Cp4.1LG07g04540 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g04540
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaA10g05150D protein
LocationCp4.1LG07 : 2997290 .. 2999218 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACTGAGTTATAGATTTGCTGTTCTAGATTTTCCAAAAGCCAGTTTTGATATCAATTTCTAAGTTCTCTTTGAATCGATACTTTGGTTCAACATCAAGTTTGATTAAAAGAAAAAGAAAATCAAGCCACTTTATCTACTTATACCCAGTAGTACTGAATAAGAACAGTTAAAAACCGATCAACTCATTTAAAAGGAGAAAACTTTATACGTAAACAGCATACCAGATTGAGACCCGACTTTTAAAGATCGGTTGATTTGATTTCGTACTCTTCTCTCCCATGAGCTCGAACAGTGGAACTGGCCGATCTCGACAAAGTTGTCAAAAGTAGGAGATATTGGTTGGTTAAATGTCTGAAATCACCGAAATCTTGAGCATTAAGTGAGAGTCCAAATGCCTTGAAAAGTAGGTGTTAGATTAGCATATAGCATGGCCAATTAATATTCAAAGTAATGTAAAGAGAATGCAGTGTGAGCTTTCAGCTAGAATCTCTAGTGCAGTTCAACATCATTAGTTGGAGTGTCATGTGTTCCTACTTACTTTATCTTTACACCTAAGGATTAGAAAGCGTTATTTTCAATAAGCTGAGAAGGCACTGTAAGAAATGGAGCCATTTTGATCCCTAAAGTGGAGCGGCAGTAAGGTGCAATTACTTCTCTATATATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCAACTGCCATACTTTTAGCAGACAGCTACCGAATTCAAACGCAGAGGACAAATATCCTACGAGTGACTTCGACGATGAAGAGGAAGTACTCACCAGTTAATTCTTTTGTTTTCTCTTTCATCTTATATGAAATCTGTTTCTCTTAAGTTTTTTTATCTTCTTCTCAGGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGATTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTAAGTCTAGAAATGAAGATAATACAGGAGATGAGTTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCAAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCGAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCACACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAGTCGCCATCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGATGTCCAAATCCTGTGCTAAGTTTCATTTTTGTAGAGGCAATGTTGGGAGTGAAGAGTCCAACAGACCACCTCCAAGCTAGTGGTCTGATTATATCCAATTTTCACCTCTTCTTTACTTCACAAACATATGCTTTAACACTTAAGCTATTAATAACAATCACGCAGTTACTGTAGCAATAATCGGAGTTAAGGTCGACTCCTCCACAGATCACACAGAACGATATAAAACTCAGAAATGCAAAAATTTAGAAACTGACGATATAAACTTGTAGAAGAAACCGAATAATTGGTAAACAAATGAGGATGTTAAATTCTGTTTACTCATTCCTCAAGGTGAGATCTTATTCAATTGCCATTAACTCCACGGTTAATTGGTTTTGAGAGAAGATGCACAATAAAACATTGAAGAACATACACTCAAACTAACGGAAGCTTGCAATTACAGCCAAATTTATGCTCTTTGCTCGACATATGACCCTGATAGACCAGAGGTTCCCAGCACAGAAACCTGTCA

mRNA sequence

CTTACTGAGTTATAGATTTGCTGTTCTAGATTTTCCAAAAGCCAGTTTTGATATCAATTTCTAAGTTCTCTTTGAATCGATACTTTGGTTCAACATCAAGTTTGATTAAAAGAAAAAGAAAATCAAGCCACTTTATCTACTTATACCCAGTAGTACTGAATAAGAACAGTTAAAAACCGATCAACTCATTTAAAAGGAGAAAACTTTATACGTAAACAGCATACCAGATTGAGACCCGACTTTTAAAGATCGGTTGATTTGATTTCGTACTCTTCTCTCCCATGAGCTCGAACAGTGGAACTGGCCGATCTCGACAAAGTTGTCAAAAGTAGGAGATATTGGTTGGTTAAATGTCTGAAATCACCGAAATCTTGAGCATTAAGTGAGAGTCCAAATGCCTTGAAAAGTAGGTGTTAGATTAGCATATAGCATGGCCAATTAATATTCAAAGTAATGTAAAGAGAATGCAGTGTGAGCTTTCAGCTAGAATCTCTAGTGCAGTTCAACATCATTAGTTGGAGTGTCATGTGTTCCTACTTACTTTATCTTTACACCTAAGGATTAGAAAGCGTTATTTTCAATAAGCTGAGAAGGCACTGTAAGAAATGGAGCCATTTTGATCCCTAAAGTGGAGCGGCAGTAAGGTGCAATTACTTCTCTATATATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCAACTGCCATACTTTTAGCAGACAGCTACCGAATTCAAACGCAGAGGACAAATATCCTACGAGTGACTTCGACGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGATTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTAAGTCTAGAAATGAAGATAATACAGGAGATGAGTTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCAAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCGAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCACACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAGTCGCCATCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGATGTCCAAATCCTGTGCTAAGTTTCATTTTTGTAGAGGCAATGTTGGGAGTGAAGAGTCCAACAGACCACCTCCAAGCTAGTGGTCTGATTATATCCAATTTTCACCTCTTCTTTACTTCACAAACATATGCTTTAACACTTAAGCTATTAATAACAATCACGCAGTTACTGTAGCAATAATCGGAGTTAAGGTCGACTCCTCCACAGATCACACAGAACGATATAAAACTCAGAAATGCAAAAATTTAGAAACTGACGATATAAACTTGTAGAAGAAACCGAATAATTGGTAAACAAATGAGGATGTTAAATTCTGTTTACTCATTCCTCAAGGTGAGATCTTATTCAATTGCCATTAACTCCACGGTTAATTGGTTTTGAGAGAAGATGCACAATAAAACATTGAAGAACATACACTCAAACTAACGGAAGCTTGCAATTACAGCCAAATTTATGCTCTTTGCTCGACATATGACCCTGATAGACCAGAGGTTCCCAGCACAGAAACCTGTCA

Coding sequence (CDS)

ATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCAACTGCCATACTTTTAGCAGACAGCTACCGAATTCAAACGCAGAGGACAAATATCCTACGAGTGACTTCGACGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGATTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTAAGTCTAGAAATGAAGATAATACAGGAGATGAGTTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCAAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCGAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCACACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAGTCGCCATCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

Protein sequence

MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY
Homology
[Close]
BLAST of Cp4.1LG07g04540 vs. TrEMBL
Match: A0A0A0LRD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.6e-95
Identity = 172/207 (83.09%), Postives = 185/207 (89.37%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA ALKDAFCNCHTF + LP  N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RKTNLSDSFSW+FSPATKELYITSMEIEKM +S NEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFSR SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESW WS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWLWS---KGTKIVKTY 204

[Close]
BLAST of Cp4.1LG07g04540 vs. TrEMBL
Match: W9QPV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.7e-60
Identity = 123/209 (58.85%), Postives = 154/209 (73.68%), Query Frame = 1 

Query: 16  MGVFY-QEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIV 75
           M +FY +E+P NPSK+  FLAA LKDAF NCH F   L  SN +++YPTSDFD+E+E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 76  SEIRSRAMEKLRRKTNL--SDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSV 135
           S IRS A+EKLRRK  L  SDSFSW++S  T+ELYIT   IE+       D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 136 QSFLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCR 195
           +S  +CCSSAA+++ F SV+++FSR SSLNG+D   ++ +R + +QE CHCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 196 KALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           KA+ LPPLPKSPSESWS   W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWS---WRKGTKTAK 204

[Close]
BLAST of Cp4.1LG07g04540 vs. TrEMBL
Match: A0A061FAY9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-58
Identity = 121/214 (56.54%), Postives = 155/214 (72.43%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVS 75
           M VFYQE+ P  SK+  FLA+ LK+AF NCH F     +S  E++YPTSD DDE E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 76  EIRSRAMEKLRRKTNLS-DSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQS 135
           EIRSRAMEK++R+ +L+ ++ SW+FSP+T EL+ITS   ++  K  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 136 FLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVD------EDLKRHTALQELCHCEGWPF 195
             + CSSA ++EAF S +ANFSR SSLN +DF D      +D +R + +QE CHCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 196 GLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKT 222
           GLCRKA+ LPPLPKSPSESWS   W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWS---WRKGTRLAKT 207

[Close]
BLAST of Cp4.1LG07g04540 vs. TrEMBL
Match: B9GNX6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 119/211 (56.40%), Postives = 152/211 (72.04%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVS 75
           MGVF+ E+ PNPSKK  FLAA LKD F NC T   ++  S+ E++YPT+D DDE+E IVS
Sbjct: 1   MGVFHHEEAPNPSKKCKFLAATLKDVFSNCSTCGGRISTSSPEEEYPTADVDDEQEVIVS 60

Query: 76  EIRSRAMEKLRRKTNL-SDSFSWIFSPATKELYITSMEIEKM--GKSRNE--DNTGDEFY 135
           EIRSRAMEKLR K  + +DSFSW++SP T EL++T   +++   G   N+  D+T +EF+
Sbjct: 61  EIRSRAMEKLRHKPFIFTDSFSWVYSPKTGELFVTPKAVQQKDDGNDDNDEYDDTREEFF 120

Query: 136 SVQSFLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGL 195
           SV S L+CCSSA ++EAF S + NFSR SS N  +F   D  + + LQE CHC+GWPFGL
Sbjct: 121 SVGSCLSCCSSALSREAFVSAKPNFSRCSSFN--EFCFPDFPKRSILQEFCHCQGWPFGL 180

Query: 196 CRKALFLPPLPKSPSESWSWSKWNKGTKVVK 221
            RKA+ LPPLPKSPSESWS   W KG ++VK
Sbjct: 181 WRKAVLLPPLPKSPSESWS---WRKGARIVK 206

[Close]
BLAST of Cp4.1LG07g04540 vs. TrEMBL
Match: B9R7F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-56
Identity = 123/213 (57.75%), Postives = 153/213 (71.83%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVS 75
           MGVF+ EDPP P KK  FLAAALKDAF NC T  R+L  S+ E+++PTSD DDE+E IVS
Sbjct: 1   MGVFHHEDPPTPPKKCKFLAAALKDAFSNCST-CRRLSISSPEEEHPTSDIDDEQELIVS 60

Query: 76  EIRSRAMEKLRRKTN-LSDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDE------ 135
            IRSRAMEK R ++  L+DSFSW+FSP T ELY+     ++     +++N  DE      
Sbjct: 61  AIRSRAMEKSRNRSFVLTDSFSWVFSPRTGELYLAPKIFQQKDDDGDDENNDDEDDEREE 120

Query: 136 FYSVQSFLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPF 195
           F SV S  +CCSSA +KEAF S++ NFSR SSL+ +  + +D  R + L+E CHCEGWPF
Sbjct: 121 FLSVGSCFSCCSSALSKEAFVSMKTNFSRCSSLSDVLEI-KDFPRRSILEEFCHCEGWPF 180

Query: 196 GLCRKALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           GLCRKA+ LPPLPKSPSESWSWS   KG+K+VK
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWS---KGSKIVK 208

[Close]
BLAST of Cp4.1LG07g04540 vs. TAIR10
Match: AT1G47410.1 (AT1G47410.1 unknown protein)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-28
Identity = 81/200 (40.50%), Postives = 109/200 (54.50%), Query Frame = 1 

Query: 33  LAAALKDAFCNCHTFS-RQLPNSNAE---DKYPTSDFDDEEEEIVSEIRSRAMEKLRRKT 92
           +A  ++DA   C+    R++  S+ E   D  P  DFD + E +V EIRSRAMEKLR+K 
Sbjct: 8   VATGVRDAITYCYRCKGRKVTLSDHEADDDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKR 67

Query: 93  NLSDSFSWIFSPATKELYITSME--IEKMGKSRNEDNTGDEFYSVQS-FLTCCSSAATKE 152
                              T ME    K  K  + +N   EF SV+S F  CC S  + E
Sbjct: 68  R------------------TGMEGLTYKFVKEYDIEN---EFCSVRSSFSECCMSDISIE 127

Query: 153 AFFSVEANFSRGSSLNGLDFVDE-------DLKRHTALQELCHCEGWPFGLCRKALFLPP 212
            + + +  FSR SSL GL+  ++       ++K+ + +QE CHC+GWPFGL RKA  LPP
Sbjct: 128 GYMTAKTEFSRSSSLKGLELENQWKMHYVNEIKKGSVIQEFCHCQGWPFGLGRKAALLPP 186

Query: 213 LPKSPSESWSWSKWNKGTKV 219
           LPKSP+ESWSW K  + T V
Sbjct: 188 LPKSPAESWSWRKPTRVTPV 186

[Close]
BLAST of Cp4.1LG07g04540 vs. NCBI nr
Match: gi|659087790|ref|XP_008444637.1| (PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 3.0e-95
Identity = 172/207 (83.09%), Postives = 185/207 (89.37%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA  LKDAFCNCHTF + LP  N ED+YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGVLKDAFCNCHTFRKPLPKFNDEDEYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RK NLSDSFSW+FSPATKELYITSMEIEKM +S NEDN GDEFYSVQSFL
Sbjct: 61  IRTRAMEKLKRKANLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFSR SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWSWS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWSWS---KGTKIVKTY 204

[Close]
BLAST of Cp4.1LG07g04540 vs. NCBI nr
Match: gi|449470182|ref|XP_004152797.1| (PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 6.6e-95
Identity = 172/207 (83.09%), Postives = 185/207 (89.37%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA ALKDAFCNCHTF + LP  N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RKTNLSDSFSW+FSPATKELYITSMEIEKM +S NEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFSR SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESW WS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWLWS---KGTKIVKTY 204

[Close]
BLAST of Cp4.1LG07g04540 vs. NCBI nr
Match: gi|1009136424|ref|XP_015885517.1| (PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba])

HSP 1 Score: 243.4 bits (620), Expect = 3.7e-61
Identity = 123/209 (58.85%), Postives = 158/209 (75.60%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVS 75
           M +FY E+ P PSK+  FLAA LKD F NCHTF  ++  S  ++  P SDFDDE+E +VS
Sbjct: 1   MSIFYHEESPIPSKRCKFLAACLKDVFSNCHTFGDRVSTSIPDEDLPPSDFDDEQEVVVS 60

Query: 76  EIRSRAMEKLRRK-TNLSDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQS 135
            IRSRAMEKLR+K  NL+DSFSW++SP T+ELYIT   +E     + E++ G+EF SV+S
Sbjct: 61  AIRSRAMEKLRKKPNNLTDSFSWVYSPITRELYITPKGVE-----QKEEDGGEEFVSVKS 120

Query: 136 FL--TCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCR 195
               +CCSSAA+++AF SV+ +FSR  SLNGL+F+  D +R + +QELCHCEGWPFGLCR
Sbjct: 121 CFSCSCCSSAASRDAFLSVKTSFSRTPSLNGLEFI--DFQRRSIIQELCHCEGWPFGLCR 180

Query: 196 KALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           KA+ LPPLPKSPSESWSWS   KGTK+++
Sbjct: 181 KAVLLPPLPKSPSESWSWS---KGTKIIR 199

[Close]
BLAST of Cp4.1LG07g04540 vs. NCBI nr
Match: gi|703082889|ref|XP_010092069.1| (hypothetical protein L484_003373 [Morus notabilis])

HSP 1 Score: 240.7 bits (613), Expect = 2.4e-60
Identity = 123/209 (58.85%), Postives = 154/209 (73.68%), Query Frame = 1 

Query: 16  MGVFY-QEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIV 75
           M +FY +E+P NPSK+  FLAA LKDAF NCH F   L  SN +++YPTSDFD+E+E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 76  SEIRSRAMEKLRRKTNL--SDSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSV 135
           S IRS A+EKLRRK  L  SDSFSW++S  T+ELYIT   IE+       D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 136 QSFLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCR 195
           +S  +CCSSAA+++ F SV+++FSR SSLNG+D   ++ +R + +QE CHCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 196 KALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           KA+ LPPLPKSPSESWS   W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWS---WRKGTKTAK 204

[Close]
BLAST of Cp4.1LG07g04540 vs. NCBI nr
Match: gi|590592490|ref|XP_007017295.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-58
Identity = 121/214 (56.54%), Postives = 155/214 (72.43%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCNCHTFSRQLPNSNAEDKYPTSDFDDEEEEIVS 75
           M VFYQE+ P  SK+  FLA+ LK+AF NCH F     +S  E++YPTSD DDE E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 76  EIRSRAMEKLRRKTNLS-DSFSWIFSPATKELYITSMEIEKMGKSRNEDNTGDEFYSVQS 135
           EIRSRAMEK++R+ +L+ ++ SW+FSP+T EL+ITS   ++  K  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 136 FLTCCSSAATKEAFFSVEANFSRGSSLNGLDFVD------EDLKRHTALQELCHCEGWPF 195
             + CSSA ++EAF S +ANFSR SSLN +DF D      +D +R + +QE CHCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 196 GLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKT 222
           GLCRKA+ LPPLPKSPSESWS   W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWS---WRKGTRLAKT 207

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g04540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g04540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRD5_CUCSA4.6e-9583.09Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1[more]
W9QPV8_9ROSA1.7e-6058.85Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1[more]
A0A061FAY9_THECC1.5e-5856.54Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1[more]
B9GNX6_POPTR1.1e-5656.40Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1[more]
B9R7F5_RICCO2.5e-5657.75Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1[more]
BLAST of Cp4.1LG07g04540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47410.12.0e-2840.50 unknown protein[more]
BLAST of Cp4.1LG07g04540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087790|ref|XP_008444637.1|3.0e-9583.09PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo][more]
gi|449470182|ref|XP_004152797.1|6.6e-9583.09PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus][more]
gi|1009136424|ref|XP_015885517.1|3.7e-6158.85PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba][more]
gi|703082889|ref|XP_010092069.1|2.4e-6058.85hypothetical protein L484_003373 [Morus notabilis][more]
gi|590592490|ref|XP_007017295.1|2.2e-5856.54Uncharacterized protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0045491 xylan metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g04540.1Cp4.1LG07g04540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36324FAMILY NOT NAMEDcoord: 14..212
score: 7.8
NoneNo IPR availablePANTHERPTHR36324:SF1SUBFAMILY NOT NAMEDcoord: 14..212
score: 7.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g04540Cucsa.232710Cucumber (Gy14) v1cgycpeB0614
Cp4.1LG07g04540CmaCh12G005230Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g04540CmaCh05G001980Cucurbita maxima (Rimu)cmacpeB797
Cp4.1LG07g04540CmoCh05G001970Cucurbita moschata (Rifu)cmocpeB750
Cp4.1LG07g04540CmoCh12G004640Cucurbita moschata (Rifu)cmocpeB174
Cp4.1LG07g04540Cla022552Watermelon (97103) v1cpewmB782
Cp4.1LG07g04540Csa2G360040Cucumber (Chinese Long) v2cpecuB819
Cp4.1LG07g04540MELO3C010885Melon (DHL92) v3.5.1cpemeB754
Cp4.1LG07g04540ClCG08G015710Watermelon (Charleston Gray)cpewcgB748
Cp4.1LG07g04540CSPI02G19380Wild cucumber (PI 183967)cpecpiB820
Cp4.1LG07g04540Lsi08G014530Bottle gourd (USVL1VR-Ls)cpelsiB685
Cp4.1LG07g04540MELO3C010885.2Melon (DHL92) v3.6.1cpemedB890
Cp4.1LG07g04540CsaV3_2G028070Cucumber (Chinese Long) v3cpecucB1013
Cp4.1LG07g04540Bhi04G000295Wax gourdcpewgoB1028
Cp4.1LG07g04540CsGy2G019250Cucumber (Gy14) v2cgybcpeB270
Cp4.1LG07g04540Carg25833Silver-seed gourdcarcpeB0383
Cp4.1LG07g04540Carg11839Silver-seed gourdcarcpeB0268
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g04540Cp4.1LG11g01650Cucurbita pepo (Zucchini)cpecpeB146
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g04540Cucurbita pepo (Zucchini)cpecpeB471
Cp4.1LG07g04540Cucurbita pepo (Zucchini)cpecpeB500
Cp4.1LG07g04540Cucurbita pepo (Zucchini)cpecpeB510
Cp4.1LG07g04540Cucurbita maxima (Rimu)cmacpeB065
Cp4.1LG07g04540Cucurbita maxima (Rimu)cmacpeB516
Cp4.1LG07g04540Cucurbita moschata (Rifu)cmocpeB037
Cp4.1LG07g04540Cucurbita moschata (Rifu)cmocpeB474
Cp4.1LG07g04540Wild cucumber (PI 183967)cpecpiB833
Cp4.1LG07g04540Cucumber (Chinese Long) v2cpecuB832
Cp4.1LG07g04540Bottle gourd (USVL1VR-Ls)cpelsiB676
Cp4.1LG07g04540Watermelon (Charleston Gray)cpewcgB738
Cp4.1LG07g04540Watermelon (97103) v1cpewmB795
Cp4.1LG07g04540Melon (DHL92) v3.5.1cpemeB784
Cp4.1LG07g04540Cucumber (Gy14) v2cgybcpeB572
Cp4.1LG07g04540Melon (DHL92) v3.6.1cpemedB921
Cp4.1LG07g04540Silver-seed gourdcarcpeB0155
Cp4.1LG07g04540Silver-seed gourdcarcpeB1084
Cp4.1LG07g04540Cucumber (Chinese Long) v3cpecucB1025
Cp4.1LG07g04540Wax gourdcpewgoB1067