Cucsa.177520 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATTTTTCTGTATCCAATTTCACTCCCATCTTTTTCATCCATCGACTGATCAACGTTTCATCTCGCATTTTTTCATCCTCAATCCTTCACTATGACGCCGATTTTCGATACCGACGCCGGCGAGATGTTCGTCAGAATCGCCATGTTCGTCTTTATTCAGCTTCTTGTCTATTTGATTCTCTCCAAATCCTCCAATCTCTTCTCCAAAGACCAGAAAGTGAGATCTCTCAGCTTTAAACCGGCTCGTTCCGTCAGTATTCGCCGGTTTCTGGCCGCTCTTTCTGACCTTCCTCCCGGTGGTGAGCTTTCTCCGTCGACAAAAGTTTCCACTCCATCGTCGGCTCGTCGCGATCGTTCCGATGATGGTGGCAGGTTGTAAGGAGACGAATGGATGGGATCGAATTGAATTGGTTCCGATTGACCTGTTCTGGGTTTAGTCTTAGTCATGTAAAGTGAGAAAAGAGTAGGGGTGATTTGATTTTATGTTATTTGTTAAAGTTAGAAGGGTTGGTTTTGTGAATTTTGATTATTTGTATTTGTTATTTGAATGATTCTTTTGTTCTTTGGTAATGGTAATGGAAATTATTTGATCAATTGATCCATTT CTCATTTTTCTGTATCCAATTTCACTCCCATCTTTTTCATCCATCGACTGATCAACGTTTCATCTCGCATTTTTTCATCCTCAATCCTTCACTATGACGCCGATTTTCGATACCGACGCCGGCGAGATGTTCGTCAGAATCGCCATGTTCGTCTTTATTCAGCTTCTTGTCTATTTGATTCTCTCCAAATCCTCCAATCTCTTCTCCAAAGACCAGAAAGTGAGATCTCTCAGCTTTAAACCGGCTCGTTCCGTCAGTATTCGCCGGTTTCTGGCCGCTCTTTCTGACCTTCCTCCCGGTGGTGAGCTTTCTCCGTCGACAAAAGTTTCCACTCCATCGTCGGCTCGTCGCGATCGTTCCGATGATGGTGGCAGGTTGTAAGGAGACGAATGGATGGGATCGAATTGAATTGGTTCCGATTGACCTGTTCTGGGTTTAGTCTTAGTCATGTAAAGTGAGAAAAGAGTAGGGGTGATTTGATTTTATGTTATTTGTTAAAGTTAGAAGGGTTGGTTTTGTGAATTTTGATTATTTGTATTTGTTATTTGAATGATTCTTTTGTTCTTTGGTAATGGTAATGGAAATTATTTGATCAATTGATCCATTT ATGACGCCGATTTTCGATACCGACGCCGGCGAGATGTTCGTCAGAATCGCCATGTTCGTCTTTATTCAGCTTCTTGTCTATTTGATTCTCTCCAAATCCTCCAATCTCTTCTCCAAAGACCAGAAAGTGAGATCTCTCAGCTTTAAACCGGCTCGTTCCGTCAGTATTCGCCGGTTTCTGGCCGCTCTTTCTGACCTTCCTCCCGGTGGTGAGCTTTCTCCGTCGACAAAAGTTTCCACTCCATCGTCGGCTCGTCGCGATCGTTCCGATGATGGTGGCAGGTTGTAA MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSKDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL*
BLAST of Cucsa.177520 vs. TrEMBL
Match: A0A0A0LD48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G706170 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19 Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 1
BLAST of Cucsa.177520 vs. TrEMBL
Match: U7DUH6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0650s00210g PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17 Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1
BLAST of Cucsa.177520 vs. TrEMBL
Match: U5G004_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02920g PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.8e-17 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1
BLAST of Cucsa.177520 vs. TrEMBL
Match: F6HPS7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00150 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.3e-17 Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 1
BLAST of Cucsa.177520 vs. TrEMBL
Match: B9REM2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1775700 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 8.3e-17 Identity = 49/74 (66.22%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Cucsa.177520 vs. TAIR10
Match: AT2G31945.1 (AT2G31945.1 unknown protein) HSP 1 Score: 77.4 bits (189), Expect = 5.3e-15 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 1
BLAST of Cucsa.177520 vs. TAIR10
Match: AT1G05575.1 (AT1G05575.1 unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 1.0e-13 Identity = 37/65 (56.92%), Postives = 51/65 (78.46%), Query Frame = 1
BLAST of Cucsa.177520 vs. NCBI nr
Match: gi|778682889|ref|XP_011651805.1| (PREDICTED: uncharacterized protein LOC105434941 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42 Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1
BLAST of Cucsa.177520 vs. NCBI nr
Match: gi|659123611|ref|XP_008461750.1| (PREDICTED: uncharacterized protein LOC103500281 [Cucumis melo]) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32 Identity = 79/95 (83.16%), Postives = 83/95 (87.37%), Query Frame = 1
BLAST of Cucsa.177520 vs. NCBI nr
Match: gi|700203499|gb|KGN58632.1| (hypothetical protein Csa_3G706170 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-19 Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 1
BLAST of Cucsa.177520 vs. NCBI nr
Match: gi|672110920|ref|XP_008797977.1| (PREDICTED: uncharacterized protein LOC103713005 [Phoenix dactylifera]) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17 Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 1
BLAST of Cucsa.177520 vs. NCBI nr
Match: gi|566255179|ref|XP_006387711.1| (hypothetical protein POPTR_0650s00210g [Populus trichocarpa]) HSP 1 Score: 96.7 bits (239), Expect = 2.4e-17 Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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