CmaCh05G001980 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAATCTTGCTTCTCCAATATGGGCGTCTTTTATCAAGAAGACCCACCAAATCCTTCAAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGTACTCTGCAACTGTCATACTTTTGGCAAACCACAGCCAAATTCCAACGCAGAGGATGACTATCCAACGAGTGACTTTGATGATGAAGAGGAAGTATTCACTCACCAACTTATCCTCGCATATCAACAGATATAATAACCTTTTGTTTACTCTTTCACCTTATATGAAATCTGTTTCTCTAAGTTTCTTATCTATTTCTCAGGAAATTGTATCGGAAATCAGAAGTCGGGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAACCTGGAAATGAAGATAACACAGGAGATGAGTTCTACTCTGTTCAGAGTTTTCTCACATGTTCAAGTGCTGCAACAAAGGAAGCATTCTTTTCCGTAGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTGGATGAAGATCTCAAGAGGCGCACCATCTTACAGGAATTGTTTCATTGTGAAGGATGGCCGTTTGGTCTTTGCAGGAAAGCGGCGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTGAAGATATGATGTCCAAATTCGGTGCTAAGTTCTGTTTTTTTGTATTTTGCTGCTGCCAGAAGTAACGTTGAGATTGAAGAGTAAAACGTGGCTCCTCTTAGTAACAAAATTCTTCAAGCTATTGATCTGATTAAAAACAATTTTCAACTCTTCTTCACCTCATAAACCCTCTTAAATTAATTACCGC AGAAAATCTTGCTTCTCCAATATGGGCGTCTTTTATCAAGAAGACCCACCAAATCCTTCAAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGTACTCTGCAACTGTCATACTTTTGGCAAACCACAGCCAAATTCCAACGCAGAGGATGACTATCCAACGAGTGACTTTGATGATGAAGAGGAAGAAATTGTATCGGAAATCAGAAGTCGGGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAACCTGGAAATGAAGATAACACAGGAGATGAGTTCTACTCTGTTCAGAGTTTTCTCACATGTTCAAGTGCTGCAACAAAGGAAGCATTCTTTTCCGTAGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTGGATGAAGATCTCAAGAGGCGCACCATCTTACAGGAATTGTTTCATTGTGAAGGATGGCCGTTTGGTCTTTGCAGGAAAGCGGCGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTGAAGATATGATGTCCAAATTCGGTGCTAAGTTCTGTTTTTTTGTATTTTGCTGCTGCCAGAAGTAACGTTGAGATTGAAGAGTAAAACGTGGCTCCTCTTAGTAACAAAATTCTTCAAGCTATTGATCTGATTAAAAACAATTTTCAACTCTTCTTCACCTCATAAACCCTCTTAAATTAATTACCGC ATGGGCGTCTTTTATCAAGAAGACCCACCAAATCCTTCAAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGTACTCTGCAACTGTCATACTTTTGGCAAACCACAGCCAAATTCCAACGCAGAGGATGACTATCCAACGAGTGACTTTGATGATGAAGAGGAAGAAATTGTATCGGAAATCAGAAGTCGGGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAACCTGGAAATGAAGATAACACAGGAGATGAGTTCTACTCTGTTCAGAGTTTTCTCACATGTTCAAGTGCTGCAACAAAGGAAGCATTCTTTTCCGTAGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTGGATGAAGATCTCAAGAGGCGCACCATCTTACAGGAATTGTTTCATTGTGAAGGATGGCCGTTTGGTCTTTGCAGGAAAGCGGCGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTGAAGATATGA MGVFYQEDPPNPSRKCFLAGALKDVLCNCHTFGKPQPNSNAEDDYPTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMDEPGNEDNTGDEFYSVQSFLTCSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCRKAALLPPLPKSPSESWLWSKGTKIVKI
BLAST of CmaCh05G001980 vs. TrEMBL
Match: A0A0A0LRD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 5.5e-103 Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 1
BLAST of CmaCh05G001980 vs. TrEMBL
Match: A0A061FAY9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60 Identity = 122/210 (58.10%), Postives = 155/210 (73.81%), Query Frame = 1
BLAST of CmaCh05G001980 vs. TrEMBL
Match: W9QPV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59 Identity = 121/207 (58.45%), Postives = 154/207 (74.40%), Query Frame = 1
BLAST of CmaCh05G001980 vs. TrEMBL
Match: B9GNX6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58 Identity = 124/210 (59.05%), Postives = 153/210 (72.86%), Query Frame = 1
BLAST of CmaCh05G001980 vs. TrEMBL
Match: B9R7F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57 Identity = 124/211 (58.77%), Postives = 153/211 (72.51%), Query Frame = 1
BLAST of CmaCh05G001980 vs. TAIR10
Match: AT1G47410.1 (AT1G47410.1 unknown protein) HSP 1 Score: 114.8 bits (286), Expect = 6.3e-26 Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 1
BLAST of CmaCh05G001980 vs. NCBI nr
Match: gi|449470182|ref|XP_004152797.1| (PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 7.8e-103 Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 1
BLAST of CmaCh05G001980 vs. NCBI nr
Match: gi|659087790|ref|XP_008444637.1| (PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo]) HSP 1 Score: 375.9 bits (964), Expect = 4.3e-101 Identity = 181/202 (89.60%), Postives = 186/202 (92.08%), Query Frame = 1
BLAST of CmaCh05G001980 vs. NCBI nr
Match: gi|1009136424|ref|XP_015885517.1| (PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba]) HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63 Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 1
BLAST of CmaCh05G001980 vs. NCBI nr
Match: gi|590592490|ref|XP_007017295.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 239.6 bits (610), Expect = 4.8e-60 Identity = 122/210 (58.10%), Postives = 155/210 (73.81%), Query Frame = 1
BLAST of CmaCh05G001980 vs. NCBI nr
Match: gi|703082889|ref|XP_010092069.1| (hypothetical protein L484_003373 [Morus notabilis]) HSP 1 Score: 237.3 bits (604), Expect = 2.4e-59 Identity = 121/207 (58.45%), Postives = 154/207 (74.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |