CmaCh09G006700 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G006700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger family protein, putative
Location	Cma_Chr09 : 3161245 .. 3163878 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTACAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAGTAAGAAGAGTTTATGTTGTTAATCTTGTGAATTTTCATCGTCAATGCGTTAATATTGATATCTCTGTTTCGGTTTTTGTGCAATTTTGTTTGAATTTTGTGAGTAGATCATGTGTCTGATGTAGTGGATGGCTCTTAATTTCTTGCCACCAACGATTTCATCTATGAAATATGAAATGCTAAGCAATTCAGAAATATTGTGAGTGGGAGAAGAAACCAAATCTTACGTAATTGGAGACAAGAAATTAGTATTATTAGGAAATTCATGCTTGTAGGTCATTTAATGTCAATTTAGCAAATGGTGATGTGAAACTGCTGAAGCTAAGTCCGATGAATCATGTGTATTTTTTAGCCTGTGCATTGACATGGGGAAGCTATCCTTAGTTCTAGGTTTGAACTTTTTCAAATCATGCTCGTATGCATCTTGTGGCAATCAAGACGAAGAAGAAATCAAGGTGATTTGGTTGGTTTGAGAAGATATTGTGTTCGTGTTTGTTTTTAAAATAAGAAACTGTTATTAGTTTCTGTTAGGGGTCAGATCACTCCAACTATATTTAGTATCATTAATGTAAAAATCTTAGTATGAATCATTCTCAGATGCATTATTTTTTTGGGTAAAATTCTTAGATGTTGGTAGTTAAGGGTAACGAAAGCTATGGAAAATAAGGACGATGGTGGTGAGAGGTTTTCACACCCTTACAAATAAACGCGCATTTGCTAGGGAGAAGTTGTCACACCCTTATAAAGAATATTTCATTCTCTTCCCCAACTGACGTGGGATCTTATAGTGATAATCAAAATTTTGTTTTCTATTATTCAAATATGATAATATTGGCTGCTAGTACTATTCCCAACCATTGTTTTTTGCTGGGTTTGTTGGTTTATAGAGGTTGTTTGGTTGAAATGGTTCAATTTTCAAAATTTATTGTACTCTTGTGTCTCTCCAGTCGGTTCAATGTTGATGTTCATCTACCAAACTGACTATAGTGAAAATTGTGCTGCAGCTGATGTCTGCACTTGTCATTTTGTTTACCTGCTGCTTGATAATTGCTTGAAGCCTTATGCTACTCATAATTTCAAGCTTTTGAAGGAAATAATGTTTTCTATTCCATCTTTCTTGTTCTGGCAGTTGTGTTTCATTATGAAGACATACCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGCAAAGGCTCAGAAATCATTACTTCCCTTCTTCTATTACCATTTAAATATTTGTTATCTTCTCTCTTCAATTTATCCGCAGGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAGTTTTGGCCGCAGCATACGTTGATCAACTCCGTCCTATACTAGAAGATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCATCCAGCTTGTTCATACGCCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACGTGCACGATTTAGAGTGTATCAGCTTGGTTCATTTTGTCACATTGATATAGAAACTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTAGGTTCTAATTCTTACTGTTTTCTCACCTTCAGTAGGGGATGGCGCTACCGCTACAATGTGGCTGCCATATGTACTACAAAAATACTATTGTGTTAGCGGATATTGTCTGTTTTGGCATGTACGTATCGCTATTAGTCTCATGGTTTAGACGTTTCTACACCCTTATAGAGAATGTGTCTTCCACACATTTATAAAGAATGTGTCGATCTGG

mRNA sequence

CATTACAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAGTTTTGGCCGCAGCATACGTTGATCAACTCCGTCCTATACTAGAAGATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCATCCAGCTTGTTCATACGCCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACGTGCACGATTTAGAGTGTATCAGCTTGGTTCATTTTGTCACATTGATATAGAAACTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTAGGTTCTAATTCTTACTGTTTTCTCACCTTCAGTAGGGGATGGCGCTACCGCTACAATGTGGCTGCCATATGTACTACAAAAATACTATTGTGTTAGCGGATATTGTCTGTTTTGGCATGTACGTATCGCTATTAGTCTCATGGTTTAGACGTTTCTACACCCTTATAGAGAATGTGTCTTCCACACATTTATAAAGAATGTGTCGATCTGG

Coding sequence (CDS)

ATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAG

Protein sequence

MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKRNIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN

Homology

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BLAST of CmaCh09G006700 vs. TrEMBL
Match: A0A0A0L4J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.4e-104
Identity = 207/286 (72.38%), Postives = 228/286 (79.72%), Query Frame = 1


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR LH +I        F+SQST SLQFH LPSTSR   +FS  I   I PEIV   R
Sbjct: 1   MSRFRPLHSQIQ------LFNSQSTISLQFHLLPSTSR---SFSLNIGERIAPEIVPGNR 60

Query: 61  NIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREILKRENALVRKELSPDME 120
           N     +  + A S GS        RNE+ VLKG+V S+G + L RE+AL+RK+LSPDME
Sbjct: 61  NTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDME 120

Query: 121 MFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDL 180
           MFVRHLY+EGYFNY+NFLPDNK VLSYFECRHGRDFIKSAA+RF RDNQEIAKWLSGSDL
Sbjct: 121 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVA FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 279
            VV++V TQY L+AIP+QLIIPED+KASVSRLLKEIL LSPTVSRN
Sbjct: 241 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

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BLAST of CmaCh09G006700 vs. TrEMBL
Match: A0A068UEH4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 1


Query: 63  RSDSVVNQGARSGGSRNEDNVLK--GRVDSKGREILKR---ENALVRKELSPDMEMFVRH 122
           +++ + N   +SGGS          GR D K  + LK    E+  V KELSPDMEMFV H
Sbjct: 135 KNEGLSNYEEKSGGSSLSSLFANKFGRDDGKKMKDLKELRMEDPEVYKELSPDMEMFVTH 194

Query: 123 LYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVAL 182
           LY  GY   SNFLP N+L +S FE  + RDFIK AAE+F  DNQEIAKW+SGSDL+K+AL
Sbjct: 195 LYNNGYLKVSNFLPRNRLDISCFENSYARDFIKFAAEQFGMDNQEIAKWMSGSDLKKLAL 254

Query: 183 FGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMK 242
           FGCPS  ++ VF+AKRLR+FF+IQE+TVC  C L+QSCK+VNQ +W     NL++AVVM+
Sbjct: 255 FGCPSPGKKIVFSAKRLRRFFKIQENTVCDKCVLKQSCKFVNQSIWRSNDNNLDMAVVMR 314

Query: 243 VITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           +IT Y L++ P QL++P++IKA+V RLLKE + LS TV+
Sbjct: 315 IITSYALESGPPQLVVPDEIKATVRRLLKEAVNLSQTVA 353

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BLAST of CmaCh09G006700 vs. TrEMBL
Match: E0CS68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.6e-58
Identity = 116/211 (54.98%), Postives = 155/211 (73.46%), Query Frame = 1


Query: 66  SVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFN 125
           S+ + G    G R E   L+ + D +       E  +V K+LS DM +FV HL+REGYF 
Sbjct: 127 SLFSNGKNRDGKRGESGSLEKKEDEE-------EEPVVFKDLSEDMLLFVSHLHREGYFK 186

Query: 126 YSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTAR 185
            +NFLP + L+   F+  + R +IK AAERF +DNQEIAKWLSGSDL+KVALFGCPS +R
Sbjct: 187 DANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLSR 246

Query: 186 RDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQ 245
           + VFAAKRLR FFRIQE+ VC  C L+QSCK+VNQ VW   TK+LNL+VVM+++T Y ++
Sbjct: 247 KSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAME 306

Query: 246 AIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           ++P QL++P+++KASV RLLKE+L+LS TV+
Sbjct: 307 SMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330

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BLAST of CmaCh09G006700 vs. TrEMBL
Match: A5B447_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.6e-58
Identity = 116/211 (54.98%), Postives = 155/211 (73.46%), Query Frame = 1


Query: 66  SVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFN 125
           S+ + G    G R E   L+ + D +       E  +V K+LS DM +FV HL+REGYF 
Sbjct: 127 SLFSNGKNRDGKRGESGSLEKKEDEE-------EEPVVFKDLSEDMLLFVSHLHREGYFK 186

Query: 126 YSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTAR 185
            +NFLP + L+   F+  + R +IK AAERF +DNQEIAKWLSGSDL+KVALFGCPS +R
Sbjct: 187 DANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLSR 246

Query: 186 RDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQ 245
           + VFAAKRLR FFRIQE+ VC  C L+QSCK+VNQ VW   TK+LNL+VVM+++T Y ++
Sbjct: 247 KSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAME 306

Query: 246 AIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           ++P QL++P+++KASV RLLKE+L+LS TV+
Sbjct: 307 SMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330

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BLAST of CmaCh09G006700 vs. TrEMBL
Match: A0A059BVA2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03237 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56
Identity = 121/193 (62.69%), Postives = 143/193 (74.09%), Query Frame = 1


Query: 88  VDSKGREILKRE--NALVRKELSPDMEMFVRHLYREGYFNYSNFL-PDNKLVLSYFECRH 147
           VD K RE  KR   +ALV KELSPD E F+ HL  EGYF  +NFL  D K   S FE  +
Sbjct: 135 VDGK-REKAKRPPADALVIKELSPDAEAFLAHLLEEGYFREANFLNKDGKWDASRFEDSY 194

Query: 148 GRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDT 207
            RDF+K AAE+F +D+QEIAKWLSGSDL+K+ALFGCPSTA++ VFAAKRLR FF IQED 
Sbjct: 195 SRDFVKYAAEKFGKDHQEIAKWLSGSDLKKIALFGCPSTAKKSVFAAKRLRSFFSIQEDN 254

Query: 208 VCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRL 267
           VC  C LR+SCK+VNQ VWN  T NL L  VMKVIT Y L+ +P QL I E++K SVSR+
Sbjct: 255 VCRECVLRESCKFVNQNVWNSETNNLRLDTVMKVITLYALELVPSQLKITEELKVSVSRV 314

Query: 268 LKEILKLSPTVSR 278
           L++ILKLS T S+
Sbjct: 315 LRDILKLSQTTSQ 326

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BLAST of CmaCh09G006700 vs. TAIR10
Match: AT1G53460.1 (AT1G53460.1 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2))

HSP 1 Score: 185.7 bits (470), Expect = 4.0e-47
Identity = 96/195 (49.23%), Postives = 132/195 (67.69%), Query Frame = 1


Query: 83  VLKGRVDSKGREILKRENALVR--KELSPDMEMFVRHLYREGYFNYSNFLPDNKLVLSYF 142
           + KG  + + ++  K +  ++R  KEL  +M  FVR L++EGY N +NF+   KL +   
Sbjct: 115 LFKGDEEKEVKKHSKEKEDVIRVYKELPIEMVSFVRLLHKEGYLNKANFITGEKLDMGNL 174

Query: 143 ECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRI 202
           +  + R F+K AAERF +D QEIAKWLSGSDL+K+ LFGCPS  +R VFAAK LR FF I
Sbjct: 175 DEEYARTFVKFAAERFGKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVFAAKTLRNFFDI 234

Query: 203 QEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKAS 262
            E+ VC  C L++ CK+ NQ VW+  TK+L+L+VVMKVIT Y L     +L +P++++ S
Sbjct: 235 HENNVCEKCVLKEKCKFPNQSVWDGKTKHLHLSVVMKVITLYPLDLTHPKLQVPQEVQDS 294

Query: 263 VSRLLKEILKLSPTV 276
           VSRLL EI  LS T+
Sbjct: 295 VSRLLTEIQNLSRTI 309

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BLAST of CmaCh09G006700 vs. TAIR10
Match: AT1G55040.1 (AT1G55040.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 39/129 (30.23%), Postives = 68/129 (52.71%), Query Frame = 1


Query: 149 IKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHN 208
           +++A   F +D  +I + LS +D++ +   GCP+T R+ VF+ K LRK   + E  VC +
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 209 CTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAI-----PKQLIIPEDIKASVSR 268
           C+LR SC+     +            +M+++  Y    +      K L+  + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 269 LLKEILKLS 273
           LL EI+KLS
Sbjct: 326 LLHEIVKLS 332

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BLAST of CmaCh09G006700 vs. TAIR10
Match: AT1G70650.1 (AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09
Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1


Query: 118 LYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVAL 177
           L ++GYF  S  +P    ++S  E  H    I++A   F+R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFEES-LIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 178 FGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSC-KYVNQGVWNCGTKNLNLAVVM 237
            GCPST R+ V + KRLR +  I E  VC +C LR  C +   Q   + G + ++   VM
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 238 KVITQYDLQAI----PKQLIIPEDIKASVSRLLKEILKLSPT 275
           +++  Y L +I      +    + ++ SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLT 205

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BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|449456697|ref|XP_004146085.1| (PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 2.0e-104
Identity = 207/286 (72.38%), Postives = 228/286 (79.72%), Query Frame = 1


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR LH +I        F+SQST SLQFH LPSTSR   +FS  I   I PEIV   R
Sbjct: 1   MSRFRPLHSQIQ------LFNSQSTISLQFHLLPSTSR---SFSLNIGERIAPEIVPGNR 60

Query: 61  NIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREILKRENALVRKELSPDME 120
           N     +  + A S GS        RNE+ VLKG+V S+G + L RE+AL+RK+LSPDME
Sbjct: 61  NTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDME 120

Query: 121 MFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDL 180
           MFVRHLY+EGYFNY+NFLPDNK VLSYFECRHGRDFIKSAA+RF RDNQEIAKWLSGSDL
Sbjct: 121 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVA FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 279
            VV++V TQY L+AIP+QLIIPED+KASVSRLLKEIL LSPTVSRN
Sbjct: 241 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

[Close]

BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|697178097|ref|XP_009598028.1| (PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis])

HSP 1 Score: 236.5 bits (602), Expect = 5.6e-59
Identity = 119/189 (62.96%), Postives = 146/189 (77.25%), Query Frame = 1


Query: 88  VDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRD 147
           V S+    L  E+  V KELSPDM MFV HLY EGYF  SNFLP  +  ++ FE  + RD
Sbjct: 208 VKSRKSTPLTMEDHNVYKELSPDMVMFVTHLYNEGYFKDSNFLPRKRFDITCFENSYARD 267

Query: 148 FIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCH 207
           F+K AAE+F RD+QEIAKWLSGSDL+KVALFGCPS A++ VF+AKRLR +FRIQED VC 
Sbjct: 268 FVKYAAEQFGRDHQEIAKWLSGSDLKKVALFGCPSIAKKTVFSAKRLRTYFRIQEDNVCS 327

Query: 208 NCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKE 267
            C L+ SCK+VNQ VW     NL+LAVVM+VIT Y L+++P QL+IP++IKASVSRLLK+
Sbjct: 328 KCALKASCKFVNQSVWKGDMTNLHLAVVMRVITLYALESVPPQLVIPDEIKASVSRLLKD 387

Query: 268 ILKLSPTVS 277
           I++LS TVS
Sbjct: 388 IVRLSQTVS 396

[Close]

BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|698470249|ref|XP_009783767.1| (PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris])

HSP 1 Score: 236.1 bits (601), Expect = 7.3e-59
Identity = 118/189 (62.43%), Postives = 145/189 (76.72%), Query Frame = 1


Query: 88  VDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRD 147
           V S+    L  E+  V KELSPDM MFV HLY EGYF  SNFLP  +  ++ FE  + RD
Sbjct: 204 VKSRKSTPLTMEDHNVYKELSPDMVMFVTHLYNEGYFKDSNFLPRKRFDITCFESSYARD 263

Query: 148 FIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCH 207
           F+K AAE+F RD+QEIAKWLSGSDL+ VALFGCPS A++ VF+AKRLR +FRIQED VC 
Sbjct: 264 FVKYAAEQFGRDHQEIAKWLSGSDLKNVALFGCPSVAKKTVFSAKRLRTYFRIQEDNVCR 323

Query: 208 NCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKE 267
            C L+ SCK+VNQ VW     NL+LAVVM+VIT Y L+++P QL+IP++IKASVSRLLK+
Sbjct: 324 KCALKASCKFVNQSVWKGDMTNLHLAVVMRVITLYALESVPPQLVIPDEIKASVSRLLKD 383

Query: 268 ILKLSPTVS 277
           I++LS TVS
Sbjct: 384 IVRLSQTVS 392

[Close]

BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|661890536|emb|CDP06033.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58
Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 1


Query: 63  RSDSVVNQGARSGGSRNEDNVLK--GRVDSKGREILKR---ENALVRKELSPDMEMFVRH 122
           +++ + N   +SGGS          GR D K  + LK    E+  V KELSPDMEMFV H
Sbjct: 135 KNEGLSNYEEKSGGSSLSSLFANKFGRDDGKKMKDLKELRMEDPEVYKELSPDMEMFVTH 194

Query: 123 LYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVAL 182
           LY  GY   SNFLP N+L +S FE  + RDFIK AAE+F  DNQEIAKW+SGSDL+K+AL
Sbjct: 195 LYNNGYLKVSNFLPRNRLDISCFENSYARDFIKFAAEQFGMDNQEIAKWMSGSDLKKLAL 254

Query: 183 FGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMK 242
           FGCPS  ++ VF+AKRLR+FF+IQE+TVC  C L+QSCK+VNQ +W     NL++AVVM+
Sbjct: 255 FGCPSPGKKIVFSAKRLRRFFKIQENTVCDKCVLKQSCKFVNQSIWRSNDNNLDMAVVMR 314

Query: 243 VITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           +IT Y L++ P QL++P++IKA+V RLLKE + LS TV+
Sbjct: 315 IITSYALESGPPQLVVPDEIKATVRRLLKEAVNLSQTVA 353

[Close]

BLAST of CmaCh09G006700 vs. NCBI nr
Match: gi|147838103|emb|CAN60929.1| (hypothetical protein VITISV_008358 [Vitis vinifera])

HSP 1 Score: 232.6 bits (592), Expect = 8.1e-58
Identity = 116/211 (54.98%), Postives = 155/211 (73.46%), Query Frame = 1


Query: 66  SVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFN 125
           S+ + G    G R E   L+ + D +       E  +V K+LS DM +FV HL+REGYF 
Sbjct: 127 SLFSNGKNRDGKRGESGSLEKKEDEE-------EEPVVFKDLSEDMLLFVSHLHREGYFK 186

Query: 126 YSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTAR 185
            +NFLP + L+   F+  + R +IK AAERF +DNQEIAKWLSGSDL+KVALFGCPS +R
Sbjct: 187 DANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLSR 246

Query: 186 RDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQ 245
           + VFAAKRLR FFRIQE+ VC  C L+QSCK+VNQ VW   TK+LNL+VVM+++T Y ++
Sbjct: 247 KSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAME 306

Query: 246 AIPKQLIIPEDIKASVSRLLKEILKLSPTVS 277
           ++P QL++P+++KASV RLLKE+L+LS TV+
Sbjct: 307 SMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330

The following BLAST results are available for this feature:

BLAST of CmaCh09G006700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G006700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4J9_CUCSA	1.4e-104	72.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1	[more]
A0A068UEH4_COFCA	1.9e-58	55.25	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1	[more]
E0CS68_VITVI	5.6e-58	54.98	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=...	[more]
A5B447_VITVI	5.6e-58	54.98	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1	[more]
A0A059BVA2_EUCGR	2.4e-56	62.69	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03237 PE=4 SV=1	[more]

BLAST of CmaCh09G006700 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53460.1	4.0e-47	49.23	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-...	[more]
AT1G55040.1	1.3e-10	30.23	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	4.3e-09	30.86	Ran BP2/NZF zinc finger-like superfamily protein	[more]

BLAST of CmaCh09G006700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456697\|ref\|XP_004146085.1\|	2.0e-104	72.38	PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus]	[more]
gi\|697178097\|ref\|XP_009598028.1\|	5.6e-59	62.96	PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis]	[more]
gi\|698470249\|ref\|XP_009783767.1\|	7.3e-59	62.43	PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris]	[more]
gi\|661890536\|emb\|CDP06033.1\|	2.8e-58	55.25	unnamed protein product [Coffea canephora]	[more]
gi\|147838103\|emb\|CAN60929.1\|	8.1e-58	54.98	hypothetical protein VITISV_008358 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G006700.1	CmaCh09G006700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 69..276 score: 2.9
None	No IPR available	PANTHER	PTHR23111:SF24	SUBFAMILY NOT NAMED	coord: 69..276 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G006700	Cucsa.057840	Cucumber (Gy14) v1	cgycmaB0076
CmaCh09G006700	Cla023315	Watermelon (97103) v1	cmawmB038
CmaCh09G006700	Csa4G625010	Cucumber (Chinese Long) v2	cmacuB025
CmaCh09G006700	MELO3C025659	Melon (DHL92) v3.5.1	cmameB046
CmaCh09G006700	ClCG11G017270	Watermelon (Charleston Gray)	cmawcgB016
CmaCh09G006700	CSPI04G22680	Wild cucumber (PI 183967)	cmacpiB024
CmaCh09G006700	CmoCh09G006530	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G006700	Lsi04G019930	Bottle gourd (USVL1VR-Ls)	cmalsiB025
CmaCh09G006700	Cp4.1LG06g05210	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G006700	MELO3C025659.2	Melon (DHL92) v3.6.1	cmamedB044
CmaCh09G006700	CsaV3_4G032920	Cucumber (Chinese Long) v3	cmacucB0032
CmaCh09G006700	Cla97C11G223380	Watermelon (97103) v2	cmawmbB021
CmaCh09G006700	Bhi09G002889	Wax gourd	cmawgoB0028
CmaCh09G006700	CsGy4G021140	Cucumber (Gy14) v2	cgybcmaB470
CmaCh09G006700	Carg03077	Silver-seed gourd	carcmaB0889

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G006700	Cucurbita pepo (Zucchini)	cmacpeB055
CmaCh09G006700	Silver-seed gourd	carcmaB0432
CmaCh09G006700	Cucurbita maxima (Rimu)	cmacmaB045
CmaCh09G006700	Cucurbita moschata (Rifu)	cmacmoB041