Csa2G360040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G360040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 16980947 .. 16981828 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAACCAACCAGAAAATCTTGCTTCTCCAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTAGAAAACCACTGCCAAAGTTTAACGATGAGGACGATTATCCTACAAGTGACTTTGATGATACAGAGGAAGTACTCACCAACTTATCCTCGTGTCACATATCTACAGATATTGTAACCTTTTGTTTCTATTTCCTATTATATGAAAATTGTTTCTCAGTTTCGATCTACTTCTCAACTCTCAGGAAATTGTATCAGAAATCAGAACTCGAGCAATGGAAAAGTTGAAACGAAAGACTAACCTGTCAGACAGCTTCTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAATCTGGAAATGAAGATAACATGGGAGATGAGTTCTACTCTGTTCGGAGTTTTCTCACGTGTTGTTCAACTGCAGCAACAAATGAAGCCTTCTTTTCTGTGGAAGCCAACTTTTCCCGATGTTCAAGCTTAAATGGTCTTAATTTTCTAGATGAGGATCTCAAGAGACGCACCATCTTGCAGGAAGTTTTTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCAGTCTTACTTCCGCCACTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGATGTCCAGATTTGGAGCTAAACTCTGTTTTTGTACTTTCTTGGTAACAAAACTCATCAAGTTATTTGATCTGATTAATTCCAACTACACAAATTACTTCATAAACATTTGTTTTAACCCTCTA

mRNA sequence

ATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTAGAAAACCACTGCCAAAGTTTAACGATGAGGACGATTATCCTACAAGTGACTTTGATGATACAGAGGAAGAAATTGTATCAGAAATCAGAACTCGAGCAATGGAAAAGTTGAAACGAAAGACTAACCTGTCAGACAGCTTCTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAATCTGGAAATGAAGATAACATGGGAGATGAGTTCTACTCTGTTCGGAGTTTTCTCACGTGTTGTTCAACTGCAGCAACAAATGAAGCCTTCTTTTCTGTGGAAGCCAACTTTTCCCGATGTTCAAGCTTAAATGGTCTTAATTTTCTAGATGAGGATCTCAAGAGACGCACCATCTTGCAGGAAGTTTTTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCAGTCTTACTTCCGCCACTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGA

Coding sequence (CDS)

ATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTAGAAAACCACTGCCAAAGTTTAACGATGAGGACGATTATCCTACAAGTGACTTTGATGATACAGAGGAAGAAATTGTATCAGAAATCAGAACTCGAGCAATGGAAAAGTTGAAACGAAAGACTAACCTGTCAGACAGCTTCTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATGGATGAATCTGGAAATGAAGATAACATGGGAGATGAGTTCTACTCTGTTCGGAGTTTTCTCACGTGTTGTTCAACTGCAGCAACAAATGAAGCCTTCTTTTCTGTGGAAGCCAACTTTTCCCGATGTTCAAGCTTAAATGGTCTTAATTTTCTAGATGAGGATCTCAAGAGACGCACCATCTTGCAGGAAGTTTTTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCAGTCTTACTTCCGCCACTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGA

Protein sequence

MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSEIRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWLWSKGTKIVKTY*
Homology
[Close]
BLAST of Csa2G360040 vs. TrEMBL
Match: A0A0A0LRD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-117
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120
           IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180
           TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVKTY 205
           LPPLPKSPSESWLWSKGTKIVKTY
Sbjct: 181 LPPLPKSPSESWLWSKGTKIVKTY 204

[Close]
BLAST of Csa2G360040 vs. TrEMBL
Match: A0A061FAY9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60
Identity = 121/211 (57.35%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           M VFYQE+ P  S++C FLA  LK+AF NCH F         E++YPTSD DD  E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 61  EIRTRAMEKLKRKTNLS-DSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRS 120
           EIR+RAMEK+KR+ +L+ ++ SWVFSP+T EL+ITS   ++ D+  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 121 FLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLD------EDLKRRTILQEVFHCEGWPF 180
             + CS+A + EAF S +ANFSRCSSLN ++F D      +D +RR+I+QE  HCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVKT 204
           GLCRKAVLLPPLPKSPSESW W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWRKGTRLAKT 207

[Close]
BLAST of Csa2G360040 vs. TrEMBL
Match: W9QPV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 119/206 (57.77%), Postives = 154/206 (74.76%), Query Frame = 1 

Query: 1   MGVFY-QEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIV 60
           M +FY +E+P NPS++C FLA  LKDAF NCH F   L   N +++YPTSDFD+ +E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 61  SEIRTRAMEKLKRKTNL--SDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSV 120
           S IR+ A+EKL+RK  L  SDSFSWV+S  T+ELYIT   IE+ ++    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 121 RSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCR 180
           +S  +CCS+AA+ + F SV+++FSR SSLNG++   ++ +RR+I+QE  HCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVK 203
           KAVLLPPLPKSPSESW W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWSWRKGTKTAK 204

[Close]
BLAST of Csa2G360040 vs. TrEMBL
Match: B9R7F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 123/210 (58.57%), Postives = 155/210 (73.81%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           MGVF+ EDPP P +KC FLA ALKDAF NC T R+ L   + E+++PTSD DD +E IVS
Sbjct: 1   MGVFHHEDPPTPPKKCKFLAAALKDAFSNCSTCRR-LSISSPEEEHPTSDIDDEQELIVS 60

Query: 61  EIRTRAMEKLKRKTN-LSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDE------ 120
            IR+RAMEK + ++  L+DSFSWVFSP T ELY+     ++ D+ G+++N  DE      
Sbjct: 61  AIRSRAMEKSRNRSFVLTDSFSWVFSPRTGELYLAPKIFQQKDDDGDDENNDDEDDEREE 120

Query: 121 FYSVRSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPF 180
           F SV S  +CCS+A + EAF S++ NFSRCSSL+ +  + +D  RR+IL+E  HCEGWPF
Sbjct: 121 FLSVGSCFSCCSSALSKEAFVSMKTNFSRCSSLSDVLEI-KDFPRRSILEEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVK 203
           GLCRKAVLLPPLPKSPSESW WSKG+KIVK
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWSKGSKIVK 208

[Close]
BLAST of Csa2G360040 vs. TrEMBL
Match: B9GNX6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-58
Identity = 119/209 (56.94%), Postives = 150/209 (71.77%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           MGVF+ E+ PNPS+KC FLA  LKD F NC T    +   + E++YPT+D DD +E IVS
Sbjct: 1   MGVFHHEEAPNPSKKCKFLAATLKDVFSNCSTCGGRISTSSPEEEYPTADVDDEQEVIVS 60

Query: 61  EIRTRAMEKLKRKTNL-SDSFSWVFSPATKELYITSMEIEKMDESGNEDN-----MGDEF 120
           EIR+RAMEKL+ K  + +DSFSWV+SP T EL++T   +++ D+ GN+DN       +EF
Sbjct: 61  EIRSRAMEKLRHKPFIFTDSFSWVYSPKTGELFVTPKAVQQKDD-GNDDNDEYDDTREEF 120

Query: 121 YSVRSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFG 180
           +SV S L+CCS+A + EAF S + NFSRCSS N   F   D  +R+ILQE  HC+GWPFG
Sbjct: 121 FSVGSCLSCCSSALSREAFVSAKPNFSRCSSFN--EFCFPDFPKRSILQEFCHCQGWPFG 180

Query: 181 LCRKAVLLPPLPKSPSESWLWSKGTKIVK 203
           L RKAVLLPPLPKSPSESW W KG +IVK
Sbjct: 181 LWRKAVLLPPLPKSPSESWSWRKGARIVK 206

[Close]
BLAST of Csa2G360040 vs. TAIR10
Match: AT1G47410.1 (AT1G47410.1 unknown protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 68/169 (40.24%), Postives = 95/169 (56.21%), Query Frame = 1 

Query: 41  DEDDYPTSDFDDTEEEIVSEIRTRAMEKLKRKTNLS-DSFSWVFSPATKELYITSMEIEK 100
           D+D+ P  DFD   E +V EIR+RAMEKL++K     +  ++ F        +   +IE 
Sbjct: 35  DDDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKRRTGMEGLTYKF--------VKEYDIE- 94

Query: 101 MDESGNEDNMGDEFYSVRS-FLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDE----- 160
                      +EF SVRS F  CC +  + E + + +  FSR SSL GL   ++     
Sbjct: 95  -----------NEFCSVRSSFSECCMSDISIEGYMTAKTEFSRSSSLKGLELENQWKMHY 154

Query: 161 --DLKRRTILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWLWSKGTKI 201
             ++K+ +++QE  HC+GWPFGL RKA LLPPLPKSP+ESW W K T++
Sbjct: 155 VNEIKKGSVIQEFCHCQGWPFGLGRKAALLPPLPKSPAESWSWRKPTRV 183

[Close]
BLAST of Csa2G360040 vs. NCBI nr
Match: gi|449470182|ref|XP_004152797.1| (PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 3.3e-117
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120
           IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180
           TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVKTY 205
           LPPLPKSPSESWLWSKGTKIVKTY
Sbjct: 181 LPPLPKSPSESWLWSKGTKIVKTY 204

[Close]
BLAST of Csa2G360040 vs. NCBI nr
Match: gi|659087790|ref|XP_008444637.1| (PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.5e-114
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAG LKDAFCNCHTFRKPLPKFNDED+YPTSDFDDTEEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGVLKDAFCNCHTFRKPLPKFNDEDEYPTSDFDDTEEEIVSE 60

Query: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120
           IRTRAMEKLKRK NLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKANLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVQSFL 120

Query: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180
           TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVKTY 205
           LPPLPKSPSESW WSKGTKIVKTY
Sbjct: 181 LPPLPKSPSESWSWSKGTKIVKTY 204

[Close]
BLAST of Csa2G360040 vs. NCBI nr
Match: gi|1009136424|ref|XP_015885517.1| (PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba])

HSP 1 Score: 245.4 bits (625), Expect = 8.9e-62
Identity = 122/206 (59.22%), Postives = 155/206 (75.24%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           M +FY E+ P PS++C FLA  LKD F NCHTF   +     ++D P SDFDD +E +VS
Sbjct: 1   MSIFYHEESPIPSKRCKFLAACLKDVFSNCHTFGDRVSTSIPDEDLPPSDFDDEQEVVVS 60

Query: 61  EIRTRAMEKLKRK-TNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRS 120
            IR+RAMEKL++K  NL+DSFSWV+SP T+ELYIT   +E+ +E G     G+EF SV+S
Sbjct: 61  AIRSRAMEKLRKKPNNLTDSFSWVYSPITRELYITPKGVEQKEEDG-----GEEFVSVKS 120

Query: 121 FLTC--CSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCR 180
             +C  CS+AA+ +AF SV+ +FSR  SLNGL F+D   +RR+I+QE+ HCEGWPFGLCR
Sbjct: 121 CFSCSCCSSAASRDAFLSVKTSFSRTPSLNGLEFID--FQRRSIIQELCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVK 203
           KAVLLPPLPKSPSESW WSKGTKI++
Sbjct: 181 KAVLLPPLPKSPSESWSWSKGTKIIR 199

[Close]
BLAST of Csa2G360040 vs. NCBI nr
Match: gi|590592490|ref|XP_007017295.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 239.6 bits (610), Expect = 4.9e-60
Identity = 121/211 (57.35%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVS 60
           M VFYQE+ P  S++C FLA  LK+AF NCH F         E++YPTSD DD  E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 61  EIRTRAMEKLKRKTNLS-DSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRS 120
           EIR+RAMEK+KR+ +L+ ++ SWVFSP+T EL+ITS   ++ D+  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 121 FLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLD------EDLKRRTILQEVFHCEGWPF 180
             + CS+A + EAF S +ANFSRCSSLN ++F D      +D +RR+I+QE  HCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVKT 204
           GLCRKAVLLPPLPKSPSESW W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWRKGTRLAKT 207

[Close]
BLAST of Csa2G360040 vs. NCBI nr
Match: gi|703082889|ref|XP_010092069.1| (hypothetical protein L484_003373 [Morus notabilis])

HSP 1 Score: 239.2 bits (609), Expect = 6.4e-60
Identity = 119/206 (57.77%), Postives = 154/206 (74.76%), Query Frame = 1 

Query: 1   MGVFY-QEDPPNPSRKC-FLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIV 60
           M +FY +E+P NPS++C FLA  LKDAF NCH F   L   N +++YPTSDFD+ +E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 61  SEIRTRAMEKLKRKTNL--SDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSV 120
           S IR+ A+EKL+RK  L  SDSFSWV+S  T+ELYIT   IE+ ++    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 121 RSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCR 180
           +S  +CCS+AA+ + F SV+++FSR SSLNG++   ++ +RR+I+QE  HCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVK 203
           KAVLLPPLPKSPSESW W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWSWRKGTKTAK 204

The following BLAST results are available for this feature:
BLAST of Csa2G360040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRD5_CUCSA2.3e-117100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1[more]
A0A061FAY9_THECC3.4e-6057.35Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1[more]
W9QPV8_9ROSA4.4e-6057.77Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1[more]
B9R7F5_RICCO2.2e-5958.57Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1[more]
B9GNX6_POPTR5.4e-5856.94Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1[more]
BLAST of Csa2G360040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47410.11.5e-2740.24 unknown protein[more]
BLAST of Csa2G360040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470182|ref|XP_004152797.1|3.3e-117100.00PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus][more]
gi|659087790|ref|XP_008444637.1|1.5e-11497.55PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo][more]
gi|1009136424|ref|XP_015885517.1|8.9e-6259.22PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba][more]
gi|590592490|ref|XP_007017295.1|4.9e-6057.35Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|703082889|ref|XP_010092069.1|6.4e-6057.77hypothetical protein L484_003373 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0045491 xylan metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU127747cucumber EST collection version 3.0transcribed_cluster
CU143493cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G360040.1Csa2G360040.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU143493CU143493transcribed_cluster
CU127747CU127747transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36324FAMILY NOT NAMEDcoord: 1..202
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G360040Cla022552Watermelon (97103) v1cuwmB111
Csa2G360040MELO3C010885Melon (DHL92) v3.5.1cumeB117
Csa2G360040ClCG08G015710Watermelon (Charleston Gray)cuwcgB169
Csa2G360040Lsi08G014530Bottle gourd (USVL1VR-Ls)culsiB142
Csa2G360040MELO3C010885.2Melon (DHL92) v3.6.1cumedB114
Csa2G360040Cla97C08G159290Watermelon (97103) v2cuwmbB163
Csa2G360040Bhi04G000295Wax gourdcuwgoB162
Csa2G360040CSPI02G19380Wild cucumber (PI 183967)cpicuB065
Csa2G360040Cucsa.232710Cucumber (Gy14) v1cgycuB326
Csa2G360040CmaCh05G001980Cucurbita maxima (Rimu)cmacuB784
Csa2G360040CmaCh12G005230Cucurbita maxima (Rimu)cmacuB174
Csa2G360040CmoCh12G004640Cucurbita moschata (Rifu)cmocuB158
Csa2G360040CmoCh05G001970Cucurbita moschata (Rifu)cmocuB777
Csa2G360040Cp4.1LG07g04540Cucurbita pepo (Zucchini)cpecuB819
Csa2G360040Cp4.1LG11g01650Cucurbita pepo (Zucchini)cpecuB096
Csa2G360040CsGy2G019250Cucumber (Gy14) v2cgybcuB057
Csa2G360040Carg11839Silver-seed gourdcarcuB0202
Csa2G360040Carg25833Silver-seed gourdcarcuB0299
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G360040Cucurbita moschata (Rifu)cmocuB424
Csa2G360040Melon (DHL92) v3.5.1cumeB149
Csa2G360040Watermelon (Charleston Gray)cuwcgB140
Csa2G360040Watermelon (97103) v1cuwmB126
Csa2G360040Cucurbita pepo (Zucchini)cpecuB539
Csa2G360040Cucurbita pepo (Zucchini)cpecuB771
Csa2G360040Bottle gourd (USVL1VR-Ls)culsiB117
Csa2G360040Cucumber (Gy14) v2cgybcuB160
Csa2G360040Cucumber (Gy14) v2cgybcuB297
Csa2G360040Melon (DHL92) v3.6.1cumedB141
Csa2G360040Silver-seed gourdcarcuB0110
Csa2G360040Silver-seed gourdcarcuB0788
Csa2G360040Watermelon (97103) v2cuwmbB135
Csa2G360040Wax gourdcuwgoB198
Csa2G360040Cucumber (Chinese Long) v2cucuB062
Csa2G360040Cucumber (Chinese Long) v2cucuB079
Csa2G360040Cucumber (Gy14) v1cgycuB162
Csa2G360040Cucurbita maxima (Rimu)cmacuB011
Csa2G360040Cucurbita maxima (Rimu)cmacuB437
Csa2G360040Cucurbita moschata (Rifu)cmocuB002