Cucsa.232940 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.232940
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThioredoxin, putative
Locationscaffold01989 : 689844 .. 691682 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGATAATGATCGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGTTCTTCTTCCCGCTCGGAGGTAATCAACTGGTCCTTCATTTGTTGCTTTACCCCTTCAATTTTTCACCTTTCATTCTCTTAACAGTTACTTTTCATCCTCTTTCTGAATCGATAATCGAAATTTTCTCCTCCTTTAACATGATTAATGTTAAATAAGATTTATCATGAGTTTGAAACATTGTCTTGAATGCTACATCTGAATCTGATATATTGCTCAGTTTTATTAGAGCTTTCTGACTGAAGTTCATTCACTAAAGAACTCCCAAATCGGAGTTTtGGGTATATATATATATATATATATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTAATCAGTTTTGGATTAAACCCAAATGAGAAAATGGAGCCGAGAATCCCCATTTTGATTCCCCGCTGGCTTTCTTCGGAGAAAGAGCCCGTTCGATTGTCGATTACAAGACCCGAAGTTCCAAGAAACCAATTGTTATACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGTTGAGTGATGAGGATGATGATCTTTGCCCTGTAGACTGTGTGCGGGAATTCAAGACGGATGAAGAGTTCATTAAAATTCTAGACAAGGCGAAGGAAAACGGTGGTTTGGTAGTTGTGGACTTTTATCGAACATCTTGTGGAAGTTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTGAGTGTTTCATATTAGCCATGTTTTCTCGGGAAATTGACTTCCATTACAATCACTGACTGGTTATTATGCTTTGAATTTGATTGTGTGTTTTAGGTCATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGGCTAAGGATCAAGGTAAGCTTGTTTTCTCTTCTTGATTGCCAAGTTGGGTTTGTGTTGAATTAGACTGAAGTTTTGACAAACTGTTCTTGGTCTCTTCGGAAACTTTCTGTTTGCTTTGAGATATTAAAATCTTCTTATTCTAATTATTGTAAGGTCCGATTTTAATTTTAATTTTtAATTTTTAATGATTTCAGTAATTTTTATTATTATTAGATTTTTGCTGCATTAAAAAACATAACTAATATAATATTTATTGTTGTTTCAAACATCATCAAGAAAGTATTAAGAAATGGTTAAATTACAAATTTTGTCATTTGAAGAAAATTAGTATTTAGTTTGAAAAGTTATGTTTAGTCCTTAACAATACCTCATGAATATTCATTATAATTTGATTTAGAGGTAGAAAACCATTAAAATTAGTGTTTGTTTGTGATTGAGTTAATTAAGTTCCTAAAATGTTAATGTTTATGATAAACAAGTTTTGTTTTtGtATTTTAGTTCACTAATGTTGAAATTTGATGATGGCATTGCAGACTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTATTAGAAGCATTTCCTACAAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCATCTTCTCCACTTCAAATTTAATTTGATCATTATTCTTGTGGCCTTGCACCTTTTGTAAAATAATAATACCAAACAAAACCACGAATCTGATACAAACCCCATCCAGCCCTTTATGTGACAATGTAAGATCTTGGGAGGAATCATATGCTTGATTATCATATTTTGTGCTCTGTAAGATCATAAATTAGAAGATGAGCCTCTTGTAGTTTGTGCTTTTGTTTAATCTCTTGTTTGAAATAGGTAGCAGCAGAAAGGACAA

mRNA sequence

GAAGATAATGATCGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGTTCTTCTTCCCGCTCGGAGTTTTATTAGAGCTTTCTGACTGAAGTTCATTCACTAAAGAACTCCCAAATCGGAGTTTTGGGtatatatatatatatatatatatatatGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTAATCAGTTTTGGATTAAACCCAAATGAGAAAATGGAGCCGAGAATCCCCATTTTGATTCCCCGCTGGCTTTCTTCGGAGAAAGAGCCCGTTCGATTGTCGATTACAAGACCCGAAGTTCCAAGAAACCAATTGTTATACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGTTGAGTGATGAGGATGATGATCTTTGCCCTGTAGACTGTGTGCGGGAATTCAAGACGGATGAAGAGTTCATTAAAATTCTAGACAAGGCGAAGGAAAACGGTGGTTTGGTAGTTGTGGACTTTTATCGAACATCTTGTGGAAGTTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTCATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGGCTAAGGATCAAGACTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTATTAGAAGCATTTCCTACAAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCATCTTCTCCACTTCAAATTTAATTTGATCATTATTCTTGTGGCCTTGCACCTTTTGTAAAATAATAATACCAAACAAAACCACGAATCTGATACAAACCCCATCCAGCCCTTTATGTGACAATGTAAGATCTTGGGAGGAATCATATGCTTGATTATCATATTTTGTGCTCTGTAAGATCATAAATTAGAAGATGAGCCTCTTGTAGTTTGTGCTTTTGTTTAATCTCTTGTTTGAAATAGGTAGCAGCAGAAAGGACAA

Coding sequence (CDS)

ATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAACTTTAATCAGTTTTGGATTAAACCCAAATGAGAAAATGGAGCCGAGAATCCCCATTTTGATTCCCCGCTGGCTTTCTTCGGAGAAAGAGCCCGTTCGATTGTCGATTACAAGACCCGAAGTTCCAAGAAACCAATTGTTATACAAGAGTAAAATGAGAGTTAATGCTGGAAATCAGGGGGAGTTGAGTGATGAGGATGATGATCTTTGCCCTGTAGACTGTGTGCGGGAATTCAAGACGGATGAAGAGTTCATTAAAATTCTAGACAAGGCGAAGGAAAACGGTGGTTTGGTAGTTGTGGACTTTTATCGAACATCTTGTGGAAGTTGCAAATATATAGAACAAGGGTTTGCAAAATTGTGCAAGGGGTCTGGCGATCAACAGGCACCGGTTATCTTCTTGAAGCATAATGTCATGGATGAATATGATGAACAATCTGAGGTTGCTGAACGGCTAAGGATCAAGACTGTGCCACTGTTCCACTTCTACAAAGATGGGGTCTTATTAGAAGCATTTCCTACAAGAGATAAAGAGAGGATCCTCACAGCCATAACCAAATATTCATCTTCTCCACTTCAAATTTAA

Protein sequence

MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQI*
Homology
[Close]
BLAST of Cucsa.232940 vs. Swiss-Prot
Match: TRL4_ARATH (Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana GN=At1g07700 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.9e-57
Identity = 113/164 (68.90%), Postives = 131/164 (79.88%), Query Frame = 1 

Query: 44  VRLSITRPEVPRNQLLYKSKMR-----VNAGNQGELSDEDDDLCPVDCVREFKTDEEFIK 103
           VRLS  R E   N  +  +  R     ++  N  ELSDE+DDLCPV+CV EFKTD+E + 
Sbjct: 39  VRLSFPRAESSINITMGCTLQRGIAKSLSQENLVELSDENDDLCPVECVTEFKTDDELLS 98

Query: 104 ILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQS 163
           +L+K+KE   LVVVDFYRT+CGSCKYIEQGF+KLCK SGDQ+APVIFLKHNV+DEYDEQS
Sbjct: 99  VLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQS 158

Query: 164 EVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSS 203
           EVAERLRIK VPLFHFYK+GVLLE+F TRDKERI  AI KY+SS
Sbjct: 159 EVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKYTSS 202

[Close]
BLAST of Cucsa.232940 vs. Swiss-Prot
Match: TRL4_ORYSJ (Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0567100 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50
Identity = 94/132 (71.21%), Postives = 113/132 (85.61%), Query Frame = 1 

Query: 74  LSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLC 133
           + +E+++ CPV+CV EFKT+EE  ++L++AK  G LVVVDF+R SCGSCKYIEQGF KLC
Sbjct: 72  VEEEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLC 131

Query: 134 KGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERIL 193
           KGSGD  + V+FLKHNV+DEYDEQSEVA+RLRIK VPLFHFYK+GVLLEAF TRDKERI+
Sbjct: 132 KGSGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERII 191

Query: 194 TAITKYS--SSP 204
            AI KY+  SSP
Sbjct: 192 AAIQKYTAPSSP 203

[Close]
BLAST of Cucsa.232940 vs. Swiss-Prot
Match: THIO_MOUSE (Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3)

HSP 1 Score: 62.8 bits (151), Expect = 5.2e-09
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 1 

Query: 87  VREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFL 146
           V+  ++ E F + L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 147 KHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYS 201
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++  +IT+Y+
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEYA 105

[Close]
BLAST of Cucsa.232940 vs. Swiss-Prot
Match: THIO_RAT (Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 1 

Query: 87  VREFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFL 146
           V+  ++ E F + L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 147 KHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYS 201
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++   IT+++
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATITEFA 105

[Close]
BLAST of Cucsa.232940 vs. Swiss-Prot
Match: TRL2_ORYSJ (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0200100 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.4e-08
Identity = 47/153 (30.72%), Postives = 76/153 (49.67%), Query Frame = 1 

Query: 34  PRWLSSEKEPVRLSITRPEVPRNQLLYKSKMRVNAGNQGELSDEDDDLCPVDCVREFKTD 93
           P  L S   P    +  P  PR++ L       +   Q +  +++     +D      + 
Sbjct: 32  PHCLLSRANPRPPRLAAPSPPRHRRLKAHAAVSDKSEQPKWWEKNAGPNMID----IHST 91

Query: 94  EEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDE 153
           +EF+  L  A +   LV+V+FY T CGSC+ +   F +LC+ +  +   ++FLK N    
Sbjct: 92  QEFLDALRDAGDR--LVIVEFYGTWCGSCRAL---FPRLCR-TAVENPDILFLKVN---- 151

Query: 154 YDEQSEVAERLRIKTVPLFHFYK--DGVLLEAF 185
           +DE   + +RL +K +P FHFY+  DG  LEAF
Sbjct: 152 FDENKPMCKRLNVKVLPYFHFYRGADG-QLEAF 169

[Close]
BLAST of Cucsa.232940 vs. TrEMBL
Match: A0A0A0LP39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G357300 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.2e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

Query: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60
           MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60

Query: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120
           KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

Query: 181 LEAFPTRDKERILTAITKYSSSPLQI 207
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]
BLAST of Cucsa.232940 vs. TrEMBL
Match: A0A067KQ52_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04261 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-66
Identity = 130/208 (62.50%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKE--------PVRLSITRPEVPR 63
           Q QN+L        G NP+ K   RIP ++PR   + K         P+  ++    + +
Sbjct: 2   QKQNILYSNASFGLGSNPDRKCGSRIPHVVPRMRCNTKSCLVWTKIIPISKTVGLDFLKK 61

Query: 64  NQLLYKSKMR-VNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDF 123
           +      +++ V  GN GELSDED+DLCP DCVREFKTDEEF+KI++KAKE G LVVVDF
Sbjct: 62  SDTFQPGRIKGVADGNPGELSDEDEDLCPADCVREFKTDEEFLKIIEKAKETGSLVVVDF 121

Query: 124 YRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHF 183
           YRTSCGSCKYIEQGFAKLC+G+GD++A VIFLKHNV+DEYDEQSEVAERLRIKTVPLFHF
Sbjct: 122 YRTSCGSCKYIEQGFAKLCRGAGDEEAAVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHF 181

Query: 184 YKDGVLLEAFPTRDKERILTAITKYSSS 203
           YK+GVLLEAFPTRDKERI  AI KY+S+
Sbjct: 182 YKNGVLLEAFPTRDKERITAAILKYTST 209

[Close]
BLAST of Cucsa.232940 vs. TrEMBL
Match: U5FTV4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s02920g PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.3e-66
Identity = 139/215 (64.65%), Postives = 160/215 (74.42%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWL---SSEKEPVRL----SITRP---EV 63
           Q QN+L  K    FG NP+ +++ RIP + P  L    +EK  +      SIT+      
Sbjct: 26  QKQNILYSKASFGFGRNPDRQLDCRIPCVAPSMLPCRGNEKSCLMKAKFPSITKYAGLNF 85

Query: 64  PRNQLLYKSKMRVNA---GNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLV 123
           P+N +  +   R+ A    N GELSDEDDDLCPVDCVREFKTDEEF++IL+KAKE   LV
Sbjct: 86  PKNNVASRPG-RIKAVVDENPGELSDEDDDLCPVDCVREFKTDEEFLRILEKAKETDSLV 145

Query: 124 VVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVP 183
           VVDFYRTSCGSCKYIEQGFAKLCKGSGDQ+A V FLKHNV+DEYDEQSEVAERLRIKTVP
Sbjct: 146 VVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAAVTFLKHNVIDEYDEQSEVAERLRIKTVP 205

Query: 184 LFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQ 206
           LFHFYK GVL+E+FPTRDKERIL AI KY+S   Q
Sbjct: 206 LFHFYKKGVLVESFPTRDKERILGAILKYTSPAAQ 239

[Close]
BLAST of Cucsa.232940 vs. TrEMBL
Match: U5FNX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s02920g PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.3e-66
Identity = 139/215 (64.65%), Postives = 160/215 (74.42%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWL---SSEKEPVRL----SITRP---EV 63
           Q QN+L  K    FG NP+ +++ RIP + P  L    +EK  +      SIT+      
Sbjct: 2   QKQNILYSKASFGFGRNPDRQLDCRIPCVAPSMLPCRGNEKSCLMKAKFPSITKYAGLNF 61

Query: 64  PRNQLLYKSKMRVNA---GNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLV 123
           P+N +  +   R+ A    N GELSDEDDDLCPVDCVREFKTDEEF++IL+KAKE   LV
Sbjct: 62  PKNNVASRPG-RIKAVVDENPGELSDEDDDLCPVDCVREFKTDEEFLRILEKAKETDSLV 121

Query: 124 VVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVP 183
           VVDFYRTSCGSCKYIEQGFAKLCKGSGDQ+A V FLKHNV+DEYDEQSEVAERLRIKTVP
Sbjct: 122 VVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAAVTFLKHNVIDEYDEQSEVAERLRIKTVP 181

Query: 184 LFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQ 206
           LFHFYK GVL+E+FPTRDKERIL AI KY+S   Q
Sbjct: 182 LFHFYKKGVLVESFPTRDKERILGAILKYTSPAAQ 215

[Close]
BLAST of Cucsa.232940 vs. TrEMBL
Match: B9R7C2_RICCO (Thioredoxin, putative OS=Ricinus communis GN=RCOM_1590520 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 133/217 (61.29%), Postives = 155/217 (71.43%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRW----------LSSEKEPVRLSITRPEV 63
           Q QN+L       FG +P E++  RIP +IPR           + ++  P+  +I+   +
Sbjct: 2   QKQNILHSNASFGFGKSPEEQLGSRIPHVIPRMCLYRYAKSCLIRAKAVPITKTISLDFL 61

Query: 64  PRNQLLY----KSKMRVNAGNQGELSDEDD-DLCPVDCVREFKTDEEFIKILDKAKENGG 123
             +        + K+ V  GN GELSDEDD DLCPVDCV+EFKTDEEF KIL+KAKE   
Sbjct: 62  KNSDAFLLQPARIKLGVTDGNLGELSDEDDEDLCPVDCVKEFKTDEEFFKILEKAKETDS 121

Query: 124 LVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKT 183
           LVVVDFYR SCGSCKYIEQGFAKLC+G+GD +A VIFLKHNV+DEYDEQSEVAERLRIKT
Sbjct: 122 LVVVDFYRPSCGSCKYIEQGFAKLCRGAGDNEASVIFLKHNVIDEYDEQSEVAERLRIKT 181

Query: 184 VPLFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQ 206
           VPLFHFYK GVLLEAFPTRDKERI  +I KYSS   Q
Sbjct: 182 VPLFHFYKGGVLLEAFPTRDKERITASILKYSSPASQ 218

[Close]
BLAST of Cucsa.232940 vs. TAIR10
Match: AT1G07700.3 (AT1G07700.3 Thioredoxin superfamily protein)

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-58
Identity = 113/164 (68.90%), Postives = 131/164 (79.88%), Query Frame = 1 

Query: 44  VRLSITRPEVPRNQLLYKSKMR-----VNAGNQGELSDEDDDLCPVDCVREFKTDEEFIK 103
           VRLS  R E   N  +  +  R     ++  N  ELSDE+DDLCPV+CV EFKTD+E + 
Sbjct: 52  VRLSFPRAESSINITMGCTLQRGIAKSLSQENLVELSDENDDLCPVECVTEFKTDDELLS 111

Query: 104 ILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQS 163
           +L+K+KE   LVVVDFYRT+CGSCKYIEQGF+KLCK SGDQ+APVIFLKHNV+DEYDEQS
Sbjct: 112 VLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQS 171

Query: 164 EVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSSS 203
           EVAERLRIK VPLFHFYK+GVLLE+F TRDKERI  AI KY+SS
Sbjct: 172 EVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKYTSS 215

[Close]
BLAST of Cucsa.232940 vs. TAIR10
Match: AT4G26160.1 (AT4G26160.1 atypical CYS HIS rich thioredoxin 1)

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1 

Query: 94  EEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDE 153
           E+F+  L  A +   LV+VDFY T CGSC+ +   F KLCK +  +   ++FLK N    
Sbjct: 102 EQFLNALKDAGDR--LVIVDFYGTWCGSCRAM---FPKLCK-TAKEHPNILFLKVN---- 161

Query: 154 YDEQSEVAERLRIKTVPLFHFYK 177
           +DE   + + L +K +P FHFY+
Sbjct: 162 FDENKSLCKSLNVKVLPYFHFYR 174

[Close]
BLAST of Cucsa.232940 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 1 

Query: 92  TDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVM 151
           T E++ + L  A E+  L+V+DF  T C  C++I   FA L K   D    V+F K +V 
Sbjct: 12  TVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLD----VVFFKVDV- 71

Query: 152 DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKYSS 202
              DE + VAE  +++ +P F F K+G + E      KE I+  + K+ +
Sbjct: 72  ---DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

[Close]
BLAST of Cucsa.232940 vs. TAIR10
Match: AT4G29670.2 (AT4G29670.2 atypical CYS HIS rich thioredoxin 2)

HSP 1 Score: 57.8 bits (138), Expect = 9.4e-09
Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 1 

Query: 89  EFKTDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKH 148
           +  + EEF+  L  A E   LV+V+FY T C SC+ +   F KLCK +  +   ++FLK 
Sbjct: 107 DIHSTEEFLSALSGAGER--LVIVEFYGTWCASCRAL---FPKLCK-TAVEHPDIVFLKV 166

Query: 149 NVMDEYDEQSEVAERLRIKTVPLFHFYK--DGVL 181
           N    +DE   + + L ++ +P FHFY+  DG L
Sbjct: 167 N----FDENKPMCKSLNVRVLPFFHFYRGADGQL 190

[Close]
BLAST of Cucsa.232940 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 55.8 bits (133), Expect = 3.6e-08
Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 1 

Query: 92  TDEEFIKILDKAKENGGLVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVM 151
           T E + + L KA E+  LVVVDF  + CG C++I   FA L K    +   V+FLK +  
Sbjct: 13  TVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAK----KLPNVLFLKVDT- 72

Query: 152 DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILTAITKY 200
              DE   VA    I+ +P F F K+G +L+      K+ + + I K+
Sbjct: 73  ---DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]
BLAST of Cucsa.232940 vs. NCBI nr
Match: gi|449466338|ref|XP_004150883.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 4.5e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

Query: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60
           MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60

Query: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120
           KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

Query: 181 LEAFPTRDKERILTAITKYSSSPLQI 207
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]
BLAST of Cucsa.232940 vs. NCBI nr
Match: gi|659087759|ref|XP_008444622.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 1.8e-110
Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 1 

Query: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60
           MQRQNQNVLQCKTLISFGL+PNEK+E RIPILIPRWLSSEKEPVRLSITRPEVPR+QLLY
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLY 60

Query: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120
           KSKMRVNAGNQGE+ DEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180
           SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIK+VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

Query: 181 LEAFPTRDKERILTAITKYSSSPLQI 207
           LEAFPTRDKERILTAITKYSSSPLQI
Sbjct: 181 LEAFPTRDKERILTAITKYSSSPLQI 206

[Close]
BLAST of Cucsa.232940 vs. NCBI nr
Match: gi|802592579|ref|XP_012071661.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Jatropha curcas])

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-66
Identity = 130/208 (62.50%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKE--------PVRLSITRPEVPR 63
           Q QN+L        G NP+ K   RIP ++PR   + K         P+  ++    + +
Sbjct: 2   QKQNILYSNASFGLGSNPDRKCGSRIPHVVPRMRCNTKSCLVWTKIIPISKTVGLDFLKK 61

Query: 64  NQLLYKSKMR-VNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDF 123
           +      +++ V  GN GELSDED+DLCP DCVREFKTDEEF+KI++KAKE G LVVVDF
Sbjct: 62  SDTFQPGRIKGVADGNPGELSDEDEDLCPADCVREFKTDEEFLKIIEKAKETGSLVVVDF 121

Query: 124 YRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHF 183
           YRTSCGSCKYIEQGFAKLC+G+GD++A VIFLKHNV+DEYDEQSEVAERLRIKTVPLFHF
Sbjct: 122 YRTSCGSCKYIEQGFAKLCRGAGDEEAAVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHF 181

Query: 184 YKDGVLLEAFPTRDKERILTAITKYSSS 203
           YK+GVLLEAFPTRDKERI  AI KY+S+
Sbjct: 182 YKNGVLLEAFPTRDKERITAAILKYTST 209

[Close]
BLAST of Cucsa.232940 vs. NCBI nr
Match: gi|743787093|ref|XP_011029989.1| (PREDICTED: thioredoxin-like 4, chloroplastic isoform X2 [Populus euphratica])

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 136/214 (63.55%), Postives = 156/214 (72.90%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLS--SEKEPVRLSITRPEVPRNQLLYK 63
           Q QN+L  K    FG NP+ +++ RIP + P  L     K+   +    P + + + L  
Sbjct: 2   QKQNILYSKASFGFGRNPDRQLDCRIPCVAPSMLPRRGNKKSCLMKAKFPSITKYEGLNF 61

Query: 64  SKM-------RVNA---GNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVV 123
            K        R+ A    N GELSDEDDDLCPVDCVREFKTDEEF++IL+KAKE   LVV
Sbjct: 62  PKNNDAWRPGRIKAVVDENPGELSDEDDDLCPVDCVREFKTDEEFLRILEKAKETDSLVV 121

Query: 124 VDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPL 183
           VDFYRTSCGSCKYIEQGFAKLCKGSGDQ+A V FLKHNV+DEYDEQSEVAERLRIKTVPL
Sbjct: 122 VDFYRTSCGSCKYIEQGFAKLCKGSGDQEAAVTFLKHNVIDEYDEQSEVAERLRIKTVPL 181

Query: 184 FHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQ 206
           FHFYK GVL+E+FPTRDKERIL AI KY+S   Q
Sbjct: 182 FHFYKRGVLVESFPTRDKERILGAILKYTSPAAQ 215

[Close]
BLAST of Cucsa.232940 vs. NCBI nr
Match: gi|566202129|ref|XP_006374940.1| (hypothetical protein POPTR_0014s02920g [Populus trichocarpa])

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 139/215 (64.65%), Postives = 160/215 (74.42%), Query Frame = 1 

Query: 4   QNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWL---SSEKEPVRL----SITRP---EV 63
           Q QN+L  K    FG NP+ +++ RIP + P  L    +EK  +      SIT+      
Sbjct: 26  QKQNILYSKASFGFGRNPDRQLDCRIPCVAPSMLPCRGNEKSCLMKAKFPSITKYAGLNF 85

Query: 64  PRNQLLYKSKMRVNA---GNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLV 123
           P+N +  +   R+ A    N GELSDEDDDLCPVDCVREFKTDEEF++IL+KAKE   LV
Sbjct: 86  PKNNVASRPG-RIKAVVDENPGELSDEDDDLCPVDCVREFKTDEEFLRILEKAKETDSLV 145

Query: 124 VVDFYRTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVP 183
           VVDFYRTSCGSCKYIEQGFAKLCKGSGDQ+A V FLKHNV+DEYDEQSEVAERLRIKTVP
Sbjct: 146 VVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAAVTFLKHNVIDEYDEQSEVAERLRIKTVP 205

Query: 184 LFHFYKDGVLLEAFPTRDKERILTAITKYSSSPLQ 206
           LFHFYK GVL+E+FPTRDKERIL AI KY+S   Q
Sbjct: 206 LFHFYKKGVLVESFPTRDKERILGAILKYTSPAAQ 239

The following BLAST results are available for this feature:
BLAST of Cucsa.232940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRL4_ARATH3.9e-5768.90Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana GN=At1g07700 PE=2 SV=1[more]
TRL4_ORYSJ1.2e-5071.21Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g056710... [more]
THIO_MOUSE5.2e-0935.96Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3[more]
THIO_RAT2.0e-0835.09Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2[more]
TRL2_ORYSJ4.4e-0830.72Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g020010... [more]
BLAST of Cucsa.232940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP39_CUCSA3.2e-114100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G357300 PE=4 SV=1[more]
A0A067KQ52_JATCU1.4e-6662.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04261 PE=4 SV=1[more]
U5FTV4_POPTR9.3e-6664.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s02920g PE=4 SV=1[more]
U5FNX3_POPTR9.3e-6664.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s02920g PE=4 SV=1[more]
B9R7C2_RICCO3.9e-6461.29Thioredoxin, putative OS=Ricinus communis GN=RCOM_1590520 PE=4 SV=1[more]
BLAST of Cucsa.232940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07700.32.2e-5868.90 Thioredoxin superfamily protein[more]
AT4G26160.13.2e-0939.76 atypical CYS HIS rich thioredoxin 1[more]
AT5G42980.15.5e-0933.64 thioredoxin 3[more]
AT4G29670.29.4e-0937.23 atypical CYS HIS rich thioredoxin 2[more]
AT3G51030.13.6e-0835.19 thioredoxin H-type 1[more]
BLAST of Cucsa.232940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449466338|ref|XP_004150883.1|4.5e-114100.00PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis sativus][more]
gi|659087759|ref|XP_008444622.1|1.8e-11096.60PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo][more]
gi|802592579|ref|XP_012071661.1|2.1e-6662.50PREDICTED: thioredoxin-like 4, chloroplastic [Jatropha curcas][more]
gi|743787093|ref|XP_011029989.1|1.3e-6563.55PREDICTED: thioredoxin-like 4, chloroplastic isoform X2 [Populus euphratica][more]
gi|566202129|ref|XP_006374940.1|1.3e-6564.65hypothetical protein POPTR_0014s02920g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.232940.1Cucsa.232940.1mRNA
Cucsa.232940.2Cucsa.232940.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 23..150
score: 2.4
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 87..149
score: 2.
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 68..151
score: 3.61
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 92..149
score: 6.
NoneNo IPR availablePANTHERPTHR10438:SF229THIOREDOXIN-LIKE 4, CHLOROPLASTICcoord: 23..150
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.232940Cla022572Watermelon (97103) v1cgywmB433
Cucsa.232940Csa2G357300Cucumber (Chinese Long) v2cgycuB326
Cucsa.232940MELO3C010860Melon (DHL92) v3.5.1cgymeB389
Cucsa.232940ClCG08G015940Watermelon (Charleston Gray)cgywcgB407
Cucsa.232940CSPI02G19100Wild cucumber (PI 183967)cgycpiB341
Cucsa.232940Lsi08G014710Bottle gourd (USVL1VR-Ls)cgylsiB379
Cucsa.232940Cp4.1LG07g05320Cucurbita pepo (Zucchini)cgycpeB0614
Cucsa.232940MELO3C010860.2Melon (DHL92) v3.6.1cgymedB387
Cucsa.232940CsaV3_2G027800Cucumber (Chinese Long) v3cgycucB347
Cucsa.232940Cla97C08G159500Watermelon (97103) v2cgywmbB409
Cucsa.232940Bhi04G000320Wax gourdcgywgoB458
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.232940Melon (DHL92) v3.6.1cgymedB389
Cucsa.232940Silver-seed gourdcarcgyB0874
Cucsa.232940Cucumber (Chinese Long) v3cgycucB349
Cucsa.232940Watermelon (97103) v2cgywmbB408
Cucsa.232940Wax gourdcgywgoB461
Cucsa.232940Cucurbita maxima (Rimu)cgycmaB0638
Cucsa.232940Cucurbita maxima (Rimu)cgycmaB0639
Cucsa.232940Cucurbita maxima (Rimu)cgycmaB0642
Cucsa.232940Cucurbita moschata (Rifu)cgycmoB0641
Cucsa.232940Cucurbita moschata (Rifu)cgycmoB0642
Cucsa.232940Cucurbita moschata (Rifu)cgycmoB0643
Cucsa.232940Wild cucumber (PI 183967)cgycpiB343
Cucsa.232940Cucumber (Chinese Long) v2cgycuB328
Cucsa.232940Melon (DHL92) v3.5.1cgymeB391
Cucsa.232940Watermelon (Charleston Gray)cgywcgB405
Cucsa.232940Watermelon (Charleston Gray)cgywcgB406
Cucsa.232940Watermelon (97103) v1cgywmB434
Cucsa.232940Watermelon (97103) v1cgywmB435
Cucsa.232940Cucurbita pepo (Zucchini)cgycpeB0611
Cucsa.232940Cucurbita pepo (Zucchini)cgycpeB0612
Cucsa.232940Bottle gourd (USVL1VR-Ls)cgylsiB378