CmaCh12G005230 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G005230
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_6
LocationCma_Chr12 : 2719770 .. 2720659 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCTTTCTAACTTTATCTTTACACCTACGGATTAGAAAGCGTTGTTTACAATAAGCTGAGAAGGCACTGTAAGAAATGGAGCCAATTTTGATCCCTAAAGTCGAGCGGCAGTGAGGTGCAATTACTTCTCTATATATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCTACTGCCATACTTTTAGCAGACAGCTAACAAATTCAAACGCAGAGGACATATATCCTACGAGTGACTTCGACGATGAAGAGGAAGTACTCATCAGCTAATTCTTTTGTATTCTCTTTCATCTTATATGTAATATGTTTCTCTTAAGTTTTTTATCTTCTTCTCAGGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTGAGTCTAGAAATGAAGATAACACAGGAGATGAATTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCGAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCAAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCATACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAATCGCCGTCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

mRNA sequence

ATGTGTTCTTTCTAACTTTATCTTTACACCTACGGATTAGAAAGCGTTGTTTACAATAAGCTGAGAAGGCACTGTAAGAAATGGAGCCAATTTTGATCCCTAAAGTCGAGCGGCAGTGAGGTGCAATTACTTCTCTATATATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCTACTGCCATACTTTTAGCAGACAGCTAACAAATTCAAACGCAGAGGACATATATCCTACGAGTGACTTCGACGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTGAGTCTAGAAATGAAGATAACACAGGAGATGAATTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCGAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCAAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCATACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAATCGCCGTCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

Coding sequence (CDS)

ATGTCACTGGCTCGTAAAGGAACTAACAAATCCAGCCTCTCAAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCTAAGAAATCCTTTCTAGCAGCTGCTTTGAAGGATGCATTTTGCTACTGCCATACTTTTAGCAGACAGCTAACAAATTCAAACGCAGAGGACATATATCCTACGAGTGACTTCGACGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCGGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATAACATCAATGGAGATTGAGAAAATGGGTGAGTCTAGAAATGAAGATAACACAGGAGATGAATTCTACTCAGTTCAGAGTTTTCTCACATGTTGTTCGAGTGCTGCAACCAAGGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCAAGGTTCGAGCTTAAATGGTCTTGATTTTGTAGACGAAGATCTCAAGAGGCATACTGCCTTGCAGGAACTTTGTCATTGTGAAGGATGGCCGTTCGGTCTTTGCAGGAAGGCACTGTTCCTTCCTCCTCTGCCCAAATCGCCGTCTGAATCTTGGTCATGGAGTAAATGGAATAAAGGCACCAAAGTTGTAAAGACATATTGA

Protein sequence

MSLARKGTNKSSLSNMGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKTY
Homology
[Close]
BLAST of CmaCh12G005230 vs. TrEMBL
Match: A0A0A0LRD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.3e-93
Identity = 171/207 (82.61%), Postives = 183/207 (88.41%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA ALKDAFC CHTF + L   N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RKTNLSDSFSWVFSPATKELYITSMEIEKM ES NEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFS+ SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESW WS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWLWS---KGTKIVKTY 204

[Close]
BLAST of CmaCh12G005230 vs. TrEMBL
Match: W9QPV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.4e-59
Identity = 122/209 (58.37%), Postives = 154/209 (73.68%), Query Frame = 1 

Query: 16  MGVFY-QEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIV 75
           M +FY +E+P NPSK+  FLAA LKDAF  CH F   L+ SN ++ YPTSDFD+E+E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 76  SEIRSRAMEKLRRKTNL--SDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSV 135
           S IRS A+EKLRRK  L  SDSFSWV+S  T+ELYIT   IE+  +    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 136 QSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCR 195
           +S  +CCSSAA+++ F SV+++FS+ SSLNG+D   ++ +R + +QE CHCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 196 KALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           KA+ LPPLPKSPSESWS   W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWS---WRKGTKTAK 204

[Close]
BLAST of CmaCh12G005230 vs. TrEMBL
Match: A0A061FAY9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.9e-56
Identity = 119/214 (55.61%), Postives = 153/214 (71.50%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVS 75
           M VFYQE+ P  SK+  FLA+ LK+AF  CH F     +S  E+ YPTSD DDE E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 76  EIRSRAMEKLRRKTNLS-DSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQS 135
           EIRSRAMEK++R+ +L+ ++ SWVFSP+T EL+ITS   ++  +  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 136 FLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVD------EDLKRHTALQELCHCEGWPF 195
             + CSSA ++EAF S +ANFS+ SSLN +DF D      +D +R + +QE CHCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 196 GLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKT 222
           GLCRKA+ LPPLPKSPSESWS   W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWS---WRKGTRLAKT 207

[Close]
BLAST of CmaCh12G005230 vs. TrEMBL
Match: B9GNX6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55
Identity = 116/211 (54.98%), Postives = 151/211 (71.56%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVS 75
           MGVF+ E+ PNPSKK  FLAA LKD F  C T   +++ S+ E+ YPT+D DDE+E IVS
Sbjct: 1   MGVFHHEEAPNPSKKCKFLAATLKDVFSNCSTCGGRISTSSPEEEYPTADVDDEQEVIVS 60

Query: 76  EIRSRAMEKLRRKTNL-SDSFSWVFSPATKELYITSMEIEKMGESRNE----DNTGDEFY 135
           EIRSRAMEKLR K  + +DSFSWV+SP T EL++T   +++  +  ++    D+T +EF+
Sbjct: 61  EIRSRAMEKLRHKPFIFTDSFSWVYSPKTGELFVTPKAVQQKDDGNDDNDEYDDTREEFF 120

Query: 136 SVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGL 195
           SV S L+CCSSA ++EAF S + NFS+ SS N  +F   D  + + LQE CHC+GWPFGL
Sbjct: 121 SVGSCLSCCSSALSREAFVSAKPNFSRCSSFN--EFCFPDFPKRSILQEFCHCQGWPFGL 180

Query: 196 CRKALFLPPLPKSPSESWSWSKWNKGTKVVK 221
            RKA+ LPPLPKSPSESWS   W KG ++VK
Sbjct: 181 WRKAVLLPPLPKSPSESWS---WRKGARIVK 206

[Close]
BLAST of CmaCh12G005230 vs. TrEMBL
Match: B9R7F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.6e-55
Identity = 122/213 (57.28%), Postives = 153/213 (71.83%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVS 75
           MGVF+ EDPP P KK  FLAAALKDAF  C T  R+L+ S+ E+ +PTSD DDE+E IVS
Sbjct: 1   MGVFHHEDPPTPPKKCKFLAAALKDAFSNCST-CRRLSISSPEEEHPTSDIDDEQELIVS 60

Query: 76  EIRSRAMEKLRRKTN-LSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDE------ 135
            IRSRAMEK R ++  L+DSFSWVFSP T ELY+     ++  +  +++N  DE      
Sbjct: 61  AIRSRAMEKSRNRSFVLTDSFSWVFSPRTGELYLAPKIFQQKDDDGDDENNDDEDDEREE 120

Query: 136 FYSVQSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPF 195
           F SV S  +CCSSA +KEAF S++ NFS+ SSL+ +  + +D  R + L+E CHCEGWPF
Sbjct: 121 FLSVGSCFSCCSSALSKEAFVSMKTNFSRCSSLSDVLEI-KDFPRRSILEEFCHCEGWPF 180

Query: 196 GLCRKALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           GLCRKA+ LPPLPKSPSESWSWS   KG+K+VK
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWS---KGSKIVK 208

[Close]
BLAST of CmaCh12G005230 vs. TAIR10
Match: AT1G47410.1 (AT1G47410.1 unknown protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 1 

Query: 33  LAAALKDAFCYCHTFS-RQLTNSNAE---DIYPTSDFDDEEEEIVSEIRSRAMEKLRRKT 92
           +A  ++DA  YC+    R++T S+ E   D  P  DFD + E +V EIRSRAMEKLR+K 
Sbjct: 8   VATGVRDAITYCYRCKGRKVTLSDHEADDDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKR 67

Query: 93  NLS-DSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQS-FLTCCSSAATKEA 152
               +  ++ F        +   +IE            +EF SV+S F  CC S  + E 
Sbjct: 68  RTGMEGLTYKF--------VKEYDIE------------NEFCSVRSSFSECCMSDISIEG 127

Query: 153 FFSVEANFSQGSSLNGLDFVDE-------DLKRHTALQELCHCEGWPFGLCRKALFLPPL 212
           + + +  FS+ SSL GL+  ++       ++K+ + +QE CHC+GWPFGL RKA  LPPL
Sbjct: 128 YMTAKTEFSRSSSLKGLELENQWKMHYVNEIKKGSVIQEFCHCQGWPFGLGRKAALLPPL 186

Query: 213 PKSPSESWSWSKWNKGTKV 219
           PKSP+ESWSW K  + T V
Sbjct: 188 PKSPAESWSWRKPTRVTPV 186

[Close]
BLAST of CmaCh12G005230 vs. NCBI nr
Match: gi|659087790|ref|XP_008444637.1| (PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 4.7e-93
Identity = 171/207 (82.61%), Postives = 182/207 (87.92%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA  LKDAFC CHTF + L   N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGVLKDAFCNCHTFRKPLPKFNDEDEYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RK NLSDSFSWVFSPATKELYITSMEIEKM ES NEDN GDEFYSVQSFL
Sbjct: 61  IRTRAMEKLKRKANLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVQSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFS+ SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESWSWS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWSWS---KGTKIVKTY 204

[Close]
BLAST of CmaCh12G005230 vs. NCBI nr
Match: gi|449470182|ref|XP_004152797.1| (PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 6.2e-93
Identity = 171/207 (82.61%), Postives = 183/207 (88.41%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKKSFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVSE 75
           MGVFYQEDPPNPS+K FLA ALKDAFC CHTF + L   N ED YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 76  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQSFL 135
           IR+RAMEKL+RKTNLSDSFSWVFSPATKELYITSMEIEKM ES NEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 136 TCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCRKALF 195
           TCCS+AAT EAFFSVEANFS+ SSLNGL+F+DEDLKR T LQE+ HCEGWPFGLCRKA+ 
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 196 LPPLPKSPSESWSWSKWNKGTKVVKTY 223
           LPPLPKSPSESW WS   KGTK+VKTY
Sbjct: 181 LPPLPKSPSESWLWS---KGTKIVKTY 204

[Close]
BLAST of CmaCh12G005230 vs. NCBI nr
Match: gi|1009136424|ref|XP_015885517.1| (PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba])

HSP 1 Score: 239.2 bits (609), Expect = 6.9e-60
Identity = 122/209 (58.37%), Postives = 158/209 (75.60%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVS 75
           M +FY E+ P PSK+  FLAA LKD F  CHTF  +++ S  ++  P SDFDDE+E +VS
Sbjct: 1   MSIFYHEESPIPSKRCKFLAACLKDVFSNCHTFGDRVSTSIPDEDLPPSDFDDEQEVVVS 60

Query: 76  EIRSRAMEKLRRK-TNLSDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQS 135
            IRSRAMEKLR+K  NL+DSFSWV+SP T+ELYIT   +E+      E++ G+EF SV+S
Sbjct: 61  AIRSRAMEKLRKKPNNLTDSFSWVYSPITRELYITPKGVEQ-----KEEDGGEEFVSVKS 120

Query: 136 FLTC--CSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCR 195
             +C  CSSAA+++AF SV+ +FS+  SLNGL+F+D   +R + +QELCHCEGWPFGLCR
Sbjct: 121 CFSCSCCSSAASRDAFLSVKTSFSRTPSLNGLEFID--FQRRSIIQELCHCEGWPFGLCR 180

Query: 196 KALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           KA+ LPPLPKSPSESWSWS   KGTK+++
Sbjct: 181 KAVLLPPLPKSPSESWSWS---KGTKIIR 199

[Close]
BLAST of CmaCh12G005230 vs. NCBI nr
Match: gi|703082889|ref|XP_010092069.1| (hypothetical protein L484_003373 [Morus notabilis])

HSP 1 Score: 236.9 bits (603), Expect = 3.4e-59
Identity = 122/209 (58.37%), Postives = 154/209 (73.68%), Query Frame = 1 

Query: 16  MGVFY-QEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIV 75
           M +FY +E+P NPSK+  FLAA LKDAF  CH F   L+ SN ++ YPTSDFD+E+E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 76  SEIRSRAMEKLRRKTNL--SDSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSV 135
           S IRS A+EKLRRK  L  SDSFSWV+S  T+ELYIT   IE+  +    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 136 QSFLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVDEDLKRHTALQELCHCEGWPFGLCR 195
           +S  +CCSSAA+++ F SV+++FS+ SSLNG+D   ++ +R + +QE CHCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 196 KALFLPPLPKSPSESWSWSKWNKGTKVVK 221
           KA+ LPPLPKSPSESWS   W KGTK  K
Sbjct: 181 KAVLLPPLPKSPSESWS---WRKGTKTAK 204

[Close]
BLAST of CmaCh12G005230 vs. NCBI nr
Match: gi|590592490|ref|XP_007017295.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 227.3 bits (578), Expect = 2.7e-56
Identity = 119/214 (55.61%), Postives = 153/214 (71.50%), Query Frame = 1 

Query: 16  MGVFYQEDPPNPSKK-SFLAAALKDAFCYCHTFSRQLTNSNAEDIYPTSDFDDEEEEIVS 75
           M VFYQE+ P  SK+  FLA+ LK+AF  CH F     +S  E+ YPTSD DDE E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 76  EIRSRAMEKLRRKTNLS-DSFSWVFSPATKELYITSMEIEKMGESRNEDNTGDEFYSVQS 135
           EIRSRAMEK++R+ +L+ ++ SWVFSP+T EL+ITS   ++  +  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 136 FLTCCSSAATKEAFFSVEANFSQGSSLNGLDFVD------EDLKRHTALQELCHCEGWPF 195
             + CSSA ++EAF S +ANFS+ SSLN +DF D      +D +R + +QE CHCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 196 GLCRKALFLPPLPKSPSESWSWSKWNKGTKVVKT 222
           GLCRKA+ LPPLPKSPSESWS   W KGT++ KT
Sbjct: 181 GLCRKAVLLPPLPKSPSESWS---WRKGTRLAKT 207

The following BLAST results are available for this feature:
BLAST of CmaCh12G005230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh12G005230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRD5_CUCSA4.3e-9382.61Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1[more]
W9QPV8_9ROSA2.4e-5958.37Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1[more]
A0A061FAY9_THECC1.9e-5655.61Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1[more]
B9GNX6_POPTR1.6e-5554.98Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1[more]
B9R7F5_RICCO3.6e-5557.28Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1[more]
BLAST of CmaCh12G005230 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47410.11.8e-2939.70 unknown protein[more]
BLAST of CmaCh12G005230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087790|ref|XP_008444637.1|4.7e-9382.61PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo][more]
gi|449470182|ref|XP_004152797.1|6.2e-9382.61PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus][more]
gi|1009136424|ref|XP_015885517.1|6.9e-6058.37PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba][more]
gi|703082889|ref|XP_010092069.1|3.4e-5958.37hypothetical protein L484_003373 [Morus notabilis][more]
gi|590592490|ref|XP_007017295.1|2.7e-5655.61Uncharacterized protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G005230.1CmaCh12G005230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36324FAMILY NOT NAMEDcoord: 14..212
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G005230Cucsa.232710Cucumber (Gy14) v1cgycmaB0638
CmaCh12G005230Cla022552Watermelon (97103) v1cmawmB148
CmaCh12G005230Csa2G360040Cucumber (Chinese Long) v2cmacuB174
CmaCh12G005230MELO3C010885Melon (DHL92) v3.5.1cmameB156
CmaCh12G005230ClCG08G015710Watermelon (Charleston Gray)cmawcgB169
CmaCh12G005230CSPI02G19380Wild cucumber (PI 183967)cmacpiB175
CmaCh12G005230CmoCh05G001970Cucurbita moschata (Rifu)cmacmoB199
CmaCh12G005230CmoCh12G004640Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G005230Lsi08G014530Bottle gourd (USVL1VR-Ls)cmalsiB184
CmaCh12G005230Cp4.1LG11g01650Cucurbita pepo (Zucchini)cmacpeB179
CmaCh12G005230Cp4.1LG07g04540Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G005230MELO3C010885.2Melon (DHL92) v3.6.1cmamedB170
CmaCh12G005230CsaV3_2G028070Cucumber (Chinese Long) v3cmacucB0203
CmaCh12G005230Cla97C08G159290Watermelon (97103) v2cmawmbB194
CmaCh12G005230Bhi04G000295Wax gourdcmawgoB0194
CmaCh12G005230CsGy2G019250Cucumber (Gy14) v2cgybcmaB179
CmaCh12G005230Carg25833Silver-seed gourdcarcmaB0377
CmaCh12G005230Carg11839Silver-seed gourdcarcmaB0249
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G005230CmaCh05G001980Cucurbita maxima (Rimu)cmacmaB199
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G005230Cucumber (Gy14) v2cgybcmaB479
CmaCh12G005230Melon (DHL92) v3.6.1cmamedB198
CmaCh12G005230Silver-seed gourdcarcmaB0135
CmaCh12G005230Silver-seed gourdcarcmaB1067
CmaCh12G005230Cucumber (Chinese Long) v3cmacucB0215
CmaCh12G005230Watermelon (97103) v2cmawmbB178
CmaCh12G005230Cucurbita maxima (Rimu)cmacmaB182
CmaCh12G005230Cucumber (Chinese Long) v2cmacuB186
CmaCh12G005230Melon (DHL92) v3.5.1cmameB182
CmaCh12G005230Watermelon (Charleston Gray)cmawcgB160
CmaCh12G005230Watermelon (97103) v1cmawmB159