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YE+LTENLMDPAHVPYAHYGIMG +Q
Sbjct: 241 ----------------------------------YEILTENLMDPAHVPYAHYGIMGMRQ 268

Query: 301 PNNR 305
           PNNR
Sbjct: 301 PNNR 268

[Close]
BLAST of Carg18029 vs. NCBI nr
Match: XP_008451029.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 228/304 (75.00%), Postives = 243/304 (79.93%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MD+LK SS PLHFT K  K +F  QCL++ L PS  SSSI+R + RFKL A  SS IST+
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
             E A+PF+VEAE+E  E ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  --ESANPFQVEAESESGE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAVYPSIVQND+LWFWPNSDPQYKDI+VKKKPPYIPELDDPS+TKLISNRDLPYG  
Sbjct: 181 RACVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYG-- 240

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YE+LTENLMDPAHVPYAHYGIMGRQQ
Sbjct: 241 ----------------------------------YEILTENLMDPAHVPYAHYGIMGRQQ 265

Query: 301 PNNR 305
           P NR
Sbjct: 301 PKNR 265

[Close]
BLAST of Carg18029 vs. NCBI nr
Match: XP_022147615.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Momordica charantia])

HSP 1 Score: 469.9 bits (1208), Expect = 6.4e-129
Identity = 227/303 (74.92%), Postives = 238/303 (78.55%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           M+VLKFSS PLH TAK+ K RF  QC QV+LLPS  S +I RHSRRFKL A+ S TISTE
Sbjct: 8   MEVLKFSSAPLHSTAKVNKYRFRNQCFQVHLLPSTSSLTIHRHSRRFKLCANSSPTISTE 67

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
               A+P EVE E+ERRE ERFDWYAQWYP+MPICDLDKRVPHGK VMGIDVVVWWD+NE
Sbjct: 68  S---ANPLEVEPESERRE-ERFDWYAQWYPVMPICDLDKRVPHGKKVMGIDVVVWWDRNE 127

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+D CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSG CKFIPQAPPDGPPVHTSK
Sbjct: 128 SAWKVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGGCKFIPQAPPDGPPVHTSK 187

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTK + NRDLPYG  
Sbjct: 188 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKSMCNRDLPYG-- 247

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YEVL ENLMDPAHVPYAHYGIMG QQ
Sbjct: 248 ----------------------------------YEVLIENLMDPAHVPYAHYGIMGTQQ 270

Query: 301 PNN 304
           P N
Sbjct: 308 PKN 270

[Close]
BLAST of Carg18029 vs. TAIR10
Match: AT4G25650.2 (ACD1-like)

HSP 1 Score: 341.3 bits (874), Expect = 6.2e-94
Identity = 160/273 (58.61%), Postives = 184/273 (67.40%), Query Frame = 0 

Query: 32  LPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPI 91
           LP  P+S I+R S RF                       EA  E   D +FDWYA WYP+
Sbjct: 31  LPISPNSLITRKSSRFTXXXXXXXXXXXXXXXXXXXXP-EALFEPGSD-KFDWYANWYPV 90

Query: 92  MPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 151
           MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 91  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 150

Query: 152 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILV 211
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++I+WFWPNSDP+YK+I+ 
Sbjct: 151 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 210

Query: 212 KKKPPYIPELDDPSYTKLISNRDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNV 271
             KPPYIPEL+DPS+TKL+ NRD+PYG                                 
Sbjct: 211 TNKPPYIPELEDPSFTKLMGNRDIPYG--------------------------------- 265

Query: 272 VELYEVLTENLMDPAHVPYAHYGIMGRQQPNNR 305
              Y+VL ENLMDPAHVPYAHYG+M   +P  +
Sbjct: 271 ---YDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]
BLAST of Carg18029 vs. TAIR10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 176.4 bits (446), Expect = 2.7e-44
Identity = 108/307 (35.18%), Postives = 151/307 (49.19%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFT-AKLKKSRFL----KQCLQVNLLPSLPSSSISRHSRRFKLRASVSS 60
           M V+  SS     T ++ KK  FL    K  L+V++ PS   S +  +  R     SV +
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPS--RSKLFHNPLRVAAPPSVPT 60

Query: 61  TISTEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVW 120
           + STEE      +  + E E  E   F W   WYP+  + DLD  VP    ++G D+V+W
Sbjct: 61  SDSTEEKRIEEEYGGDKEEEGSE---FKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLW 120

Query: 121 WDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP 180
           +D+N+  W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP 
Sbjct: 121 FDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPE 180

Query: 181 VHT--SKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIP-ELDDPSYTKLISN 240
                S RAC   +P++V   +L+ WP  D    D     +PP +P + D P ++ +   
Sbjct: 181 ARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 240

Query: 241 RDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAH 300
           RDL YG                                    Y+ L EN+ DP+H+ +AH
Sbjct: 241 RDLFYG------------------------------------YDTLMENVSDPSHIDFAH 264

[Close]
BLAST of Carg18029 vs. TAIR10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-27
Identity = 75/248 (30.24%), Postives = 111/248 (44.76%), Query Frame = 0 

Query: 46  RFKLRASVSSTISTEEFEFASPFEVEAENERR-EDERFDWYAQWYPIMPICDLDKRVPHG 105
           R   R++V+ T  +++ E      +  E E+R E   +DW  +WYP+    ++ +  P G
Sbjct: 45  RLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLG 104

Query: 106 KTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCK 165
            TV    +V++ D  E   + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C 
Sbjct: 105 LTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCV 164

Query: 166 FIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDP 225
            IPQ P         K ACV  Y       ++W W ++    K     +K P+      P
Sbjct: 165 KIPQLPAS---AKIPKAACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARP 224

Query: 226 SYTKLISNRDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMD 285
            +  + +  +LPY                                     + +L ENLMD
Sbjct: 225 GFFDISTTHELPYD------------------------------------HSILLENLMD 247

Query: 286 PAHVPYAH 293
           PAHVP +H
Sbjct: 285 PAHVPISH 247

[Close]
BLAST of Carg18029 vs. TAIR10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 72.0 bits (175), Expect = 7.1e-13
Identity = 49/187 (26.20%), Postives = 76/187 (40.64%), Query Frame = 0 

Query: 88  WYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVF----------EDLCPHRLAPL 147
           WYP+    DL             D +V  +  E  W +F           + C HR  PL
Sbjct: 221 WYPVAFTADLKH-----------DTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPL 280

Query: 148 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILW 207
             G +++ GR+QC YHGW ++  G+CK +P             +  +   P + Q  ++W
Sbjct: 281 DLGTVNE-GRIQCPYHGWEYSTDGECKKMPST--------KLLKVKIKSLPCLEQEGMIW 340

Query: 208 FWPNSDPQYKDILVKKKPPYIPELDDPS----YTKLISNRDLPYGYGEPDCHFLLICILF 261
            WP  +P           P +P L  PS    + +L+   DLP  +G      LL+  L 
Sbjct: 341 IWPGDEP---------PAPILPSLQPPSGFLIHAELV--MDLPVEHG------LLLDNLL 370

[Close]
BLAST of Carg18029 vs. Swiss-Prot
Match: sp|Q8W496|PTC52_ARATH (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-92
Identity = 160/273 (58.61%), Postives = 184/273 (67.40%), Query Frame = 0 

Query: 32  LPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPI 91
           LP  P+S I+R S RF                       EA  E   D +FDWYA WYP+
Sbjct: 31  LPISPNSLITRKSSRFTXXXXXXXXXXXXXXXXXXXXP-EALFEPGSD-KFDWYANWYPV 90

Query: 92  MPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 151
           MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 91  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 150

Query: 152 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILV 211
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++I+WFWPNSDP+YK+I+ 
Sbjct: 151 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 210

Query: 212 KKKPPYIPELDDPSYTKLISNRDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNV 271
             KPPYIPEL+DPS+TKL+ NRD+PYG                                 
Sbjct: 211 TNKPPYIPELEDPSFTKLMGNRDIPYG--------------------------------- 265

Query: 272 VELYEVLTENLMDPAHVPYAHYGIMGRQQPNNR 305
              Y+VL ENLMDPAHVPYAHYG+M   +P  +
Sbjct: 271 ---YDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]
BLAST of Carg18029 vs. Swiss-Prot
Match: sp|Q9FYC2|PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.8e-43
Identity = 108/307 (35.18%), Postives = 151/307 (49.19%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFT-AKLKKSRFL----KQCLQVNLLPSLPSSSISRHSRRFKLRASVSS 60
           M V+  SS     T ++ KK  FL    K  L+V++ PS   S +  +  R     SV +
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPS--RSKLFHNPLRVAAPPSVPT 60

Query: 61  TISTEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVW 120
           + STEE      +  + E E  E   F W   WYP+  + DLD  VP    ++G D+V+W
Sbjct: 61  SDSTEEKRIEEEYGGDKEEEGSE---FKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLW 120

Query: 121 WDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP 180
           +D+N+  W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP 
Sbjct: 121 FDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPE 180

Query: 181 VHT--SKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIP-ELDDPSYTKLISN 240
                S RAC   +P++V   +L+ WP  D    D     +PP +P + D P ++ +   
Sbjct: 181 ARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 240

Query: 241 RDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAH 300
           RDL YG                                    Y+ L EN+ DP+H+ +AH
Sbjct: 241 RDLFYG------------------------------------YDTLMENVSDPSHIDFAH 264

[Close]
BLAST of Carg18029 vs. Swiss-Prot
Match: sp|Q9SK50|TIC55_ARATH (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-26
Identity = 75/248 (30.24%), Postives = 111/248 (44.76%), Query Frame = 0 

Query: 46  RFKLRASVSSTISTEEFEFASPFEVEAENERR-EDERFDWYAQWYPIMPICDLDKRVPHG 105
           R   R++V+ T  +++ E      +  E E+R E   +DW  +WYP+    ++ +  P G
Sbjct: 45  RLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLG 104

Query: 106 KTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCK 165
            TV    +V++ D  E   + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C 
Sbjct: 105 LTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCV 164

Query: 166 FIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDP 225
            IPQ P         K ACV  Y       ++W W ++    K     +K P+      P
Sbjct: 165 KIPQLPAS---AKIPKAACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARP 224

Query: 226 SYTKLISNRDLPYGYGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMD 285
            +  + +  +LPY                                     + +L ENLMD
Sbjct: 225 GFFDISTTHELPYD------------------------------------HSILLENLMD 247

Query: 286 PAHVPYAH 293
           PAHVP +H
Sbjct: 285 PAHVPISH 247

[Close]
BLAST of Carg18029 vs. Swiss-Prot
Match: sp|O49931|TIC55_PEA (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.1e-26
Identity = 74/230 (32.17%), Postives = 100/230 (43.48%), Query Frame = 0 

Query: 67  PFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPH----GKTVMGIDVVVWWDKNESA 126
           P   +     RE   +DW  +WYP+     L K VPH    G  V   ++V++ D N+  
Sbjct: 82  PSSEQERKGEREVADYDWTEEWYPLY----LTKNVPHDAPLGLKVYDKNIVLFRDGNDQ- 141

Query: 127 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 186
           ++ +ED CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P D       K A
Sbjct: 142 FQCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPKSA 201

Query: 187 CVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYGEP 246
           CV  Y       +LW W +     K      K P+      P +  + +  +LPY     
Sbjct: 202 CVKTYEVRDSQGVLWVWMSR----KTPPNVSKIPWFENFARPGFQDISTTHELPYD---- 261

Query: 247 DCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAH 293
                                           + +L ENLMDPAHVP +H
Sbjct: 262 --------------------------------HSILLENLMDPAHVPISH 262

[Close]
BLAST of Carg18029 vs. Swiss-Prot
Match: sp|Q9XJ38|CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 63/218 (28.90%), Postives = 89/218 (40.83%), Query Frame = 0 

Query: 88  WYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGR 147
           WYP      L+  +     + G+  V++ D++ SA    +D C HR  PLS G++   G 
Sbjct: 134 WYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEH-SAPTCIKDSCAHRACPLSLGKVIN-GH 193

Query: 148 LQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC----VAVYPSIVQNDILWFWPNSD 207
           +QC YHGW F+GSG C  +P           S R C    VA  P + ++  +W WP   
Sbjct: 194 VQCPYHGWEFDGSGACTKMP-----------STRMCHGVGVAALPCVEKDGFVWVWPGDG 253

Query: 208 PQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYGEPDCHFLLICILFDLGQSSYRGI 267
           P          PP +P    P +T        P GY   D H                  
Sbjct: 254 P----------PPDLP----PDFTA------PPAGY---DVH------------------ 296

Query: 268 MKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQP 302
             E + +V   + +L ENL+D AH P+ H     R  P
Sbjct: 314 -AEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWP 296

[Close]
BLAST of Carg18029 vs. TrEMBL
Match: tr|A0A1S3BQM5|A0A1S3BQM5_CUCME (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492435 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.0e-130
Identity = 228/304 (75.00%), Postives = 243/304 (79.93%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MD+LK SS PLHFT K  K +F  QCL++ L PS  SSSI+R + RFKL A  SS IST+
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
             E A+PF+VEAE+E  E ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  --ESANPFQVEAESESGE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAVYPSIVQND+LWFWPNSDPQYKDI+VKKKPPYIPELDDPS+TKLISNRDLPYG  
Sbjct: 181 RACVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYG-- 240

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YE+LTENLMDPAHVPYAHYGIMGRQQ
Sbjct: 241 ----------------------------------YEILTENLMDPAHVPYAHYGIMGRQQ 265

Query: 301 PNNR 305
           P NR
Sbjct: 301 PKNR 265

[Close]
BLAST of Carg18029 vs. TrEMBL
Match: tr|A0A0A0LZA2|A0A0A0LZA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.2e-126
Identity = 224/304 (73.68%), Postives = 240/304 (78.95%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLK SS PLHFT+K  K +F  QCLQ+ L PS  SSSI+R +  F L A  SSTIST+
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
             E A+PF+V+AE+E  E ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  --ESANPFQVDAESEPGE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240
           RACVAV+PSIVQND+LWFWPNSDPQYKDI+ KKKPPYIPELDDPS+TKLISNRDLPYG  
Sbjct: 181 RACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYG-- 240

Query: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300
                                             YE+LTENLMDPAHVPYAHYGIMGR  
Sbjct: 241 ----------------------------------YEILTENLMDPAHVPYAHYGIMGR-L 264

Query: 301 PNNR 305
           P NR
Sbjct: 301 PKNR 264

[Close]
BLAST of Carg18029 vs. TrEMBL
Match: tr|A0A1S3BQK3|A0A1S3BQK3_CUCME (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492436 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.6e-120
Identity = 215/306 (70.26%), Postives = 235/306 (76.80%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLK SS PLHFT KL KS+F KQC+Q+ L PS   SSI+R +R FKL A   +T STE
Sbjct: 3   MDVLKLSSSPLHFTTKLSKSQFPKQCMQIPLFPSSSFSSINRSNRSFKLCA---TTFSTE 62

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
             E  +PFEVEA++ER    RFDWYAQWYPIMPICDLDKRVP GKTVMGIDVVVWWDKNE
Sbjct: 63  --ETGNPFEVEAQSER----RFDWYAQWYPIMPICDLDKRVPQGKTVMGIDVVVWWDKNE 122

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQ--APPDGPPVHT 180
           S WKVF+DLCPHRLAPLSEGRID+WGRLQCV+HGWCFNGSGDCKFIPQ  APPDGPPVHT
Sbjct: 123 SGWKVFDDLCPHRLAPLSEGRIDEWGRLQCVHHGWCFNGSGDCKFIPQAPAPPDGPPVHT 182

Query: 181 SKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYG 240
           SKRACV+VYPS+VQNDILWFWPNSDPQYKDI+ KK PP+IPELDDPSYTKLI +RDLPYG
Sbjct: 183 SKRACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTPPFIPELDDPSYTKLIISRDLPYG 242

Query: 241 YGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGR 300
                                               YEVLTENLMDPAHVPYAHYGI+ R
Sbjct: 243 ------------------------------------YEVLTENLMDPAHVPYAHYGIVSR 263

Query: 301 QQPNNR 305
           QQ  ++
Sbjct: 303 QQTKHK 263

[Close]
BLAST of Carg18029 vs. TrEMBL
Match: tr|A0A0A0LX68|A0A0A0LX68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600130 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.0e-118
Identity = 212/305 (69.51%), Postives = 230/305 (75.41%), Query Frame = 0 

Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLK SS PLHFT KL KS+  KQC+Q+ L PS   S I+R +R FKL A   +T STE
Sbjct: 1   MDVLKLSSSPLHFTTKLSKSQRPKQCMQILLFPSSSFSLINRPNRGFKLCA---TTFSTE 60

Query: 61  EFEFASPFE-VEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKN 120
             E  +P E VEAE+     ERFDWYAQWYPIMPICDLDKRVPHGK VMGIDVVVWWDKN
Sbjct: 61  --EIGNPLEAVEAES-----ERFDWYAQWYPIMPICDLDKRVPHGKRVMGIDVVVWWDKN 120

Query: 121 ESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180
           ES WKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS
Sbjct: 121 ESGWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 180

Query: 181 KRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGY 240
           KRACV+VYPS+VQNDILWFWPNSDPQYKDI+ KK PPYIPE+DDPSY KLI +RDLPYG 
Sbjct: 181 KRACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTPPYIPEIDDPSYAKLIISRDLPYG- 240

Query: 241 GEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQ 300
                                              YE+LTENLMDPAHVPYAHYG++ RQ
Sbjct: 241 -----------------------------------YEILTENLMDPAHVPYAHYGLIRRQ 259

Query: 301 QPNNR 305
           Q  N+
Sbjct: 301 QTKNK 259

[Close]
BLAST of Carg18029 vs. TrEMBL
Match: tr|M5W8K1|M5W8K1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G005300 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 5.6e-105
Identity = 186/306 (60.78%), Postives = 217/306 (70.92%), Query Frame = 0 

Query: 1   MDVLKFSSVP-LHFTAKLKKSRFLK-QCLQVNLLPSLPSSSISRHSRRFKLRASVSSTIS 60
           M+ LK SS+P L   +K  K++  K      N +PS   S + R+   FK+  + SS++S
Sbjct: 1   MEALKISSIPSLQIPSKFDKAQSKKLTSFCFNSIPSSSFSLVQRNISTFKIFTTTSSSVS 60

Query: 61  TEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDK 120
           TE    A+P E+E EN R + E+FDWYAQWYP+MP+CDLDKRVPH K V+GIDVVVWWD+
Sbjct: 61  TEP---ANPPELEVEN-RTQQEKFDWYAQWYPLMPVCDLDKRVPHAKKVLGIDVVVWWDR 120

Query: 121 NESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHT 180
           NESAWKVF+D CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPP+HT
Sbjct: 121 NESAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPIHT 180

Query: 181 SKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYG 240
           SK+ACVA YPS VQN I+WFWPNSDPQYKD+L +KKPPYIPELDDPSY+ L+ NR++PYG
Sbjct: 181 SKKACVAAYPSTVQNGIVWFWPNSDPQYKDVLAEKKPPYIPELDDPSYSGLMGNREIPYG 240

Query: 241 YGEPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGR 300
                                               YEVL ENLMDPAHVPYAHYGIM  
Sbjct: 241 ------------------------------------YEVLIENLMDPAHVPYAHYGIMRT 266

Query: 301 QQPNNR 305
            QP  +
Sbjct: 301 NQPKEK 266

The following BLAST results are available for this feature:
BLAST of Carg18029 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933573.16.2e-15688.16protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ... [more]
XP_023531366.11.1e-15286.51protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ... [more]
XP_022967161.11.1e-13679.28protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ... [more]
XP_008451029.11.5e-13075.00PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
XP_022147615.16.4e-12974.92protochlorophyllide-dependent translocon component 52, chloroplastic-like [Momor... [more]
BLAST of Carg18029 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25650.26.2e-9458.61ACD1-like[more]
AT3G44880.12.7e-4435.18Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain[more]
AT2G24820.11.0e-2730.24translocon at the inner envelope membrane of chloroplasts 55-II[more]
AT1G44446.17.1e-1326.20Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain[more]
BLAST of Carg18029 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8W496|PTC52_ARATH1.1e-9258.61Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop... [more]
sp|Q9FYC2|PAO_ARATH4.8e-4335.18Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P... [more]
sp|Q9SK50|TIC55_ARATH1.8e-2630.24Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1[more]
sp|O49931|TIC55_PEA9.1e-2632.17Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1[more]
sp|Q9XJ38|CAO_DUNSA2.1e-1428.90Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE... [more]
BLAST of Carg18029 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQM5|A0A1S3BQM5_CUCME1.0e-13075.00protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc... [more]
tr|A0A0A0LZA2|A0A0A0LZA2_CUCSA1.2e-12673.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4 SV=1[more]
tr|A0A1S3BQK3|A0A1S3BQK3_CUCME1.6e-12070.26protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc... [more]
tr|A0A0A0LX68|A0A0A0LX68_CUCSA2.0e-11869.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600130 PE=4 SV=1[more]
tr|M5W8K1|M5W8K1_PRUPE5.6e-10560.78Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G005300 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18029-RACarg18029-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 87..171
e-value: 2.5E-18
score: 65.7
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 88..198
score: 27.555
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3DG3DSA:2.102.10.10coord: 83..220
e-value: 6.3E-36
score: 124.9
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILYSSF50022ISP domaincoord: 77..204
NoneNo IPR availablePANTHERPTHR21266:SF38SUBFAMILY NOT NAMEDcoord: 257..299
coord: 3..239
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 257..299
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 3..239
NoneNo IPR availableCDDcd03480Rieske_RO_Alpha_PaOcoord: 78..209
e-value: 6.18175E-84
score: 250.702