Cucsa.153330 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCTTTCGGCTTCTCCTTtCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAA CTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGcttctcctcctcctcctccacctcctcTCTTTCGGCTTCTCCTTTCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAA CTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCTTTCGGCTTCTCCTTtCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAA LCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSHYHQRWFPFGYR*
BLAST of Cucsa.153330 vs. TrEMBL
Match: A0A0A0KZ55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280660 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.0e-52 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. TrEMBL
Match: A0A061GR99_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_040264 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 8.3e-31 Identity = 65/100 (65.00%), Postives = 76/100 (76.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. TrEMBL
Match: A0A0D2VJW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G248300 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.7e-29 Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. TrEMBL
Match: M5WKK9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013462mg PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-29 Identity = 60/98 (61.22%), Postives = 77/98 (78.57%), Query Frame = 1
BLAST of Cucsa.153330 vs. TrEMBL
Match: A0A0B2RVZ3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004241 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28 Identity = 64/103 (62.14%), Postives = 81/103 (78.64%), Query Frame = 1
BLAST of Cucsa.153330 vs. TAIR10
Match: AT5G19875.1 (AT5G19875.1 unknown protein) HSP 1 Score: 119.4 bits (298), Expect = 1.3e-27 Identity = 51/100 (51.00%), Postives = 71/100 (71.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. TAIR10
Match: AT2G31940.1 (AT2G31940.1 unknown protein) HSP 1 Score: 105.9 bits (263), Expect = 1.5e-23 Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Cucsa.153330 vs. TAIR10
Match: AT2G21180.1 (AT2G21180.1 unknown protein) HSP 1 Score: 47.4 bits (111), Expect = 6.3e-06 Identity = 30/105 (28.57%), Postives = 46/105 (43.81%), Query Frame = 1
BLAST of Cucsa.153330 vs. NCBI nr
Match: gi|700198931|gb|KGN54089.1| (hypothetical protein Csa_4G280660 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 1.4e-52 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. NCBI nr
Match: gi|590582936|ref|XP_007014761.1| (Uncharacterized protein TCM_040264 [Theobroma cacao]) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 65/100 (65.00%), Postives = 76/100 (76.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. NCBI nr
Match: gi|823259654|ref|XP_012462541.1| (PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii]) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-29 Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. NCBI nr
Match: gi|1009124038|ref|XP_015878858.1| (PREDICTED: uncharacterized protein LOC107415088 [Ziziphus jujuba]) HSP 1 Score: 135.6 bits (340), Expect = 5.0e-29 Identity = 62/100 (62.00%), Postives = 79/100 (79.00%), Query Frame = 1
BLAST of Cucsa.153330 vs. NCBI nr
Match: gi|595830851|ref|XP_007206151.1| (hypothetical protein PRUPE_ppa013462mg [Prunus persica]) HSP 1 Score: 135.6 bits (340), Expect = 5.0e-29 Identity = 60/98 (61.22%), Postives = 77/98 (78.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|