Cucsa.057840 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.057840
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein .
Location	scaffold00614 : 155259 .. 158255 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTTCTACTCGTCTATGTCTCGCTTCAGACCTCTTCACTCTCAAATCCAACTCTTCAATTCACAATCCACAATTTCCCTTCAATTTCACCTTCTTCCTTCTACTTCTCGATCTTTCTCACTGAATATTGGAGAGCGGATCGCACCAGAAATTGTCCCCGGTAACAGGAATACACCGCCGCCGTTTCTGTGTAGGGAAGCCGCGAATTCGGACGGAAGTGTAAAATCTCAAGAAGGGAAAGGTAGGAATGAAGAGACTGTGCTGAAAGGAAAAGTGGGTTCTGAAGGAAACAAGAAATTGACGAGGGAGGATGCTTTGCTCCGCAAACAGCTTTCTCCGGATATGGAGATGTTTGTGAGACATTTGTACCAGGAAGGATATTTTAACTATGCTAATTTCTTGCCCGATAACAAATTTGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTCAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAAGAGTTTTGATTTTAGATTTTTAAATGTGGTATCTCTTTTGCGTTTTCGTTTTTATGTAATTTTTTGAGAATTGGTGTGAGATCATCATGTCTGATGAAGTGGATAGCTTTAATCTTTTGCTAATGACGATTTCATTTATAGAGTATGAAGTGCTGTGAGATTTGGATATATTGTGTGTGGAAGAATGGAACAAGGAAAATTATTTTtGTTTTTtACTTTGAATCAGTTCCATGATTTGGCTTGTGTATTGACATGGGGAAACTATACTTAATTCTAGTATTGAGGTTTTTCAAAACATGCTCTATGCATTTTGCGGTGGTAATTAAGACAAAGAAGAAATTGAGGTCATTCTCTGTTGGGGTTAGATTACTCTAACTAACTACATTTAGTATCATAAATGTAAAAATGATAGTTTGGATCATTTTTAGATGCATTAATTTTTTtAATAGGAGTTTTCATTTTCGAAGCATTAGTTTCATATTATGGGTATGAAAGCTATGAAAAGATATTCTTTTTCACTTTTGAAAGGACTATGGTCAAAGTTGGAAGTTTGATTTTCCATAACTCAAATATTAGAATATCTGCTGCTATTATTCCCTAACAAGTTGTTTTTGCTTGGCTCGATTGGTTCATCTTTCAAAAGTAATTGTACAGGTCGGTTTTGTGTTGATATTCAACTTAGTGAGCAATTTTAATGGTTCCATCTCCCACCCCTATCATTGTTGAACTAAAAAaGATATCCATTTACCAACCCATATTGTTTAATTAGTTTTAGCATTAGTAACCCTTGACTAAATAGTTATCCATCTAAGACATAACTGACCTAAACCGACCTATCTTGGTCTTCAATTTACTCTTTCCTAGCTAATCTCTCTGCTTTTCATTTTTCTATCTGCTGCTTGATAATTGCTTGAATCCTTCTGGGACTGATAATTTCAAGATTGTACAAGACATTAATGTGTCAGATTTTTAAGTGTAGTGAACATAAAAGTGTAATATTCCTAATAAGTTACAAAATCTAACATTCTGATTCCAAAAGAAaTAATTTTTTGTACTTCATCTTTGTGGTTGTGGCAGTTGTGTTTCTTTATGAAGATGCCCCTATTGTTTCACGTCTTGAATTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGATGTCCATCCACTGCAAGAAAAGATGTTTTTGCGGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGAAAAACCAATATTACCTTGTTCCTTCCATTACCAACTAATTTTTAGTAGAATTCTTTGGCTTATTTTCTTCCTCTTCAAATTATCTGCAGGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTCAATCAAGGTGTTTGGAATGAGGACACCAAGAATTTGAATTTAGGGGTTGTTTTGCAAGTTACTACTCAATACGCCTTAGAAGCTATACCAGAACAACTTATAATACCTGAAGATGTAAAGGCTTCCGTAAGTCGATTGCTGAAAGAGATATTAAACCTAAGTCCGACCGTGTCGAGGAACTAGTTTTTGTTGCAAGTTTAGCGGAAGCAAAAATCCTTCGGTCCTCAGGAAAATCTGGTTGCTCTCCCATGTGCTGTTGAATCGATGCATCCAACTTTTCAAGAGGAGTTTGTGAGCAGTGAAGTTAAGTTAATACTTGTTTCTTTGTTTGGTAATTGATATACATGGTTTTGAGCGACTCATCTTGTTGACGTGGATAATAGGTTATAGAACCTGACAATTCAGGTTCAATTATTATATGCCTAAATAAGTATCTAGTGGTTATTAAGAATTGTACAAGCTTTTCACATTCATTCTGATATTGTACTTTGTGTTAGATGACCACCATTCTTAAGAAAGATCTAATAGAGGATGGAGATATGATTTTGGTTGGTGGTTGTAGTAGTGTTCGCTAACGACAATTCGCAAGTGGCATTGTAACCATTTTTATATTTGAAAGGTGACTACTGACTTGTTTCTTACCAGATATACCCATTTTGTAAAATGAGAGAAGGTATGGGATAGAAAAATTCACCACAACTTACAAAGTTCGGGGATGGGATAGGGAATGCATTCCCATTTCCCCGTTTATATATACATACCATGGATGTCTAGATGATTAAATAACTTGATTTGACATTTTATTTTGTTTCGTGTAACTCAGATGCCATGAGATCCAGGTTGTTGAAGTGATGACTACCCGATGGGTTTGAAAAACAGTTTCTTGGTTAATATTCAAAATATCATTGTTGAGTTAATTCAAAACCTTCATACAACATAATTTAGTTATTTCAAAAGAAGATTTGATGGGGAAACAACTTGTGGAGAATATATATCTTAGACATGAATTGTGGCACGTGCGAAGATTGGCTGGCTGTGAGAAACTTAACGTGAGCGGCACGTGATTCTATCATTCCTTCAGATG

mRNA sequence

CAAACTTCTACTCGTCTATGTCTCGCTTCAGACCTCTTCACTCTCAAATCCAACTCTTCAATTCACAATCCACAATTTCCCTTCAATTTCACCTTCTTCCTTCTACTTCTCGATCTTTCTCACTGAATATTGGAGAGCGGATCGCACCAGAAATTGTCCCCGGTAACAGGAATACACCGCCGCCGTTTCTGTGTAGGGAAGCCGCGAATTCGGACGGAAGTGTAAAATCTCAAGAAGGGAAAGGTAGGAATGAAGAGACTGTGCTGAAAGGAAAAGTGGGTTCTGAAGGAAACAAGAAATTGACGAGGGAGGATGCTTTGCTCCGCAAACAGCTTTCTCCGGATATGGAGATGTTTGTGAGACATTTGTACCAGGAAGGATATTTTAACTATGCTAATTTCTTGCCCGATAACAAATTTGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTCAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGATGTCCATCCACTGCAAGAAAAGATGTTTTTGCGGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTCAATCAAGGTGTTTGGAATGAGGACACCAAGAATTTGAATTTAGGGGTTGTTTTGCAAGTTACTACTCAATACGCCTTAGAAGCTATACCAGAACAACTTATAATACCTGAAGATGTAAAGGCTTCCGTAAGTCGATTGCTGAAAGAGATATTAAACCTAAGTCCGACCGTGTCGAGGAACTAGTTTTTGTTGCAAGTTTAGCGGAAGCAAAAATCCTTCGGTCCTCAGGAAAATCTGGTTGCTCTCCCATGTGCTGTTGAATCGATGCATCCAACTTTTCAAGAGGAGTTTGTGAGCAGTGAAGTTAAGTTAATACTTGTTTCTTTGTTTGGTAATTGATATACATGGTTTTGAGCGACTCATCTTGTTGACGTGGATAATAGGTTATAGAACCTGACAATTCAGGTTCAATTATTATATGCCTAAATAAGTATCTAGTGGTTATTAAGAATTGTACAAGCTTTTCACATTCATTCTGATATTGTACTTTGTGTTAGATGACCACCATTCTTAAGAAAGATCTAATAGAGGATGGAGATATGATTTTGGTTGGTGGTTGTAGTAGTGTTCGCTAACGACAATTCGCAAGTGGCATTGTAACCATTTTTATATTTGAAAGGTGACTACTGACTTGTTTCTTACCAGATATACCCATTTTGTAAAATGAGAGAAGGTATGGGATAGAAAAATTCACCACAACTTACAAAGTTCGGGGATGGGATAGGGAATGCATTCCCATTTCCCCGTTTATATATACATACCATGGATGTCTAGATGATTAAATAACTTGATTTGACATTTTATTTTGTTTCGTGTAACTCAGATGCCATGAGATCCAGGTTGTTGAAGTGATGACTACCCGATGGGTTTGAAAAACAGTTTCTTGGTTAATATTCAAAATATCATTGTTGAGTTAATTCAAAACCTTCATACAACATAATTTAGTTATTTCAAAAGAAGATTTGATGGGGAAACAACTTGTGGAGAATATATATCTTAGACATGAATTGTGGCACGTGCGAAGATTGGCTGGCTGTGAGAAACTTAACGTGAGCGGCACGTGATTCTATCATTCCTTCAGATG

Coding sequence (CDS)

ATGTCTCGCTTCAGACCTCTTCACTCTCAAATCCAACTCTTCAATTCACAATCCACAATTTCCCTTCAATTTCACCTTCTTCCTTCTACTTCTCGATCTTTCTCACTGAATATTGGAGAGCGGATCGCACCAGAAATTGTCCCCGGTAACAGGAATACACCGCCGCCGTTTCTGTGTAGGGAAGCCGCGAATTCGGACGGAAGTGTAAAATCTCAAGAAGGGAAAGGTAGGAATGAAGAGACTGTGCTGAAAGGAAAAGTGGGTTCTGAAGGAAACAAGAAATTGACGAGGGAGGATGCTTTGCTCCGCAAACAGCTTTCTCCGGATATGGAGATGTTTGTGAGACATTTGTACCAGGAAGGATATTTTAACTATGCTAATTTCTTGCCCGATAACAAATTTGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTCAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGATGTCCATCCACTGCAAGAAAAGATGTTTTTGCGGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTACGTCAATCAAGGTGTTTGGAATGAGGACACCAAGAATTTGAATTTAGGGGTTGTTTTGCAAGTTACTACTCAATACGCCTTAGAAGCTATACCAGAACAACTTATAATACCTGAAGATGTAAAGGCTTCCGTAAGTCGATTGCTGAAAGAGATATTAAACCTAAGTCCGACCGTGTCGAGGAACTAG

Protein sequence

MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN*

Homology

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BLAST of Cucsa.057840 vs. TrEMBL
Match: A0A0A0L4J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 5.9e-156
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1


Query: 1   MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR 60
           MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR
Sbjct: 1   MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR 60

Query: 61  EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE 120
           EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE
Sbjct: 61  EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE 120

Query: 121 GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCP 180
           GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCP
Sbjct: 121 GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCP 180

Query: 181 STARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQ 240
           STARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQ
Sbjct: 181 STARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQ 240

Query: 241 YALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 278
           YALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN
Sbjct: 241 YALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

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BLAST of Cucsa.057840 vs. TrEMBL
Match: A5B447_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.5e-60
Identity = 118/202 (58.42%), Postives = 155/202 (76.73%), Query Frame = 1


Query: 74  GKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQEGYFNYANFLPDNK 133
           GK R+ +   +G+ GS   K+   E+ ++ K LS DM +FV HL++EGYF  ANFLP + 
Sbjct: 132 GKNRDGK---RGESGSLEKKEDEEEEPVVFKDLSEDMLLFVSHLHREGYFKDANFLPRSG 191

Query: 134 FVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRL 193
            +   F+  + R +IK AA+RFG+DNQEIAKWLSGSDL+KVA FGCPS +RK VFAAKRL
Sbjct: 192 LIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLSRKSVFAAKRL 251

Query: 194 RKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQYALEAIPEQLIIP 253
           R FFRIQE+ VC KC+L+QSCK+VNQ VW  DTK+LNL VV+++ T YA+E++P QL++P
Sbjct: 252 RTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAMESMPPQLVLP 311

Query: 254 EDVKASVSRLLKEILNLSPTVS 276
           ++VKASV RLLKE+L LS TV+
Sbjct: 312 DEVKASVGRLLKEVLRLSETVA 330

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BLAST of Cucsa.057840 vs. TrEMBL
Match: E0CS68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.5e-60
Identity = 118/202 (58.42%), Postives = 155/202 (76.73%), Query Frame = 1


Query: 74  GKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQEGYFNYANFLPDNK 133
           GK R+ +   +G+ GS   K+   E+ ++ K LS DM +FV HL++EGYF  ANFLP + 
Sbjct: 132 GKNRDGK---RGESGSLEKKEDEEEEPVVFKDLSEDMLLFVSHLHREGYFKDANFLPRSG 191

Query: 134 FVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRL 193
            +   F+  + R +IK AA+RFG+DNQEIAKWLSGSDL+KVA FGCPS +RK VFAAKRL
Sbjct: 192 LIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLSRKSVFAAKRL 251

Query: 194 RKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQYALEAIPEQLIIP 253
           R FFRIQE+ VC KC+L+QSCK+VNQ VW  DTK+LNL VV+++ T YA+E++P QL++P
Sbjct: 252 RTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAMESMPPQLVLP 311

Query: 254 EDVKASVSRLLKEILNLSPTVS 276
           ++VKASV RLLKE+L LS TV+
Sbjct: 312 DEVKASVGRLLKEVLRLSETVA 330

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BLAST of Cucsa.057840 vs. TrEMBL
Match: A0A068UEH4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.9e-60
Identity = 116/224 (51.79%), Postives = 160/224 (71.43%), Query Frame = 1


Query: 60  REAANSDGSVKSQEGK--GRNEETVLKGKVGSEGNKK------LTREDALLRKQLSPDME 119
           +E  + +  + + E K  G +  ++   K G +  KK      L  ED  + K+LSPDME
Sbjct: 130 KEGVHKNEGLSNYEEKSGGSSLSSLFANKFGRDDGKKMKDLKELRMEDPEVYKELSPDME 189

Query: 120 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 179
           MFV HLY  GY   +NFLP N+  +S FE  + RDFIK AA++FG DNQEIAKW+SGSDL
Sbjct: 190 MFVTHLYNNGYLKVSNFLPRNRLDISCFENSYARDFIKFAAEQFGMDNQEIAKWMSGSDL 249

Query: 180 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 239
           +K+A FGCPS  +K VF+AKRLR+FF+IQE+TVC KC+L+QSCK+VNQ +W  +  NL++
Sbjct: 250 KKLALFGCPSPGKKIVFSAKRLRRFFKIQENTVCDKCVLKQSCKFVNQSIWRSNDNNLDM 309

Query: 240 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVS 276
            VV+++ T YALE+ P QL++P+++KA+V RLLKE +NLS TV+
Sbjct: 310 AVVMRIITSYALESGPPQLVVPDEIKATVRRLLKEAVNLSQTVA 353

[Close]

BLAST of Cucsa.057840 vs. TrEMBL
Match: K4CXS3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-59
Identity = 125/219 (57.08%), Postives = 159/219 (72.60%), Query Frame = 1


Query: 61  EAANSDGSVKSQEGKGRN-EETVLKGKVGSEGNKK---LTREDALLRKQLSPDMEMFVRH 120
           EA N DG V   EGK +   E  +  +V S  ++K   L+ ED  + K+LSPDM MFV H
Sbjct: 136 EAGNGDG-VSENEGKSKKLHELFMNEEVRSVKSRKSTPLSMEDHTVFKELSPDMVMFVTH 195

Query: 121 LYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAF 180
           LY EGYF  +NFLP  KF ++ FE  + RDF+K AA +FGRD+QEIAKWLSGSDL+KVA 
Sbjct: 196 LYNEGYFKDSNFLPRKKFDITCFENSYARDFVKCAADQFGRDHQEIAKWLSGSDLKKVAL 255

Query: 181 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQ 240
           FGCPS A+K+V +AK LR +FRIQED+VC KC L+ SCK+VNQ +      NL+L VV++
Sbjct: 256 FGCPSIAKKNVLSAKMLRTYFRIQEDSVCSKCALKASCKFVNQNLRKSVMTNLHLAVVMR 315

Query: 241 VTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVS 276
           V T YALE++P QL+IP+++KASVSRLL +IL LS TVS
Sbjct: 316 VITLYALESVPPQLVIPDEIKASVSRLLMDILRLSKTVS 353

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BLAST of Cucsa.057840 vs. TAIR10
Match: AT1G53460.1 (AT1G53460.1 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2))

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-48
Identity = 97/208 (46.63%), Postives = 135/208 (64.90%), Query Frame = 1


Query: 69  VKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLR--KQLSPDMEMFVRHLYQEGYFNYA 128
           +  Q  K  N   + KG    E  K    ++ ++R  K+L  +M  FVR L++EGY N A
Sbjct: 102 ISEQNEKRHNLYKLFKGDEEKEVKKHSKEKEDVIRVYKELPIEMVSFVRLLHKEGYLNKA 161

Query: 129 NFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKD 188
           NF+   K  +   +  + R F+K AA+RFG+D QEIAKWLSGSDL+K+  FGCPS  ++ 
Sbjct: 162 NFITGEKLDMGNLDEEYARTFVKFAAERFGKDYQEIAKWLSGSDLKKIVLFGCPSLEKRA 221

Query: 189 VFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQYALEAI 248
           VFAAK LR FF I E+ VC KC+L++ CK+ NQ VW+  TK+L+L VV++V T Y L+  
Sbjct: 222 VFAAKTLRNFFDIHENNVCEKCVLKEKCKFPNQSVWDGKTKHLHLSVVMKVITLYPLDLT 281

Query: 249 PEQLIIPEDVKASVSRLLKEILNLSPTV 275
             +L +P++V+ SVSRLL EI NLS T+
Sbjct: 282 HPKLQVPQEVQDSVSRLLTEIQNLSRTI 309

[Close]

BLAST of Cucsa.057840 vs. TAIR10
Match: AT1G70650.1 (AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 9.6e-09
Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = 1


Query: 117 LYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAF 176
           L ++GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 177 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSC-KYVNQGVWNEDTKNLNLGVVL 236
            GCPST RK V + KRLR +  I E  VC  C LR  C +   Q   +E  + ++   V+
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 237 QVTTQYALEAI----PEQLIIPEDVKASVSRLLKEILNLSPT 274
           ++   Y L++I      +    + V+ SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLT 205

[Close]

BLAST of Cucsa.057840 vs. NCBI nr
Match: gi|449456697|ref|XP_004146085.1| (PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus])

HSP 1 Score: 558.1 bits (1437), Expect = 8.4e-156
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1


Query: 1   MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR 60
           MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR
Sbjct: 1   MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR 60

Query: 61  EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE 120
           EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE
Sbjct: 61  EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE 120

Query: 121 GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCP 180
           GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCP
Sbjct: 121 GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCP 180

Query: 181 STARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQ 240
           STARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQ
Sbjct: 181 STARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQ 240

Query: 241 YALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 278
           YALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN
Sbjct: 241 YALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

[Close]

BLAST of Cucsa.057840 vs. NCBI nr
Match: gi|659127557|ref|XP_008463764.1| (PREDICTED: uncharacterized protein LOC103501830 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 143/167 (85.63%), Postives = 149/167 (89.22%), Query Frame = 1


Query: 1   MSRFRPLHSQIQLFNSQSTISLQFHLLPSTSRSFSLNIGERIAPEIVPGNRNTPPPFLCR 60
           MSRFRPL+SQI LFNSQSTISLQFHLLPSTSRSFSL IGE I PEIVP   NTPP FL R
Sbjct: 1   MSRFRPLYSQILLFNSQSTISLQFHLLPSTSRSFSLKIGEGIEPEIVPAKTNTPPAFLSR 60

Query: 61  EAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQE 120
           EAANS+GSVKS EGKG NEETVLKGKVGSEGNKKL REDALLRK+LSPDMEMF RHLY+E
Sbjct: 61  EAANSNGSVKSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPDMEMFARHLYRE 120

Query: 121 GYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLS 168
           GYFNYANFLP NKFVLSYFECR GR+FIKS AQRFGRDNQEIA  +S
Sbjct: 121 GYFNYANFLPVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIANCVS 167

[Close]

BLAST of Cucsa.057840 vs. NCBI nr
Match: gi|698470249|ref|XP_009783767.1| (PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris])

HSP 1 Score: 247.3 bits (630), Expect = 3.2e-62
Identity = 129/234 (55.13%), Postives = 165/234 (70.51%), Query Frame = 1


Query: 47  VPGNRNTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGK-----VGSEGNKKLTREDAL 106
           V   ++TP   L  EA + +G V   EGK +    +   +     V S  +  LT ED  
Sbjct: 163 VKSRKSTP---LTMEARSGNG-VCENEGKSKKLHELFVNEKDNKSVKSRKSTPLTMEDHN 222

Query: 107 LRKQLSPDMEMFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQE 166
           + K+LSPDM MFV HLY EGYF  +NFLP  +F ++ FE  + RDF+K AA++FGRD+QE
Sbjct: 223 VYKELSPDMVMFVTHLYNEGYFKDSNFLPRKRFDITCFESSYARDFVKYAAEQFGRDHQE 282

Query: 167 IAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGV 226
           IAKWLSGSDL+ VA FGCPS A+K VF+AKRLR +FRIQED VC KC L+ SCK+VNQ V
Sbjct: 283 IAKWLSGSDLKNVALFGCPSVAKKTVFSAKRLRTYFRIQEDNVCRKCALKASCKFVNQSV 342

Query: 227 WNEDTKNLNLGVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVS 276
           W  D  NL+L VV++V T YALE++P QL+IP+++KASVSRLLK+I+ LS TVS
Sbjct: 343 WKGDMTNLHLAVVMRVITLYALESVPPQLVIPDEIKASVSRLLKDIVRLSQTVS 392

[Close]

BLAST of Cucsa.057840 vs. NCBI nr
Match: gi|697178097|ref|XP_009598028.1| (PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis])

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 125/218 (57.34%), Postives = 157/218 (72.02%), Query Frame = 1


Query: 63  ANSDGSVKSQEGKGRNEETVLKGK-----VGSEGNKKLTREDALLRKQLSPDMEMFVRHL 122
           A S   V   EGK +    +   +     V S  +  LT ED  + K+LSPDM MFV HL
Sbjct: 179 ARSGNWVCENEGKSKTLHELFVNEKENKSVKSRKSTPLTMEDHNVYKELSPDMVMFVTHL 238

Query: 123 YQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFF 182
           Y EGYF  +NFLP  +F ++ FE  + RDF+K AA++FGRD+QEIAKWLSGSDL+KVA F
Sbjct: 239 YNEGYFKDSNFLPRKRFDITCFENSYARDFVKYAAEQFGRDHQEIAKWLSGSDLKKVALF 298

Query: 183 GCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQV 242
           GCPS A+K VF+AKRLR +FRIQED VC KC L+ SCK+VNQ VW  D  NL+L VV++V
Sbjct: 299 GCPSIAKKTVFSAKRLRTYFRIQEDNVCSKCALKASCKFVNQSVWKGDMTNLHLAVVMRV 358

Query: 243 TTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVS 276
            T YALE++P QL+IP+++KASVSRLLK+I+ LS TVS
Sbjct: 359 ITLYALESVPPQLVIPDEIKASVSRLLKDIVRLSQTVS 396

[Close]

BLAST of Cucsa.057840 vs. NCBI nr
Match: gi|565388537|ref|XP_006360032.1| (PREDICTED: uncharacterized protein LOC102580802 [Solanum tuberosum])

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60
Identity = 127/219 (57.99%), Postives = 160/219 (73.06%), Query Frame = 1


Query: 61  EAANSDGSVKSQEGKGRN-EETVLKGKVGSEGNKKL---TREDALLRKQLSPDMEMFVRH 120
           EA N DG V   EGK +   E  +  +V S  ++KL   + ED  + K+LSPDM MFV H
Sbjct: 135 EAGNGDG-VSENEGKSKKLHELFMNEEVRSVKSRKLMPLSMEDHTVFKELSPDMVMFVTH 194

Query: 121 LYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAF 180
           LY EGYF  +NFLP  KF +S FE  + RDF+K AA++FGRD+QEIAKWLSGSDL+KVA 
Sbjct: 195 LYNEGYFKDSNFLPRKKFDISCFENSYARDFVKYAAEQFGRDHQEIAKWLSGSDLKKVAL 254

Query: 181 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQ 240
           FGCPS A+K+V +AKRLR +FRIQED VC KC L+ SCK+VNQ +   D  NL+L  V++
Sbjct: 255 FGCPSIAKKNVLSAKRLRTYFRIQEDNVCSKCALKVSCKFVNQNLRKGDMTNLHLAGVMR 314

Query: 241 VTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVS 276
           V T YALE++P QL+IP+++KASVSRLL +IL LS TVS
Sbjct: 315 VITLYALESVPPQLVIPDEIKASVSRLLMDILRLSQTVS 352

The following BLAST results are available for this feature:

BLAST of Cucsa.057840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4J9_CUCSA	5.9e-156	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625010 PE=4 SV=1	[more]
A5B447_VITVI	3.5e-60	58.42	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008358 PE=4 SV=1	[more]
E0CS68_VITVI	3.5e-60	58.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00970 PE=4 SV=...	[more]
A0A068UEH4_COFCA	7.9e-60	51.79	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021383001 PE=4 SV=1	[more]
K4CXS3_SOLLC	1.0e-59	57.08	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Cucsa.057840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53460.1	2.8e-48	46.63	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-...	[more]
AT1G70650.1	9.6e-09	30.86	Ran BP2/NZF zinc finger-like superfamily protein	[more]

BLAST of Cucsa.057840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456697\|ref\|XP_004146085.1\|	8.4e-156	100.00	PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus]	[more]
gi\|659127557\|ref\|XP_008463764.1\|	4.0e-73	85.63	PREDICTED: uncharacterized protein LOC103501830 [Cucumis melo]	[more]
gi\|698470249\|ref\|XP_009783767.1\|	3.2e-62	55.13	PREDICTED: uncharacterized protein LOC104232295 [Nicotiana sylvestris]	[more]
gi\|697178097\|ref\|XP_009598028.1\|	1.2e-61	57.34	PREDICTED: uncharacterized protein LOC104093903 [Nicotiana tomentosiformis]	[more]
gi\|565388537\|ref\|XP_006360032.1\|	1.7e-60	57.99	PREDICTED: uncharacterized protein LOC102580802 [Solanum tuberosum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.057840.1	Cucsa.057840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 71..275 score: 2.9
None	No IPR available	PANTHER	PTHR23111:SF24	SUBFAMILY NOT NAMED	coord: 71..275 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.057840	Cla023315	Watermelon (97103) v1	cgywmB047
Cucsa.057840	Csa4G625010	Cucumber (Chinese Long) v2	cgycuB042
Cucsa.057840	MELO3C025659	Melon (DHL92) v3.5.1	cgymeB042
Cucsa.057840	ClCG11G017270	Watermelon (Charleston Gray)	cgywcgB047
Cucsa.057840	CSPI04G22680	Wild cucumber (PI 183967)	cgycpiB043
Cucsa.057840	CmaCh09G006700	Cucurbita maxima (Rimu)	cgycmaB0076
Cucsa.057840	CmoCh09G006530	Cucurbita moschata (Rifu)	cgycmoB0071
Cucsa.057840	Lsi04G019930	Bottle gourd (USVL1VR-Ls)	cgylsiB047
Cucsa.057840	Cp4.1LG06g05210	Cucurbita pepo (Zucchini)	cgycpeB0074
Cucsa.057840	MELO3C025659.2	Melon (DHL92) v3.6.1	cgymedB042
Cucsa.057840	CsaV3_4G032920	Cucumber (Chinese Long) v3	cgycucB045
Cucsa.057840	Cla97C11G223380	Watermelon (97103) v2	cgywmbB046
Cucsa.057840	Bhi09G002889	Wax gourd	cgywgoB048
Cucsa.057840	Carg03077	Silver-seed gourd	carcgyB0705

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.057840	Cucurbita moschata (Rifu)	cgycmoB0073
Cucsa.057840	Cucumber (Chinese Long) v2	cgycuB043
Cucsa.057840	Cucurbita pepo (Zucchini)	cgycpeB0073
Cucsa.057840	Silver-seed gourd	carcgyB0363
Cucsa.057840	Cucurbita maxima (Rimu)	cgycmaB0078