CmoCh09G006530 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G006530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Zinc finger family protein, putative
Location	Cmo_Chr09 : 3256928 .. 3259574 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGTTTCAGAGTTCTTCACCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTGCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTTGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCGAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCGGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAGTAAGAAGAGTTTATGTTGTTAGTCTGGTGAATTTTCATCGTCAATGCGTTGATATTGATATCTCTGTTTCGGTTTTTGTGCAATTTTGTTTGAAAATTTGTGAGTAGATCATGTGTCTGATGTAGTGGATAGCTCTTGATCTCTTGCCACCAACGATTTCATCTATGAAGTATGAAATGCTAAGCAATTCAGAAATAGGTGGGAGAATAAAGCAAATCTTACGTAATTGGAGACAAAAAATTAGTATTATTTGGAAGTTCATGCTTGTAAGTCATTTAATGTCAATTTAGCAAATGGTGATGTGAAACTGCTGAAGCTAATTCCGATGAATCATGTGTATTTTTTAGCCTGTGCATTGACATGGGGAAACTATCCTTAGTTCTAGTTTTGAAATTTTTCAAAACATGCTCTTATACATCTTGTGGCAATCAAGACGAAGAAGAAATCGAGGTGATTGGTTGGTTTGAGAAGATATTGTGTTCATGTTTGCTTTTAAAATAAGAAACTGTTATTAGTTTCTGTTAGGGGTCAGATTACTCCAACTATATTTAGTATCATAAATGTAAAAATCTTAGTATGAATCATTCTCAGATGCATTATTTTTTTGGGTAAAATTCTTAGATGTTGATAGTTAAGGGTATGAAAGCTATGAAAAATAAGGACGATGGTGAGAGGTTTTCACACCCTTACAAATAAACGCGCGTCTACTAGGGAGAAGTTATCACACCCTTATAAAGAATATTTCGTTCTCCTCCCCAACTGACGTGGGATCTTATAATCAGAATTTTGTTTTCATTATTCAAATATGATAATATTGGCTGTTATTACTATTCCCAACCATTGTTTTTTGCTGGGTTTGTTGGTTTATAGAGGTTGTTTGGTTCAAATGGTTCAATTTTCAAAATTTATTGTACTCTTATGTCTCTCCAGTCGGTTCAATGTTGATGTTCATCTACCAAACTGACAATAGTTCAATTGGTTTTGGCATTAGTAATCCTCCACCAAAAAGTTATTCACCTAAGATATAACCGACCTGAACCGACCTCTAGTGCAAATTGTGCTGCTGCTGATGTCTGTGCTTGTCATTTTGTTTGCCTGCTGCTTGATAATTGCCTGAAGCCTTATGCTACTGATAATTTCAAGATTTTGAAGGAAATAATGTTTTCTATTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTATGAAGACATACCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGTATCCAAGAAGACACAGTAAGCAAAAGCTCAGAAATCATTACTTCCCTTCTTCTATTACCATTTAAATCTTTGTTTTCTTCTCTCTTCAAATTATCCGCAGGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCGGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGGACTAGTTTTCGCCGCAGCATACGTTGATCAACCCCATCCAATACTAGAAAATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCGTCCAGCTTGTTCATACGGCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACATACACGATTTAGAGTGCGTTAGCTTGCTTCATTTTGTCACATTGATATAGAACCTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTCGGTTCTAAACTCTTGCTGTTTTCTCACCTTCAGTAGGGGAAGGCGCTACAATGTGGCTGCCAATGTACTACAAAAGTACTTCGTAATAGTTAAAGCTCATTGTCAAAGCTCATTGTCAGTGGATATTGTCTGTTTTGACATGTTACGTATTGCTATTAGTCG

mRNA sequence

ATTTCAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGTTTCAGAGTTCTTCACCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTGCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTTGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCGAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCGGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGTATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCGGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGGACTAGTTTTCGCCGCAGCATACGTTGATCAACCCCATCCAATACTAGAAAATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCGTCCAGCTTGTTCATACGGCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACATACACGATTTAGAGTGCGTTAGCTTGCTTCATTTTGTCACATTGATATAGAACCTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTCGGTTCTAAACTCTTGCTGTTTTCTCACCTTCAGTAGGGGAAGGCGCTACAATGTGGCTGCCAATGTACTACAAAAGTACTTCGTAATAGTTAAAGCTCATTGTCAAAGCTCATTGTCAGTGGATATTGTCTGTTTTGACATGTTACGTATTGCTATTAGTCG

Coding sequence (CDS)

ATGTCTCGTTTCAGAGTTCTTCACCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTGCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTTGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCGAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCGGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGTATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCGGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGGACTAG

Homology

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BLAST of CmoCh09G006530 vs. TrEMBL
Match: A0A0A0L4J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-107
Identity = 211/286 (73.78%), Postives = 230/286 (80.42%), Query Frame = 1


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR LH +I        F+SQST SLQFH LPSTSR   +FS  I   I PEIV   R
Sbjct: 1   MSRFRPLHSQIQ------LFNSQSTISLQFHLLPSTSR---SFSLNIGERIAPEIVPGNR 60

Query: 61  NIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPDME 120
           N     +  + A S GS        RNE+ VLKG+V S+G +KLTREDAL+RK+LSPDME
Sbjct: 61  NTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDME 120

Query: 121 MFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDL 180
           MFVRHLY+EGYFNYANFLPDNK VLSYFECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDL
Sbjct: 121 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVA FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
            VV+QV TQY L+AIP+QLIIPED+KASVSRLLKEIL LSPTVSR+
Sbjct: 241 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

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BLAST of CmoCh09G006530 vs. TrEMBL
Match: E0CS68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.7e-59
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 1


Query: 64  LDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYREGY 123
           L S+ + G    G R E   L+ + D +       E+ +V K+LS DM +FV HL+REGY
Sbjct: 125 LYSLFSNGKNRDGKRGESGSLEKKEDEE-------EEPVVFKDLSEDMLLFVSHLHREGY 184

Query: 124 FNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPST 183
           F  ANFLP + L+   F+  + R +IK AAERFG+DNQEIAKWLSGSDL+KVALFGCPS 
Sbjct: 185 FKDANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSL 244

Query: 184 ARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYD 243
           +R+ VFAAKRLR FF IQE+ VC  C L+QSCK+VNQ VW   TK+LNL+VVM+++T Y 
Sbjct: 245 SRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYA 304

Query: 244 LQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           ++++P QL++P+++KASV RLLKE+L+LS TV+
Sbjct: 305 MESMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330

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BLAST of CmoCh09G006530 vs. TrEMBL
Match: A5B447_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.7e-59
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 1


Query: 64  LDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYREGY 123
           L S+ + G    G R E   L+ + D +       E+ +V K+LS DM +FV HL+REGY
Sbjct: 125 LYSLFSNGKNRDGKRGESGSLEKKEDEE-------EEPVVFKDLSEDMLLFVSHLHREGY 184

Query: 124 FNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPST 183
           F  ANFLP + L+   F+  + R +IK AAERFG+DNQEIAKWLSGSDL+KVALFGCPS 
Sbjct: 185 FKDANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSL 244

Query: 184 ARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYD 243
           +R+ VFAAKRLR FF IQE+ VC  C L+QSCK+VNQ VW   TK+LNL+VVM+++T Y 
Sbjct: 245 SRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYA 304

Query: 244 LQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           ++++P QL++P+++KASV RLLKE+L+LS TV+
Sbjct: 305 MESMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330

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BLAST of CmoCh09G006530 vs. TrEMBL
Match: A0A068UEH4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 121/217 (55.76%), Postives = 155/217 (71.43%), Query Frame = 1


Query: 65  DSVVNQGARSGGSRNEDNVLK--GRVDSKGRE---KLTREDALVRKELSPDMEMFVRHLY 124
           + + N   +SGGS          GR D K  +   +L  ED  V KELSPDMEMFV HLY
Sbjct: 137 EGLSNYEEKSGGSSLSSLFANKFGRDDGKKMKDLKELRMEDPEVYKELSPDMEMFVTHLY 196

Query: 125 REGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFG 184
             GY   +NFLP N+L +S FE  + RDFIK AAE+FG DNQEIAKW+SGSDL+K+ALFG
Sbjct: 197 NNGYLKVSNFLPRNRLDISCFENSYARDFIKFAAEQFGMDNQEIAKWMSGSDLKKLALFG 256

Query: 185 CPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVI 244
           CPS  ++ VF+AKRLR+FF IQE+TVC  C L+QSCK+VNQ +W     NL++AVVM++I
Sbjct: 257 CPSPGKKIVFSAKRLRRFFKIQENTVCDKCVLKQSCKFVNQSIWRSNDNNLDMAVVMRII 316

Query: 245 TQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           T Y L++ P QL++P++IKA+V RLLKE + LS TV+
Sbjct: 317 TSYALESGPPQLVVPDEIKATVRRLLKEAVNLSQTVA 353

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BLAST of CmoCh09G006530 vs. TrEMBL
Match: A0A059BVA2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03237 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 124/193 (64.25%), Postives = 145/193 (75.13%), Query Frame = 1


Query: 88  VDSKGREKLTRE--DALVRKELSPDMEMFVRHLYREGYFNYANFL-PDNKLVLSYFECRH 147
           VD K REK  R   DALV KELSPD E F+ HL  EGYF  ANFL  D K   S FE  +
Sbjct: 135 VDGK-REKAKRPPADALVIKELSPDAEAFLAHLLEEGYFREANFLNKDGKWDASRFEDSY 194

Query: 148 GRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDT 207
            RDF+K AAE+FG+D+QEIAKWLSGSDL+K+ALFGCPSTA++ VFAAKRLR FFSIQED 
Sbjct: 195 SRDFVKYAAEKFGKDHQEIAKWLSGSDLKKIALFGCPSTAKKSVFAAKRLRSFFSIQEDN 254

Query: 208 VCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRL 267
           VC  C LR+SCK+VNQ VWN  T NL L  VM+VIT Y L+ +P QL I E++K SVSR+
Sbjct: 255 VCRECVLRESCKFVNQNVWNSETNNLRLDTVMKVITLYALELVPSQLKITEELKVSVSRV 314

Query: 268 LKEILKLSPTVSR 278
           L++ILKLS T S+
Sbjct: 315 LRDILKLSQTTSQ 326

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BLAST of CmoCh09G006530 vs. TAIR10
Match: AT1G53460.1 (AT1G53460.1 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2))

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-48
Identity = 96/179 (53.63%), Postives = 126/179 (70.39%), Query Frame = 1


Query: 98  REDAL-VRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERF 157
           +ED + V KEL  +M  FVR L++EGY N ANF+   KL +   +  + R F+K AAERF
Sbjct: 131 KEDVIRVYKELPIEMVSFVRLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFAAERF 190

Query: 158 GRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCK 217
           G+D QEIAKWLSGSDL+K+ LFGCPS  +R VFAAK LR FF I E+ VC  C L++ CK
Sbjct: 191 GKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCK 250

Query: 218 YVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTV 276
           + NQ VW+  TK+L+L+VVM+VIT Y L     +L +P++++ SVSRLL EI  LS T+
Sbjct: 251 FPNQSVWDGKTKHLHLSVVMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEIQNLSRTI 309

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BLAST of CmoCh09G006530 vs. TAIR10
Match: AT1G55040.1 (AT1G55040.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 40/129 (31.01%), Postives = 69/129 (53.49%), Query Frame = 1


Query: 149 IKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHN 208
           +++A   FG+D  +I + LS +D++ +   GCP+T R+ VF+ K LRK   + E  VC +
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 209 CTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAI-----PKQLIIPEDIKASVSR 268
           C+LR SC+     +            +M+++  Y    +      K L+  + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 269 LLKEILKLS 273
           LL EI+KLS
Sbjct: 326 LLHEIVKLS 332

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BLAST of CmoCh09G006530 vs. TAIR10
Match: AT1G70650.1 (AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 1


Query: 118 LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAL 177
           L ++GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 178 FGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSC-KYVNQGVWNCGTKNLNLAVVM 237
            GCPST R+ V + KRLR +  I E  VC +C LR  C +   Q   + G + ++   VM
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 238 QVITQYDLQAI----PKQLIIPEDIKASVSRLLKEILKLSPT 275
           +++  Y L +I      +    + ++ SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLT 205

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BLAST of CmoCh09G006530 vs. NCBI nr
Match: gi|449456697|ref|XP_004146085.1| (PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 3.2e-107
Identity = 211/286 (73.78%), Postives = 230/286 (80.42%), Query Frame = 1


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR LH +I        F+SQST SLQFH LPSTSR   +FS  I   I PEIV   R
Sbjct: 1   MSRFRPLHSQIQ------LFNSQSTISLQFHLLPSTSR---SFSLNIGERIAPEIVPGNR 60

Query: 61  NIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPDME 120
           N     +  + A S GS        RNE+ VLKG+V S+G +KLTREDAL+RK+LSPDME
Sbjct: 61  NTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDME 120

Query: 121 MFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDL 180
           MFVRHLY+EGYFNYANFLPDNK VLSYFECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDL
Sbjct: 121 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVA FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
            VV+QV TQY L+AIP+QLIIPED+KASVSRLLKEIL LSPTVSR+
Sbjct: 241 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

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BLAST of CmoCh09G006530 vs. NCBI nr
Match: gi|697178097|ref|XP_009598028.1| (PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis])

HSP 1 Score: 240.7 bits (613), Expect = 3.0e-60
Identity = 120/189 (63.49%), Postives = 147/189 (77.78%), Query Frame = 1


Query: 88  VDSKGREKLTREDALVRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRD 147
           V S+    LT ED  V KELSPDM MFV HLY EGYF  +NFLP  +  ++ FE  + RD
Sbjct: 208 VKSRKSTPLTMEDHNVYKELSPDMVMFVTHLYNEGYFKDSNFLPRKRFDITCFENSYARD 267

Query: 148 FIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCH 207
           F+K AAE+FGRD+QEIAKWLSGSDL+KVALFGCPS A++ VF+AKRLR +F IQED VC 
Sbjct: 268 FVKYAAEQFGRDHQEIAKWLSGSDLKKVALFGCPSIAKKTVFSAKRLRTYFRIQEDNVCS 327

Query: 208 NCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKE 267
            C L+ SCK+VNQ VW     NL+LAVVM+VIT Y L+++P QL+IP++IKASVSRLLK+
Sbjct: 328 KCALKASCKFVNQSVWKGDMTNLHLAVVMRVITLYALESVPPQLVIPDEIKASVSRLLKD 387

Query: 268 ILKLSPTVS 277
           I++LS TVS
Sbjct: 388 IVRLSQTVS 396

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BLAST of CmoCh09G006530 vs. NCBI nr
Match: gi|698470249|ref|XP_009783767.1| (PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris])

HSP 1 Score: 240.4 bits (612), Expect = 3.9e-60
Identity = 119/189 (62.96%), Postives = 146/189 (77.25%), Query Frame = 1


Query: 88  VDSKGREKLTREDALVRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRD 147
           V S+    LT ED  V KELSPDM MFV HLY EGYF  +NFLP  +  ++ FE  + RD
Sbjct: 204 VKSRKSTPLTMEDHNVYKELSPDMVMFVTHLYNEGYFKDSNFLPRKRFDITCFESSYARD 263

Query: 148 FIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCH 207
           F+K AAE+FGRD+QEIAKWLSGSDL+ VALFGCPS A++ VF+AKRLR +F IQED VC 
Sbjct: 264 FVKYAAEQFGRDHQEIAKWLSGSDLKNVALFGCPSVAKKTVFSAKRLRTYFRIQEDNVCR 323

Query: 208 NCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKE 267
            C L+ SCK+VNQ VW     NL+LAVVM+VIT Y L+++P QL+IP++IKASVSRLLK+
Sbjct: 324 KCALKASCKFVNQSVWKGDMTNLHLAVVMRVITLYALESVPPQLVIPDEIKASVSRLLKD 383

Query: 268 ILKLSPTVS 277
           I++LS TVS
Sbjct: 384 IVRLSQTVS 392

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BLAST of CmoCh09G006530 vs. NCBI nr
Match: gi|743925159|ref|XP_011006717.1| (PREDICTED: uncharacterized protein LOC105112646 [Populus euphratica])

HSP 1 Score: 236.5 bits (602), Expect = 5.6e-59
Identity = 127/230 (55.22%), Postives = 161/230 (70.00%), Query Frame = 1


Query: 63  RLDSVVNQGARSGGSRNEDNVLKGR----VDSKGRE------------KLTREDA-LVRK 122
           ++ +V+++      S+N  +V  G+    V+ KG+E            K+ RED   V K
Sbjct: 108 KVKNVMSRAKEETPSKNSYSVFLGKSENKVEMKGKEERPVVFKAERKMKVGREDRPKVFK 167

Query: 123 ELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAK 182
            LSPDMEMF+ HLY+EGYFN ANFL D  L  S+F   +GRDFIK A E+FG+D+QEIAK
Sbjct: 168 VLSPDMEMFITHLYKEGYFNNANFLKDGSLDFSFFNDSYGRDFIKYAVEKFGKDHQEIAK 227

Query: 183 WLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNC 242
           WLSGSDL+KVALFGCP+  R+ VF+AKRLR FF IQE TVC+ C L+ SC +VNQ VW  
Sbjct: 228 WLSGSDLKKVALFGCPALTRKSVFSAKRLRNFFEIQEATVCNKCVLKHSCNFVNQSVWRG 287

Query: 243 GTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTV 276
            +K LNLAVVM+VIT Y L+A+  +L +P +IKASV+RLL EILKLS TV
Sbjct: 288 DSKTLNLAVVMRVITLYALEAVHPELSVPNEIKASVNRLLTEILKLSETV 337

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BLAST of CmoCh09G006530 vs. NCBI nr
Match: gi|147838103|emb|CAN60929.1| (hypothetical protein VITISV_008358 [Vitis vinifera])

HSP 1 Score: 235.7 bits (600), Expect = 9.6e-59
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 1


Query: 64  LDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYREGY 123
           L S+ + G    G R E   L+ + D +       E+ +V K+LS DM +FV HL+REGY
Sbjct: 125 LYSLFSNGKNRDGKRGESGSLEKKEDEE-------EEPVVFKDLSEDMLLFVSHLHREGY 184

Query: 124 FNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPST 183
           F  ANFLP + L+   F+  + R +IK AAERFG+DNQEIAKWLSGSDL+KVALFGCPS 
Sbjct: 185 FKDANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSL 244

Query: 184 ARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYD 243
           +R+ VFAAKRLR FF IQE+ VC  C L+QSCK+VNQ VW   TK+LNL+VVM+++T Y 
Sbjct: 245 SRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYA 304

Query: 244 LQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           ++++P QL++P+++KASV RLLKE+L+LS TV+
Sbjct: 305 MESMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330

The following BLAST results are available for this feature:

BLAST of CmoCh09G006530 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh09G006530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4J9_CUCSA	2.3e-107	73.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1	[more]
E0CS68_VITVI	6.7e-59	55.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=...	[more]
A5B447_VITVI	6.7e-59	55.40	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1	[more]
A0A068UEH4_COFCA	1.5e-58	55.76	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1	[more]
A0A059BVA2_EUCGR	1.5e-58	64.25	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03237 PE=4 SV=1	[more]

BLAST of CmoCh09G006530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53460.1	2.8e-48	53.63	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-...	[more]
AT1G55040.1	3.5e-11	31.01	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	4.3e-09	30.25	Ran BP2/NZF zinc finger-like superfamily protein	[more]

BLAST of CmoCh09G006530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456697\|ref\|XP_004146085.1\|	3.2e-107	73.78	PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus]	[more]
gi\|697178097\|ref\|XP_009598028.1\|	3.0e-60	63.49	PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis]	[more]
gi\|698470249\|ref\|XP_009783767.1\|	3.9e-60	62.96	PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris]	[more]
gi\|743925159\|ref\|XP_011006717.1\|	5.6e-59	55.22	PREDICTED: uncharacterized protein LOC105112646 [Populus euphratica]	[more]
gi\|147838103\|emb\|CAN60929.1\|	9.6e-59	55.40	hypothetical protein VITISV_008358 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G006530.1	CmoCh09G006530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 69..276 score: 7.0E
None	No IPR available	PANTHER	PTHR23111:SF24	SUBFAMILY NOT NAMED	coord: 69..276 score: 7.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G006530	Cucsa.057840	Cucumber (Gy14) v1	cgycmoB0071
CmoCh09G006530	CmaCh09G006700	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G006530	Cla023315	Watermelon (97103) v1	cmowmB030
CmoCh09G006530	Csa4G625010	Cucumber (Chinese Long) v2	cmocuB016
CmoCh09G006530	MELO3C025659	Melon (DHL92) v3.5.1	cmomeB035
CmoCh09G006530	ClCG11G017270	Watermelon (Charleston Gray)	cmowcgB009
CmoCh09G006530	CSPI04G22680	Wild cucumber (PI 183967)	cmocpiB015
CmoCh09G006530	Lsi04G019930	Bottle gourd (USVL1VR-Ls)	cmolsiB013
CmoCh09G006530	Cp4.1LG06g05210	Cucurbita pepo (Zucchini)	cmocpeB034
CmoCh09G006530	MELO3C025659.2	Melon (DHL92) v3.6.1	cmomedB034
CmoCh09G006530	CsaV3_4G032920	Cucumber (Chinese Long) v3	cmocucB0019
CmoCh09G006530	Cla97C11G223380	Watermelon (97103) v2	cmowmbB009
CmoCh09G006530	Bhi09G002889	Wax gourd	cmowgoB0022
CmoCh09G006530	CsGy4G021140	Cucumber (Gy14) v2	cgybcmoB437
CmoCh09G006530	Carg03077	Silver-seed gourd	carcmoB0865

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G006530	Silver-seed gourd	carcmoB0426
CmoCh09G006530	Cucurbita moschata (Rifu)	cmocmoB013
CmoCh09G006530	Cucurbita maxima (Rimu)	cmacmoB432
CmoCh09G006530	Cucurbita pepo (Zucchini)	cmocpeB030