Cp4.1LG07g05320 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTGATAAAATTGATACTTTTGCTACCCATTCAATATTGGGCTTGGGCTGCTCCAACTTCTGATTTGTAGAAGAACCCATGAATCAATCCATGTCCACAAAACCTCCCACGTGAAAGGGAAATCAATGGCAACCAAAGGAAGAAGATAATGGTGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCAGAGGTAAGCCACTGGTCCAACATTTGTTGCTTTCCACCATCAATTTTGTACCTCCTAACAGTCATTTTTCATCTTTCTGAATCGTTCATCGAAATTGCCTCTTTGATTACTGTTAAATAACACAACAAGATTGAAATACTGAATTGAATGCTACATCTGAATCTGTTTTCATTAGTTTTCCGATAGAAGTTCATTCACTAAACAAGACCCAAATCCTATATGTTGCAATGCAAAGACAGAACCAGAATGTACTGAAATGTAAAGCATTACTCAGTGTTGGAAAGCTCGAATCGAGAATAATACCCATTTCAATTCCCTTCTGGTTGTCTGAAAACCCGCATGTTCGATTGTCGATTACAAGGCCCGAAGCTCCACCATATCTGAGTATCAGACATGAATTGATGTTCAAGAGTAAACCCAGAGTTGCTGCTGGAAATCAGGCGGGGTTGTCCGACGAAGACGATGATCTTTGCCCTGTAGAATGTGTGAGGGAGTTCAAGACGGATGAAGAGTTCATCAGAATTCTAGACAGGGCAAAGGAAAGTGGAGCGCTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGTTGCAAGTACATAGAACAAGGGTTTGCGAAATTGTGCAGGGGATCTGGAGATCAAGAGGCTCCGGTTATCTTCTTGAAGCACAATGTGAGTAATCCATATCAGAGAAGTTGTTTTGTTGGAGAAATGAATTTGATTCTGGAACTGAATGCTTGTGATTTTAGGTCGTTGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTGAGGATCAAGGTAAGTTTCTTTTCTCCTTCTTAATTAAATTATCTGAATGAACTCGTTGCTTCTGAAAATTTAGAGACTTAAACCATTTCTTAATCCCTTTTTCTAATCTTCAACAAATATCAAGAATGATTACCCATCCTCATCGATGAAAAGGGTATATGATCTGATCATCCTGTAGGTAACGAGGAGTTAGTGGTTTATTTTGTTGACTAATGTTGAAATTTGATGGGTGCAGACAGTGCCACTGTTCCACTTTTATAAAGATGGTGTGTTATTAGAAGCATTTCCCACTAGAGATAAAGAGAGGATTCTTGCAGCCATAACCAAATATTCATCCACTGCTCTTCAATTATGATTTTATCATTGTTCTTCTACACAAAACCTTTCTTATAATATCACCAAACAAACCCAAAATTCCGATACCAACCTCCATCTGTCCCTTCATCTGATATGAGTTCTTTGAACTATGTTCTTGATGAATATATTTGTTGTGAATTGTCACGATGATTTGGTTCATGAATTTCTTGGATTCATGGATGCTTTTGGTACATTTGCCATTTCAATTCATGAATCTATTGGATTCATTTAGTTCATCTCCCATATTGATACATTCTCTCATATTGGTACATGAATCATCTTAATTCGTGTATGAGCATTAGTATTGCTTTGATTCATGTATGAGAATTAATATTGTTAGGTCTGTATAAAGGTTTGTTACTAACATTGTTTTGAGACGTGGAGTTGTTGTCATTTTGTATTTGTCTAAAGACAATTGAGAGGAACTTTGTAAGTGAGACTTTGTAGCGTGAGAGTGTGAGAGATATACTTGTAAA AAATTGATAAAATTGATACTTTTGCTACCCATTCAATATTGGGCTTGGGCTGCTCCAACTTCTGATTTGTAGAAGAACCCATGAATCAATCCATGTCCACAAAACCTCCCACGTGAAAGGGAAATCAATGGCAACCAAAGGAAGAAGATAATGGTGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCAGAGTTTTCCGATAGAAGTTCATTCACTAAACAAGACCCAAATCCTATATGTTGCAATGCAAAGACAGAACCAGAATGTACTGAAATGTAAAGCATTACTCAGTGTTGGAAAGCTCGAATCGAGAATAATACCCATTTCAATTCCCTTCTGGTTGTCTGAAAACCCGCATGTTCGATTGTCGATTACAAGGCCCGAAGCTCCACCATATCTGAGTATCAGACATGAATTGATGTTCAAGAGTAAACCCAGAGTTGCTGCTGGAAATCAGGCGGGGTTGTCCGACGAAGACGATGATCTTTGCCCTGTAGAATGTGTGAGGGAGTTCAAGACGGATGAAGAGTTCATCAGAATTCTAGACAGGGCAAAGGAAAGTGGAGCGCTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGTTGCAAGTACATAGAACAAGGGTTTGCGAAATTGTGCAGGGGATCTGGAGATCAAGAGGCTCCGGTTATCTTCTTGAAGCACAATGTCGTTGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTGAGGATCAAGACAGTGCCACTGTTCCACTTTTATAAAGATGGTGTGTTATTAGAAGCATTTCCCACTAGAGATAAAGAGAGGATTCTTGCAGCCATAACCAAATATTCATCCACTGCTCTTCAATTATGATTTTATCATTGTTCTTCTACACAAAACCTTTCTTATAATATCACCAAACAAACCCAAAATTCCGATACCAACCTCCATCTGTCCCTTCATCTGATATGAGTTCTTTGAACTATGTTCTTGATGAATATATTTGTTGTGAATTGTCACGATGATTTGGTTCATGAATTTCTTGGATTCATGGATGCTTTTGGTACATTTGCCATTTCAATTCATGAATCTATTGGATTCATTTAGTTCATCTCCCATATTGATACATTCTCTCATATTGGTACATGAATCATCTTAATTCGTGTATGAGCATTAGTATTGCTTTGATTCATGTATGAGAATTAATATTGTTAGGTCTGTATAAAGGTTTGTTACTAACATTGTTTTGAGACGTGGAGTTGTTGTCATTTTGTATTTGTCTAAAGACAATTGAGAGGAACTTTGTAAGTGAGACTTTGTAGCGTGAGAGTGTGAGAGATATACTTGTAAA ATGGTGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCAGAGTTTTCCGATAGAAGTTCATTCACTAAACAAGACCCAAATCCTATATGTTGCAATGCAAAGACAGAACCAGAATGTACTGAAATGTAAAGCATTACTCAGTGTTGGAAAGCTCGAATCGAGAATAATACCCATTTCAATTCCCTTCTGGTTGTCTGAAAACCCGCATGTTCGATTGTCGATTACAAGGCCCGAAGCTCCACCATATCTGAGTATCAGACATGAATTGATGTTCAAGAGTAAACCCAGAGTTGCTGCTGGAAATCAGGCGGGGTTGTCCGACGAAGACGATGATCTTTGCCCTGTAGAATGTGTGAGGGAGTTCAAGACGGATGAAGAGTTCATCAGAATTCTAGACAGGGCAAAGGAAAGTGGAGCGCTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGTTGCAAGTACATAGAACAAGGGTTTGCGAAATTGTGCAGGGGATCTGGAGATCAAGAGGCTCCGGTTATCTTCTTGAAGCACAATGTCGTTGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTGAGGATCAAGACAGTGCCACTGTTCCACTTTTATAAAGATGGTGTGTTATTAGAAGCATTTCCCACTAGAGATAAAGAGAGGATTCTTGCAGCCATAACCAAATATTCATCCACTGCTCTTCAATTATGA MVESCHFLVRSCSSALLPAQSFPIEVHSLNKTQILYVAMQRQNQNVLKCKALLSVGKLESRIIPISIPFWLSENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQAGLSDEDDDLCPVECVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAITKYSSTALQL
BLAST of Cp4.1LG07g05320 vs. Swiss-Prot
Match: TRL4_ARATH (Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana GN=At1g07700 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.4e-60 Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. Swiss-Prot
Match: TRL4_ORYSJ (Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0567100 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.0e-53 Identity = 95/128 (74.22%), Postives = 114/128 (89.06%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. Swiss-Prot
Match: THIO_MOUSE (Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3) HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. Swiss-Prot
Match: THIO_RAT (Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09 Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. Swiss-Prot
Match: TRL2_ORYSJ (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0200100 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.1e-09 Identity = 48/159 (30.19%), Postives = 77/159 (48.43%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TrEMBL
Match: A0A0A0LP39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G357300 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 3.3e-86 Identity = 168/212 (79.25%), Postives = 184/212 (86.79%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TrEMBL
Match: E0CPV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10510 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64 Identity = 135/213 (63.38%), Postives = 154/213 (72.30%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TrEMBL
Match: I1K7Z7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G039900 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.7e-64 Identity = 132/203 (65.02%), Postives = 153/203 (75.37%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TrEMBL
Match: K7KHY6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G038900 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63 Identity = 134/217 (61.75%), Postives = 156/217 (71.89%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TrEMBL
Match: A0A0B2PA98_GLYSO (Thioredoxin-like 4, chloroplastic OS=Glycine soja GN=glysoja_019586 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63 Identity = 134/217 (61.75%), Postives = 156/217 (71.89%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TAIR10
Match: AT1G07700.3 (AT1G07700.3 Thioredoxin superfamily protein) HSP 1 Score: 233.0 bits (593), Expect = 1.9e-61 Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3) HSP 1 Score: 62.8 bits (151), Expect = 3.4e-10 Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TAIR10
Match: AT4G26160.1 (AT4G26160.1 atypical CYS HIS rich thioredoxin 1) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-09 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TAIR10
Match: AT4G29670.2 (AT4G29670.2 atypical CYS HIS rich thioredoxin 2) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1) HSP 1 Score: 57.0 bits (136), Expect = 1.9e-08 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. NCBI nr
Match: gi|659087759|ref|XP_008444622.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo]) HSP 1 Score: 327.8 bits (839), Expect = 1.6e-86 Identity = 168/212 (79.25%), Postives = 184/212 (86.79%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. NCBI nr
Match: gi|449466338|ref|XP_004150883.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis sativus]) HSP 1 Score: 326.2 bits (835), Expect = 4.7e-86 Identity = 168/212 (79.25%), Postives = 184/212 (86.79%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. NCBI nr
Match: gi|225458613|ref|XP_002284743.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Vitis vinifera]) HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64 Identity = 135/213 (63.38%), Postives = 154/213 (72.30%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. NCBI nr
Match: gi|571458843|ref|XP_006581243.1| (PREDICTED: thioredoxin-like 4, chloroplastic [Glycine max]) HSP 1 Score: 253.4 bits (646), Expect = 3.9e-64 Identity = 132/203 (65.02%), Postives = 153/203 (75.37%), Query Frame = 1
BLAST of Cp4.1LG07g05320 vs. NCBI nr
Match: gi|356510410|ref|XP_003523931.1| (PREDICTED: thioredoxin-like 4, chloroplastic isoform X1 [Glycine max]) HSP 1 Score: 251.5 bits (641), Expect = 1.5e-63 Identity = 134/217 (61.75%), Postives = 156/217 (71.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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