ClCG03G014420 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G014420
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionAccelerated cell death 1
LocationCG_Chr03 : 29308094 .. 29310110 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGAGCATGGACGTTCTGAAACTCTCTTCTACTCCACTTCACTTCACTACACTACCAAACTCAACAAATCCCAATTTCCCAAGCAATGTATACAGACTCCACTATTGCCCTCATCGTCTTCTTCATCGATCTACAGACTCAGTCGAAGATTCAAGCTCTGTGCGAGCACACCAACCACCATTTCAACAGAAGAATCTGCGAATCCGTTCGAGGTGGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAATGGTACCCGGTTATGCCGACTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATAGGGATCGATTTGGTGGTGTGGTGGGATAAGAACGAGAGTTCATGGAAAGTGTTTGAAGATTTGTGTCCGCATAGATTGGCTTCGTTGTCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAATGGTTCTGGTGATTGTAAGTTCATTCCTCAGGCGCCCCCCGACGGCCCTCCGGTACTGATTCTAACCATCTTCCCCCTGTTTCTGTTGACGATTGAACTTTATGGTTGTTTTTGTTTAATATTGAACTTGGATTGTGATTCCATTTTGTCTCTGATGGTGACCTGACGTTGACTATTGAACAAACATTTGTAGAAAATCTGCTTCTAAAGTTATCATTTCCTTTAATGAAAATCAGAAGAATATAACTTTGCTCAATGGATCCATTTCGTATTGGATATTACTGTAATCACACACAATTCTTCTTGAATGCTGAAAGTTGTATGCATAATGATCAGACTATCAATCGATTGGTGGGGAAAGGTTGATTGGAACATACCAAAGTGAGGGGCTGGGGGGAAATTGGTGGTGGGGGAGGAAGATTTGAGGGAGGAGTTACCGGTGGAGGTTGATGAGTTGATGAGATTTGTTGGTAAAAAACCAGGGGTTTAAGCCTCGACGTACTATGATGTTGAAGAAATTCCAGAAACGGTGGATGTTGGAGATGTTGGCGGTTGCTCTGTTCGCAAGGAAGATGGCAAAGAGGCACTTGGTGGCTCTGGTCAATATAGCCAAGCAGAGTACAGAGAGAAAATAGGAGAATATGGAGAAGCTTTTGAAGAACTTACTAAATGATATAACTTAGATTCAGATTCGTACTTTACATTCTATTTCTGTCATTGGTCCATATAATTCTACTGATGAACATTTTTCAGAATACGTTGGCATATTACAATTGAAAGAAGCCACGTAGAAAGTCATAGTCTAAGATAGTTAGAATTGGTTGTGTGGTTAAAACTTTAAATATTTCCCATTTGGACACGGTTTTCTATTTTTCTTCCTGTTATTGCAGGTTCACACATCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATGTTGTGGTTTTGGCCAAATAGTGATCCCCAGTACAAAGATATTATGATGAAGAAAAAACCTCCTTACATCCCCGAATTGGACGATCCATCATATACCAAGTTAATTATTAGCAGAGATCTCCCGTATGGGTATGGAGTGACAATTCGTCAATTTTTTTTTTGTTTTCTGCATTCTATTTAATCTTCGTTAATCTAAAGTATTCTTCCAAGAATAGCAGACAATTTCCCCTTTTTCTTTTTCCACTTAAAGAAGACTGAATCCTCTTTAACAAAAAGGTCATGACCTTCTTCTTCCAAGAATAGTAGAAGAATCAGCTACTTAACCGATCTTCACAATTCAATACTGTTACTGTTAGGTGGATCCCATTGTAAAAAATTGAGCCAAAGAGGGTGAACTTTATTAGTTAACAATAACATTGATGACATGAAAGAAGGAGATCAAGTGCATAGACAAGACCTCGATGTTTACTCAACTACTCTGTCTTTTTGCACTTTCAGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCGCATTATGGGATAATGGGAAGCCAACAGCCCAAGAACAGATGA

mRNA sequence

TTCGAGCATGGACGTTCTGAAACTCTCTTCTACTCCACTTCACTTCACTACACTACCAAACTCAACAAATCCCAATTTCCCAAGCAATGTATACAGACTCCACTATTGCCCTCATCGTCTTCTTCATCGATCTACAGACTCAGTCGAAGATTCAAGCTCTGTGCGAGCACACCAACCACCATTTCAACAGAAGAATCTGCGAATCCGTTCGAGGTGGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAATGGTACCCGGTTATGCCGACTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATAGGGATCGATTTGGTGGTGTGGTGGGATAAGAACGAGAGTTCATGGAAAGTGTTTGAAGATTTGTGTCCGCATAGATTGGCTTCGTTGTCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAATGGTTCTGGTGATTGTAAGTTCATTCCTCAGGCGCCCCCCGACGGCCCTCCGGTTCACACATCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATGTTGTGGTTTTGGCCAAATAGTGATCCCCAGTACAAAGATATTATGATGAAGAAAAAACCTCCTTACATCCCCGAATTGGACGATCCATCATATACCAAGTTAATTATTAGCAGAGATCTCCCGTATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCGCATTATGGGATAATGGGAAGCCAACAGCCCAAGAACAGATGA

Coding sequence (CDS)

TTCGAGCATGGACGTTCTGAAACTCTCTTCTACTCCACTTCACTTCACTACACTACCAAACTCAACAAATCCCAATTTCCCAAGCAATGTATACAGACTCCACTATTGCCCTCATCGTCTTCTTCATCGATCTACAGACTCAGTCGAAGATTCAAGCTCTGTGCGAGCACACCAACCACCATTTCAACAGAAGAATCTGCGAATCCGTTCGAGGTGGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAATGGTACCCGGTTATGCCGACTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATAGGGATCGATTTGGTGGTGTGGTGGGATAAGAACGAGAGTTCATGGAAAGTGTTTGAAGATTTGTGTCCGCATAGATTGGCTTCGTTGTCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAATGGTTCTGGTGATTGTAAGTTCATTCCTCAGGCGCCCCCCGACGGCCCTCCGGTTCACACATCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATGTTGTGGTTTTGGCCAAATAGTGATCCCCAGTACAAAGATATTATGATGAAGAAAAAACCTCCTTACATCCCCGAATTGGACGATCCATCATATACCAAGTTAATTATTAGCAGAGATCTCCCGTATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCGCATTATGGGATAATGGGAAGCCAACAGCCCAAGAACAGATGA

Protein sequence

FEHGRSETLFYSTSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFEVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGSQQPKNR
Homology
[Close]
BLAST of ClCG03G014420 vs. Swiss-Prot
Match: PTC52_ARATH (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.5e-101
Identity = 165/237 (69.62%), Postives = 190/237 (80.17%), Query Frame = 1 

Query: 34  PLLPSSSSSSIYRLSRRFKLCASTPTTISTEESAN-PFEVEAESERREERFDWYAQWYPV 93
           P LP S +S I R S RF    S+P + S   S N P E EA  E   ++FDWYA WYPV
Sbjct: 29  PSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPV 88

Query: 94  MPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLASLSEGRIDQWGRLQCV 153
           MP CDLDK+VPHGK V+GIDLVVWWD+NE  WKV +D CPHRLA LS+GRIDQWGRLQCV
Sbjct: 89  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 148

Query: 154 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPQYKDIMM 213
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++++WFWPNSDP+YK+I+ 
Sbjct: 149 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 208

Query: 214 KKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGSQQPKNR 270
             KPPYIPEL+DPS+TKL+ +RD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 209 TNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]
BLAST of ClCG03G014420 vs. Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-48
Identity = 107/263 (40.68%), Postives = 138/263 (52.47%), Query Frame = 1 

Query: 6   SETLFYSTSLHYTTKLNKS-QFPKQCIQTPLLPS--SSSSSIYRLSRRFKLCASTPTTIS 65
           S  L  STS   T   +K   F     + PL  S   S S ++    R     S PT+ S
Sbjct: 2   SVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDS 61

Query: 66  TEESANPFEVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNES 125
           TEE     E   + E     F W   WYPV    DLD  VP    ++G DLV+W+D+N+ 
Sbjct: 62  TEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQ 121

Query: 126 SWKVFEDLCPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHT--S 185
            W  F+DLCPHRLA LSEGR+D+ G LQC YHGW F G G C  IPQA   GP      S
Sbjct: 122 KWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKS 181

Query: 186 KRACVAVYPSIVQNDMLWFWPNSDPQYKDIMMKKKPPYIP-ELDDPSYTKLIISRDLPYG 245
            RAC   +P++V   +L+ WP  D    D     +PP +P + D P ++ + I RDL YG
Sbjct: 182 PRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYG 241

Query: 246 YEVLTENLMDPAHVPYAHYGIMG 263
           Y+ L EN+ DP+H+ +AH+ + G
Sbjct: 242 YDTLMENVSDPSHIDFAHHKVTG 262

[Close]
BLAST of ClCG03G014420 vs. Swiss-Prot
Match: TIC55_PEA (Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30
Identity = 73/193 (37.82%), Postives = 101/193 (52.33%), Query Frame = 1 

Query: 71  EVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDL 130
           E E + ER    +DW  +WYP+  T ++    P G  V   ++V++ D N+  ++ +ED 
Sbjct: 85  EQERKGEREVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQ-FQCYEDR 144

Query: 131 CPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPS 190
           CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P D       K ACV  Y  
Sbjct: 145 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAK---IPKSACVKTYEV 204

Query: 191 IVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELD------DPSYTKLIISRDLPYGYEVLT 250
                +LW W          M +K PP + ++        P +  +  + +LPY + +L 
Sbjct: 205 RDSQGVLWVW----------MSRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILL 262

Query: 251 ENLMDPAHVPYAH 258
           ENLMDPAHVP +H
Sbjct: 265 ENLMDPAHVPISH 262

[Close]
BLAST of ClCG03G014420 vs. Swiss-Prot
Match: TIC55_ARATH (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30
Identity = 80/231 (34.63%), Postives = 116/231 (50.22%), Query Frame = 1 

Query: 33  TPLLPSSSSSSIYRLSRRFKLC---ASTPTTISTE-ESANPFEVEAESERREE--RFDWY 92
           TP++ +  S+       R +L    A   T +S + E      +  E E+R E   +DW 
Sbjct: 26  TPIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWT 85

Query: 93  AQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLASLSEGRIDQW 152
            +WYP+  T ++ +  P G TV    +V++ D  E + + +ED CPHRLA LSEG++   
Sbjct: 86  EEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID- 145

Query: 153 GRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPQ 212
           GRL+C+YHGW F G G C  IPQ P         K ACV  Y       ++W W ++   
Sbjct: 146 GRLECLYHGWQFEGEGKCVKIPQLPASAK---IPKAACVKTYEVKDSQGVVWVWMST--- 205

Query: 213 YKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAH 258
            K     +K P+      P +  +  + +LPY + +L ENLMDPAHVP +H
Sbjct: 206 -KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISH 247

[Close]
BLAST of ClCG03G014420 vs. Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13
Identity = 55/181 (30.39%), Postives = 79/181 (43.65%), Query Frame = 1 

Query: 89  WYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLASLSEGRIDQWGR 148
           WYP      L+  +     + G+  V++ D++ S+    +D C HR   LS G++   G 
Sbjct: 134 WYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEH-SAPTCIKDSCAHRACPLSLGKVIN-GH 193

Query: 149 LQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRAC----VAVYPSIVQNDMLWFWPNSD 208
           +QC YHGW F+GSG C  +P           S R C    VA  P + ++  +W WP   
Sbjct: 194 VQCPYHGWEFDGSGACTKMP-----------STRMCHGVGVAALPCVEKDGFVWVWPGDG 253

Query: 209 PQYKDIMMKKKPPYIPELDDPSYT--------KLIISRDLPYGYEVLTENLMDPAHVPYA 258
           P          PP +P    P +T           I  D+P  + +L ENL+D AH P+ 
Sbjct: 254 P----------PPDLP----PDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFT 287

[Close]
BLAST of ClCG03G014420 vs. TrEMBL
Match: M5W8K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004005mg PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.4e-106
Identity = 177/259 (68.34%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 14  SLHYTTKLNKSQFPKQ---CIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPF 73
           SL   +K +K+Q  K    C  +  +PSSS S + R    FK+  +T +++STE  ANP 
Sbjct: 11  SLQIPSKFDKAQSKKLTSFCFNS--IPSSSFSLVQRNISTFKIFTTTSSSVSTEP-ANPP 70

Query: 74  EVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDL 133
           E+E E+  ++E+FDWYAQWYP+MP CDLDKRVPH K V+GID+VVWWD+NES+WKVF+D 
Sbjct: 71  ELEVENRTQQEKFDWYAQWYPLMPVCDLDKRVPHAKKVLGIDVVVWWDRNESAWKVFDDS 130

Query: 134 CPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPS 193
           CPHRLA LSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPP+HTSK+ACVA YPS
Sbjct: 131 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPIHTSKKACVAAYPS 190

Query: 194 IVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDP 253
            VQN ++WFWPNSDPQYKD++ +KKPPYIPELDDPSY+ L+ +R++PYGYEVL ENLMDP
Sbjct: 191 TVQNGIVWFWPNSDPQYKDVLAEKKPPYIPELDDPSYSGLMGNREIPYGYEVLIENLMDP 250

Query: 254 AHVPYAHYGIMGSQQPKNR 270
           AHVPYAHYGIM + QPK +
Sbjct: 251 AHVPYAHYGIMRTNQPKEK 266

[Close]
BLAST of ClCG03G014420 vs. TrEMBL
Match: W9SBE7_9ROSA (Protochlorophyllide-dependent translocon component 52 OS=Morus notabilis GN=L484_019086 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102
Identity = 173/252 (68.65%), Postives = 205/252 (81.35%), Query Frame = 1 

Query: 22  NKSQFPKQCIQT--PLLPSSSSSSIYRLSR--RFKLCASTPTTISTEESANPFEVEAESE 81
           NK+QF K       P LP+SS  S +R     RF+L  +  +++ST+ S +P + E  +E
Sbjct: 20  NKTQFRKLISSNVNPFLPTSSFCSDHRQRNPSRFELFTTISSSVSTDLS-DPPQPEVRTE 79

Query: 82  RREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLAS 141
               +FDWY+QWYPVMP CDLDKRVPHGK VIG+D+VVWWD+NES WKVF+D CPHRLA 
Sbjct: 80  TPGGKFDWYSQWYPVMPVCDLDKRVPHGKKVIGLDVVVWWDRNESDWKVFDDSCPHRLAP 139

Query: 142 LSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDML 201
           LSEGRIDQWGRLQCVYHGWCFNGSGDC FIPQAPPDGPPVHT K+AC A+YPS VQN ++
Sbjct: 140 LSEGRIDQWGRLQCVYHGWCFNGSGDCNFIPQAPPDGPPVHTFKKACAAIYPSTVQNGIV 199

Query: 202 WFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAH 261
           WFWPN+DPQYKDI+MKKKPPYI E+DDPS+TKL+ +RD+PYGYEVL ENLMDPAHVPYAH
Sbjct: 200 WFWPNTDPQYKDILMKKKPPYISEIDDPSFTKLMGNRDIPYGYEVLIENLMDPAHVPYAH 259

Query: 262 YGIMGSQQPKNR 270
           YGIM + Q K++
Sbjct: 260 YGIMRTPQRKSK 270

[Close]
BLAST of ClCG03G014420 vs. TrEMBL
Match: A0A0D2P555_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G016400 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.8e-102
Identity = 178/266 (66.92%), Postives = 208/266 (78.20%), Query Frame = 1 

Query: 6   SETLFYSTSLHYTTKLNKSQFPKQC-----IQTPLLPSSSSSSIYRLSRRFKLCASTPTT 65
           S T+ YS  +  TT+ NK+QF K       +Q P    + S S     R F   +S+P  
Sbjct: 7   SPTIVYSPYIPTTTR-NKTQFSKPIFHNLNLQLPCFTRNGSKS-----RLFTTLSSSP-- 66

Query: 66  ISTEESANPFEVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKN 125
           IST ES  P   E E+E  +ERFDWY+QWYPVMP CDLDKRVPHGK V+G+DLVVWWDKN
Sbjct: 67  ISTTESIEPPMPEVEAEVGKERFDWYSQWYPVMPVCDLDKRVPHGKKVLGLDLVVWWDKN 126

Query: 126 ESSWKVFEDLCPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTS 185
           E+ WKVF+D CPHRLA LSEGRIDQWGRLQCVYHGWCF G+GDCK IPQAP DGPPVHT 
Sbjct: 127 ENEWKVFDDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFGGNGDCKIIPQAPLDGPPVHTF 186

Query: 186 KRACVAVYPSIVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGY 245
           K+ACVAVYPS+VQ+D++W WPN+DPQYKDI+ KKKPPYIP LDDPS++KL+ +RD+PYGY
Sbjct: 187 KKACVAVYPSVVQHDIVWVWPNADPQYKDIITKKKPPYIPVLDDPSFSKLMGNRDIPYGY 246

Query: 246 EVLTENLMDPAHVPYAHYGIMGSQQP 267
           EVL ENLMDPAHVPYAHYGIM ++ P
Sbjct: 247 EVLVENLMDPAHVPYAHYGIMRTRTP 264

[Close]
BLAST of ClCG03G014420 vs. TrEMBL
Match: A0A0B0NPL7_GOSAR (Protochlorophyllide-dependent translocon component 52, chloroplastic-like protein OS=Gossypium arboreum GN=F383_23014 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.0e-101
Identity = 173/261 (66.28%), Postives = 205/261 (78.54%), Query Frame = 1 

Query: 6   SETLFYSTSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEE 65
           S T+ +S  +  TT+ NK+QF K       L     +     SR F   +S+P  IST E
Sbjct: 7   SPTIVHSPYIPTTTR-NKTQFAKPIFHNLNLQLPCYTRNGSKSRLFTTLSSSP--ISTTE 66

Query: 66  SANPFEVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWK 125
           S  P   E E+E  +ERFDWY+QWYPVMP CDLDKRVPHGK V+G+DLVVWWDKNE+ WK
Sbjct: 67  SIEPPMPEVEAEVGKERFDWYSQWYPVMPVCDLDKRVPHGKKVLGLDLVVWWDKNENEWK 126

Query: 126 VFEDLCPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACV 185
           VF+D CPHRLA LSEGRIDQWGRLQCVYHGWCF G+GDCK IPQAP DGPPVHT K+ACV
Sbjct: 127 VFDDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFGGNGDCKIIPQAPVDGPPVHTFKKACV 186

Query: 186 AVYPSIVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTE 245
           AVYPS+VQ+D++W WPN+DPQY+DI+ KKKPPYIP LDDPS++KL+ +RD+PYGYEVL E
Sbjct: 187 AVYPSVVQHDIVWVWPNADPQYRDIITKKKPPYIPVLDDPSFSKLMGNRDIPYGYEVLVE 246

Query: 246 NLMDPAHVPYAHYGIMGSQQP 267
           NLMDPAHVPYAHYG+M ++ P
Sbjct: 247 NLMDPAHVPYAHYGLMRTRTP 264

[Close]
BLAST of ClCG03G014420 vs. TrEMBL
Match: A0A061GR37_THECC (ACD1-like OS=Theobroma cacao GN=TCM_040033 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-100
Identity = 165/250 (66.00%), Postives = 200/250 (80.00%), Query Frame = 1 

Query: 18  TTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFEVEAESE 77
           T  +N SQF K      L       ++  +S+ F   +S+P   ++ ES +P + E E++
Sbjct: 18  TATINNSQFTKPLFLNFLFKPLHHRNV-SISKLFTTLSSSP---ASTESVDPPQPEVEAD 77

Query: 78  RREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLAS 137
               +FDWYAQWYPVMP CDLDKRVPH K V+G+DLVVWWD+NE+ WKVF+D CPHRLA 
Sbjct: 78  SELGKFDWYAQWYPVMPVCDLDKRVPHAKKVLGLDLVVWWDRNENEWKVFDDTCPHRLAP 137

Query: 138 LSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDML 197
           LSEGRIDQWGRLQCVYHGWCF G+GDCKFIPQA PDGPPVHT K+ACVA YPS VQ+D+L
Sbjct: 138 LSEGRIDQWGRLQCVYHGWCFGGAGDCKFIPQAAPDGPPVHTFKKACVAAYPSTVQHDIL 197

Query: 198 WFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAH 257
           WFWPN+DP+YKDI+MKKKPPY+PEL+DPS++KL+ +RD+PYGYEVL ENLMDPAHVPYAH
Sbjct: 198 WFWPNADPEYKDIIMKKKPPYLPELEDPSFSKLMANRDIPYGYEVLVENLMDPAHVPYAH 257

Query: 258 YGIMGSQQPK 268
           YGIM ++ PK
Sbjct: 258 YGIMQTRSPK 263

[Close]
BLAST of ClCG03G014420 vs. TAIR10
Match: AT4G25650.2 (AT4G25650.2 ACD1-like)

HSP 1 Score: 370.5 bits (950), Expect = 8.5e-103
Identity = 165/237 (69.62%), Postives = 190/237 (80.17%), Query Frame = 1 

Query: 34  PLLPSSSSSSIYRLSRRFKLCASTPTTISTEESAN-PFEVEAESERREERFDWYAQWYPV 93
           P LP S +S I R S RF    S+P + S   S N P E EA  E   ++FDWYA WYPV
Sbjct: 29  PSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPV 88

Query: 94  MPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLASLSEGRIDQWGRLQCV 153
           MP CDLDK+VPHGK V+GIDLVVWWD+NE  WKV +D CPHRLA LS+GRIDQWGRLQCV
Sbjct: 89  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 148

Query: 154 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPQYKDIMM 213
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++++WFWPNSDP+YK+I+ 
Sbjct: 149 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 208

Query: 214 KKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGSQQPKNR 270
             KPPYIPEL+DPS+TKL+ +RD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 209 TNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]
BLAST of ClCG03G014420 vs. TAIR10
Match: AT3G44880.1 (AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-49
Identity = 107/263 (40.68%), Postives = 138/263 (52.47%), Query Frame = 1 

Query: 6   SETLFYSTSLHYTTKLNKS-QFPKQCIQTPLLPS--SSSSSIYRLSRRFKLCASTPTTIS 65
           S  L  STS   T   +K   F     + PL  S   S S ++    R     S PT+ S
Sbjct: 2   SVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDS 61

Query: 66  TEESANPFEVEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNES 125
           TEE     E   + E     F W   WYPV    DLD  VP    ++G DLV+W+D+N+ 
Sbjct: 62  TEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQ 121

Query: 126 SWKVFEDLCPHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHT--S 185
            W  F+DLCPHRLA LSEGR+D+ G LQC YHGW F G G C  IPQA   GP      S
Sbjct: 122 KWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKS 181

Query: 186 KRACVAVYPSIVQNDMLWFWPNSDPQYKDIMMKKKPPYIP-ELDDPSYTKLIISRDLPYG 245
            RAC   +P++V   +L+ WP  D    D     +PP +P + D P ++ + I RDL YG
Sbjct: 182 PRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYG 241

Query: 246 YEVLTENLMDPAHVPYAHYGIMG 263
           Y+ L EN+ DP+H+ +AH+ + G
Sbjct: 242 YDTLMENVSDPSHIDFAHHKVTG 262

[Close]
BLAST of ClCG03G014420 vs. TAIR10
Match: AT2G24820.1 (AT2G24820.1 translocon at the inner envelope membrane of chloroplasts 55-II)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-31
Identity = 80/231 (34.63%), Postives = 116/231 (50.22%), Query Frame = 1 

Query: 33  TPLLPSSSSSSIYRLSRRFKLC---ASTPTTISTE-ESANPFEVEAESERREE--RFDWY 92
           TP++ +  S+       R +L    A   T +S + E      +  E E+R E   +DW 
Sbjct: 26  TPIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWT 85

Query: 93  AQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLCPHRLASLSEGRIDQW 152
            +WYP+  T ++ +  P G TV    +V++ D  E + + +ED CPHRLA LSEG++   
Sbjct: 86  EEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID- 145

Query: 153 GRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDMLWFWPNSDPQ 212
           GRL+C+YHGW F G G C  IPQ P         K ACV  Y       ++W W ++   
Sbjct: 146 GRLECLYHGWQFEGEGKCVKIPQLPASAK---IPKAACVKTYEVKDSQGVVWVWMST--- 205

Query: 213 YKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAH 258
            K     +K P+      P +  +  + +LPY + +L ENLMDPAHVP +H
Sbjct: 206 -KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISH 247

[Close]
BLAST of ClCG03G014420 vs. NCBI nr
Match: gi|659100308|ref|XP_008451029.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 491.5 bits (1264), Expect = 9.4e-136
Identity = 220/258 (85.27%), Postives = 239/258 (92.64%), Query Frame = 1 

Query: 12  STSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFE 71
           S+ LH+T K +K QFP QC++ PL PSSSSSSI R + RFKLCA T + IST+ESANPF+
Sbjct: 8   SSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQESANPFQ 67

Query: 72  VEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLC 131
           VEAESE  EERFDWYAQWYP+MP CDLDKRVPHGKTV+GID+VVWWDKNES+WKVF+DLC
Sbjct: 68  VEAESESGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLC 127

Query: 132 PHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSI 191
           PHRLA LSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSI
Sbjct: 128 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSI 187

Query: 192 VQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPA 251
           VQND+LWFWPNSDPQYKDIM+KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPA
Sbjct: 188 VQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPA 247

Query: 252 HVPYAHYGIMGSQQPKNR 270
           HVPYAHYGIMG QQPKNR
Sbjct: 248 HVPYAHYGIMGRQQPKNR 265

[Close]
BLAST of ClCG03G014420 vs. NCBI nr
Match: gi|778663338|ref|XP_004144087.2| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 2.8e-132
Identity = 217/258 (84.11%), Postives = 237/258 (91.86%), Query Frame = 1 

Query: 12  STSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFE 71
           S+ LH+T+K NK QFP QC+Q PL PSSSSSSI R +  F LCA T +TIST+ESANPF+
Sbjct: 8   SSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQESANPFQ 67

Query: 72  VEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLC 131
           V+AESE  EERFDWYAQWYP+MP CDLDKRVPHGKTV+GID+VVWWDKNES+WKVF+DLC
Sbjct: 68  VDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLC 127

Query: 132 PHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSI 191
           PHRLA LSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAV+PSI
Sbjct: 128 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSI 187

Query: 192 VQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPA 251
           VQND+LWFWPNSDPQYKDIM KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPA
Sbjct: 188 VQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPA 247

Query: 252 HVPYAHYGIMGSQQPKNR 270
           HVPYAHYGIMG + PKNR
Sbjct: 248 HVPYAHYGIMG-RLPKNR 264

[Close]
BLAST of ClCG03G014420 vs. NCBI nr
Match: gi|700211278|gb|KGN66374.1| (hypothetical protein Csa_1G600140 [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 2.8e-132
Identity = 217/258 (84.11%), Postives = 237/258 (91.86%), Query Frame = 1 

Query: 12  STSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFE 71
           S+ LH+T+K NK QFP QC+Q PL PSSSSSSI R +  F LCA T +TIST+ESANPF+
Sbjct: 8   SSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQESANPFQ 67

Query: 72  VEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLC 131
           V+AESE  EERFDWYAQWYP+MP CDLDKRVPHGKTV+GID+VVWWDKNES+WKVF+DLC
Sbjct: 68  VDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLC 127

Query: 132 PHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSI 191
           PHRLA LSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAV+PSI
Sbjct: 128 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSI 187

Query: 192 VQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPA 251
           VQND+LWFWPNSDPQYKDIM KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPA
Sbjct: 188 VQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPA 247

Query: 252 HVPYAHYGIMGSQQPKNR 270
           HVPYAHYGIMG + PKNR
Sbjct: 248 HVPYAHYGIMG-RLPKNR 264

[Close]
BLAST of ClCG03G014420 vs. NCBI nr
Match: gi|659100312|ref|XP_008451031.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 464.2 bits (1193), Expect = 1.6e-127
Identity = 214/260 (82.31%), Postives = 234/260 (90.00%), Query Frame = 1 

Query: 12  STSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFE 71
           S+ LH+TTKL+KSQFPKQC+Q PL PSSS SSI R +R FKLCA   TT STEE+ NPFE
Sbjct: 10  SSPLHFTTKLSKSQFPKQCMQIPLFPSSSFSSINRSNRSFKLCA---TTFSTEETGNPFE 69

Query: 72  VEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLC 131
           VEA+SERR   FDWYAQWYP+MP CDLDKRVP GKTV+GID+VVWWDKNES WKVF+DLC
Sbjct: 70  VEAQSERR---FDWYAQWYPIMPICDLDKRVPQGKTVMGIDVVVWWDKNESGWKVFDDLC 129

Query: 132 PHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQ--APPDGPPVHTSKRACVAVYP 191
           PHRLA LSEGRID+WGRLQCV+HGWCFNGSGDCKFIPQ  APPDGPPVHTSKRACV+VYP
Sbjct: 130 PHRLAPLSEGRIDEWGRLQCVHHGWCFNGSGDCKFIPQAPAPPDGPPVHTSKRACVSVYP 189

Query: 192 SIVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMD 251
           S+VQND+LWFWPNSDPQYKDIM KK PP+IPELDDPSYTKLIISRDLPYGYEVLTENLMD
Sbjct: 190 SVVQNDILWFWPNSDPQYKDIMAKKTPPFIPELDDPSYTKLIISRDLPYGYEVLTENLMD 249

Query: 252 PAHVPYAHYGIMGSQQPKNR 270
           PAHVPYAHYGI+  QQ K++
Sbjct: 250 PAHVPYAHYGIVSRQQTKHK 263

[Close]
BLAST of ClCG03G014420 vs. NCBI nr
Match: gi|659100310|ref|XP_008451030.1| (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 464.2 bits (1193), Expect = 1.6e-127
Identity = 214/260 (82.31%), Postives = 234/260 (90.00%), Query Frame = 1 

Query: 12  STSLHYTTKLNKSQFPKQCIQTPLLPSSSSSSIYRLSRRFKLCASTPTTISTEESANPFE 71
           S+ LH+TTKL+KSQFPKQC+Q PL PSSS SSI R +R FKLCA   TT STEE+ NPFE
Sbjct: 10  SSPLHFTTKLSKSQFPKQCMQIPLFPSSSFSSINRSNRSFKLCA---TTFSTEETGNPFE 69

Query: 72  VEAESERREERFDWYAQWYPVMPTCDLDKRVPHGKTVIGIDLVVWWDKNESSWKVFEDLC 131
           VEA+SERR   FDWYAQWYP+MP CDLDKRVP GKTV+GID+VVWWDKNES WKVF+DLC
Sbjct: 70  VEAQSERR---FDWYAQWYPIMPICDLDKRVPQGKTVMGIDVVVWWDKNESGWKVFDDLC 129

Query: 132 PHRLASLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQ--APPDGPPVHTSKRACVAVYP 191
           PHRLA LSEGRID+WGRLQCV+HGWCFNGSGDCKFIPQ  APPDGPPVHTSKRACV+VYP
Sbjct: 130 PHRLAPLSEGRIDEWGRLQCVHHGWCFNGSGDCKFIPQAPAPPDGPPVHTSKRACVSVYP 189

Query: 192 SIVQNDMLWFWPNSDPQYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMD 251
           S+VQND+LWFWPNSDPQYKDIM KK PP+IPELDDPSYTKLIISRDLPYGYEVLTENLMD
Sbjct: 190 SVVQNDILWFWPNSDPQYKDIMAKKTPPFIPELDDPSYTKLIISRDLPYGYEVLTENLMD 249

Query: 252 PAHVPYAHYGIMGSQQPKNR 270
           PAHVPYAHYGI+  QQ K++
Sbjct: 250 PAHVPYAHYGIVSRQQTKHK 263

The following BLAST results are available for this feature:
BLAST of ClCG03G014420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTC52_ARATH1.5e-10169.62Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop... [more]
PAO_ARATH2.5e-4840.68Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1[more]
TIC55_PEA1.4e-3037.82Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1[more]
TIC55_ARATH3.1e-3034.63Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=1 SV=1[more]
CAO_DUNSA3.4e-1330.39Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1[more]
BLAST of ClCG03G014420 vs. TrEMBL
Match NameE-valueIdentityDescription
M5W8K1_PRUPE1.4e-10668.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004005mg PE=4 SV=1[more]
W9SBE7_9ROSA1.6e-10268.65Protochlorophyllide-dependent translocon component 52 OS=Morus notabilis GN=L484... [more]
A0A0D2P555_GOSRA2.8e-10266.92Uncharacterized protein OS=Gossypium raimondii GN=B456_004G016400 PE=4 SV=1[more]
A0A0B0NPL7_GOSAR4.0e-10166.28Protochlorophyllide-dependent translocon component 52, chloroplastic-like protei... [more]
A0A061GR37_THECC1.5e-10066.00ACD1-like OS=Theobroma cacao GN=TCM_040033 PE=4 SV=1[more]
BLAST of ClCG03G014420 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25650.28.5e-10369.62 ACD1-like[more]
AT3G44880.11.4e-4940.68 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain[more]
AT2G24820.11.7e-3134.63 translocon at the inner envelope membrane of chloroplasts 55-II[more]
BLAST of ClCG03G014420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100308|ref|XP_008451029.1|9.4e-13685.27PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
gi|778663338|ref|XP_004144087.2|2.8e-13284.11PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
gi|700211278|gb|KGN66374.1|2.8e-13284.11hypothetical protein Csa_1G600140 [Cucumis sativus][more]
gi|659100312|ref|XP_008451031.1|1.6e-12782.31PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
gi|659100310|ref|XP_008451030.1|1.6e-12782.31PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G014420.1ClCG03G014420.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3DG3DSA:2.102.10.10coord: 88..206
score: 3.7
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 88..172
score: 5.9
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 89..199
score: 27
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 73..205
score: 1.02
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 1..269
score: 5.5E
NoneNo IPR availablePANTHERPTHR21266:SF25PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT 52, CHLOROPLASTICcoord: 1..269
score: 5.5E
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 195..264
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G014420Csa1G600130Cucumber (Chinese Long) v2cuwcgB045
ClCG03G014420MELO3C015590Melon (DHL92) v3.5.1mewcgB243
ClCG03G014420Cla011097Watermelon (97103) v1wcgwmB224
ClCG03G014420Cla97C03G064630Watermelon (97103) v2wcgwmbB186
ClCG03G014420Bhi02G001440Wax gourdwcgwgoB362
ClCG03G014420CSPI01G29360Wild cucumber (PI 183967)cpiwcgB049
ClCG03G014420Cucsa.142410Cucumber (Gy14) v1cgywcgB242
ClCG03G014420CmaCh10G010010Cucurbita maxima (Rimu)cmawcgB054
ClCG03G014420CmaCh11G007890Cucurbita maxima (Rimu)cmawcgB113
ClCG03G014420CmoCh11G007940Cucurbita moschata (Rifu)cmowcgB101
ClCG03G014420CmoCh10G010570Cucurbita moschata (Rifu)cmowcgB045
ClCG03G014420Cp4.1LG04g11680Cucurbita pepo (Zucchini)cpewcgB599
ClCG03G014420Cp4.1LG05g08640Cucurbita pepo (Zucchini)cpewcgB672
ClCG03G014420CsGy1G028630Cucumber (Gy14) v2cgybwcgB043
ClCG03G014420MELO3C029304.2Melon (DHL92) v3.6.1medwcgB235
ClCG03G014420Carg18029Silver-seed gourdcarwcgB0165
ClCG03G014420Carg06127Silver-seed gourdcarwcgB0024
ClCG03G014420CsaV3_1G041770Cucumber (Chinese Long) v3cucwcgB050
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG03G014420Wild cucumber (PI 183967)cpiwcgB048
ClCG03G014420Cucumber (Chinese Long) v2cuwcgB046
ClCG03G014420Melon (DHL92) v3.5.1mewcgB245
ClCG03G014420Cucurbita pepo (Zucchini)cpewcgB327
ClCG03G014420Bottle gourd (USVL1VR-Ls)lsiwcgB364
ClCG03G014420Cucumber (Gy14) v2cgybwcgB042
ClCG03G014420Melon (DHL92) v3.6.1medwcgB237
ClCG03G014420Cucumber (Chinese Long) v3cucwcgB048