CmaCh09G006700 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTACAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAGTAAGAAGAGTTTATGTTGTTAATCTTGTGAATTTTCATCGTCAATGCGTTAATATTGATATCTCTGTTTCGGTTTTTGTGCAATTTTGTTTGAATTTTGTGAGTAGATCATGTGTCTGATGTAGTGGATGGCTCTTAATTTCTTGCCACCAACGATTTCATCTATGAAATATGAAATGCTAAGCAATTCAGAAATATTGTGAGTGGGAGAAGAAACCAAATCTTACGTAATTGGAGACAAGAAATTAGTATTATTAGGAAATTCATGCTTGTAGGTCATTTAATGTCAATTTAGCAAATGGTGATGTGAAACTGCTGAAGCTAAGTCCGATGAATCATGTGTATTTTTTAGCCTGTGCATTGACATGGGGAAGCTATCCTTAGTTCTAGGTTTGAACTTTTTCAAATCATGCTCGTATGCATCTTGTGGCAATCAAGACGAAGAAGAAATCAAGGTGATTTGGTTGGTTTGAGAAGATATTGTGTTCGTGTTTGTTTTTAAAATAAGAAACTGTTATTAGTTTCTGTTAGGGGTCAGATCACTCCAACTATATTTAGTATCATTAATGTAAAAATCTTAGTATGAATCATTCTCAGATGCATTATTTTTTTGGGTAAAATTCTTAGATGTTGGTAGTTAAGGGTAACGAAAGCTATGGAAAATAAGGACGATGGTGGTGAGAGGTTTTCACACCCTTACAAATAAACGCGCATTTGCTAGGGAGAAGTTGTCACACCCTTATAAAGAATATTTCATTCTCTTCCCCAACTGACGTGGGATCTTATAGTGATAATCAAAATTTTGTTTTCTATTATTCAAATATGATAATATTGGCTGCTAGTACTATTCCCAACCATTGTTTTTTGCTGGGTTTGTTGGTTTATAGAGGTTGTTTGGTTGAAATGGTTCAATTTTCAAAATTTATTGTACTCTTGTGTCTCTCCAGTCGGTTCAATGTTGATGTTCATCTACCAAACTGACTATAGTGAAAATTGTGCTGCAGCTGATGTCTGCACTTGTCATTTTGTTTACCTGCTGCTTGATAATTGCTTGAAGCCTTATGCTACTCATAATTTCAAGCTTTTGAAGGAAATAATGTTTTCTATTCCATCTTTCTTGTTCTGGCAGTTGTGTTTCATTATGAAGACATACCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGCAAAGGCTCAGAAATCATTACTTCCCTTCTTCTATTACCATTTAAATATTTGTTATCTTCTCTCTTCAATTTATCCGCAGGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAGTTTTGGCCGCAGCATACGTTGATCAACTCCGTCCTATACTAGAAGATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCATCCAGCTTGTTCATACGCCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACGTGCACGATTTAGAGTGTATCAGCTTGGTTCATTTTGTCACATTGATATAGAAACTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTAGGTTCTAATTCTTACTGTTTTCTCACCTTCAGTAGGGGATGGCGCTACCGCTACAATGTGGCTGCCATATGTACTACAAAAATACTATTGTGTTAGCGGATATTGTCTGTTTTGGCATGTACGTATCGCTATTAGTCTCATGGTTTAGACGTTTCTACACCCTTATAGAGAATGTGTCTTCCACACATTTATAAAGAATGTGTCGATCTGG CATTACAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAGTTTTGGCCGCAGCATACGTTGATCAACTCCGTCCTATACTAGAAGATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCATCCAGCTTGTTCATACGCCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACGTGCACGATTTAGAGTGTATCAGCTTGGTTCATTTTGTCACATTGATATAGAAACTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTAGGTTCTAATTCTTACTGTTTTCTCACCTTCAGTAGGGGATGGCGCTACCGCTACAATGTGGCTGCCATATGTACTACAAAAATACTATTGTGTTAGCGGATATTGTCTGTTTTGGCATGTACGTATCGCTATTAGTCTCATGGTTTAGACGTTTCTACACCCTTATAGAGAATGTGTCTTCCACACATTTATAAAGAATGTGTCGATCTGG ATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAG MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKRNIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN
BLAST of CmaCh09G006700 vs. TrEMBL
Match: A0A0A0L4J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.4e-104 Identity = 207/286 (72.38%), Postives = 228/286 (79.72%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TrEMBL
Match: A0A068UEH4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58 Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TrEMBL
Match: E0CS68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 5.6e-58 Identity = 116/211 (54.98%), Postives = 155/211 (73.46%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TrEMBL
Match: A5B447_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 5.6e-58 Identity = 116/211 (54.98%), Postives = 155/211 (73.46%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TrEMBL
Match: A0A059BVA2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03237 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56 Identity = 121/193 (62.69%), Postives = 143/193 (74.09%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TAIR10
Match: AT1G53460.1 (AT1G53460.1 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2)) HSP 1 Score: 185.7 bits (470), Expect = 4.0e-47 Identity = 96/195 (49.23%), Postives = 132/195 (67.69%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TAIR10
Match: AT1G55040.1 (AT1G55040.1 zinc finger (Ran-binding) family protein) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 39/129 (30.23%), Postives = 68/129 (52.71%), Query Frame = 1
BLAST of CmaCh09G006700 vs. TAIR10
Match: AT1G70650.1 (AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein) HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|449456697|ref|XP_004146085.1| (PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus]) HSP 1 Score: 387.5 bits (994), Expect = 2.0e-104 Identity = 207/286 (72.38%), Postives = 228/286 (79.72%), Query Frame = 1
BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|697178097|ref|XP_009598028.1| (PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis]) HSP 1 Score: 236.5 bits (602), Expect = 5.6e-59 Identity = 119/189 (62.96%), Postives = 146/189 (77.25%), Query Frame = 1
BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|698470249|ref|XP_009783767.1| (PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris]) HSP 1 Score: 236.1 bits (601), Expect = 7.3e-59 Identity = 118/189 (62.43%), Postives = 145/189 (76.72%), Query Frame = 1
BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|661890536|emb|CDP06033.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58 Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 1
BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|147838103|emb|CAN60929.1| (hypothetical protein VITISV_008358 [Vitis vinifera]) HSP 1 Score: 232.6 bits (592), Expect = 8.1e-58 Identity = 116/211 (54.98%), Postives = 155/211 (73.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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