Cp4.1LG16g09130 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG16g09130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionOxidoreductase/transition metal ion-binding protein
LocationCp4.1LG16 : 8494587 .. 8494961 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCCCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTCATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGATTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCGGCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCACCAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGATATAGATAA

mRNA sequence

ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCCCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTCATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGATTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCGGCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCACCAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGATATAGATAA

Coding sequence (CDS)

ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCCCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTCATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGATTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCGGCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCACCAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGATATAGATAA

Protein sequence

MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFPFGYR
BLAST of Cp4.1LG16g09130 vs. TrEMBL
Match: A0A0A0KZ55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280660 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.8e-52
Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARY YY+RYPYLEYLTLPPLQLCVF  ILL+VMAFSWY FY SFLED IFQLKLFLLTV
Sbjct: 1   MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTV 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PL+LLLLLHLLS G  FL+PLPEQ+SLHRAGGSPWGVAILLVF LYVISHQSHYH+RWFP
Sbjct: 61  PLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSHYHQRWFP 120

Query: 121 FGYR 125
           FGYR
Sbjct: 121 FGYR 124

BLAST of Cp4.1LG16g09130 vs. TrEMBL
Match: A0A061GR99_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_040264 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.4e-34
Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  +L+YL+LPPL LC F  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RDSFLDYLSLPPLHLCFFVSILFFVLGFSWYINYESMFEDFINQLKFFLMLS 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLL+H  S  +PFL+PLPEQ+SLHR GGSPWGVA+LLVFLLY+IS+QS +H RWFP
Sbjct: 61  PVVLLLLIHCFSGSVPFLIPLPEQDSLHRTGGSPWGVALLLVFLLYMISYQSSFHERWFP 119

Query: 121 FG 123
            G
Sbjct: 121 LG 119

BLAST of Cp4.1LG16g09130 vs. TrEMBL
Match: A0A0D2VJW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G248300 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-32
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  Y++YL+LPPL LC F  IL  V+ FSWY+ Y+S LED + QLK FL+  
Sbjct: 1   MARYY---RDSYMDYLSLPPLHLCFFISILFFVLGFSWYLNYESVLEDFMNQLKFFLMLA 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLLLH  S  +P L+P PE++SLHRAGGSPWGVA++LV LLY+IS+QS++H RWFP
Sbjct: 61  PIVLLLLLHCFSGRVPSLIPEPEKDSLHRAGGSPWGVALVLVLLLYMISYQSYFHERWFP 119

Query: 121 FG 123
           FG
Sbjct: 121 FG 119

BLAST of Cp4.1LG16g09130 vs. TrEMBL
Match: A0A0D2QXH1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G017800 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.5e-29
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MAR Y Y  Y +++ L+ PPL LC F  IL  ++  SWYI Y+S LED+  QLKLFLL V
Sbjct: 1   MARNYNYSSYSFIDDLSPPPLHLCFFIIILFFMLGLSWYINYESKLEDLTIQLKLFLLLV 60

Query: 61  PLILLLLLHLLSL-GLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWF 120
           P++LLLL+H LS   L F+VP  +Q+SLHRAGGSPWGVA++LV ++Y+IS+QS++H RWF
Sbjct: 61  PVVLLLLVHCLSAESLDFVVPFTDQDSLHRAGGSPWGVALVLVVVIYMISYQSYFHERWF 120

Query: 121 PFGYR 125
           PFG +
Sbjct: 121 PFGIK 125

BLAST of Cp4.1LG16g09130 vs. TrEMBL
Match: A0A059D9K9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03628 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.3e-29
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYYY +RY  LE+L+ P L LC F  +L LV+ FSWYI Y+   ED++ Q+KLFL+  
Sbjct: 1   MARYYY-NRYSILEHLSFP-LHLCFFVLVLFLVLGFSWYINYEYMFEDLVTQMKLFLMLC 60

Query: 61  PLILLLLLHLLSLG----LPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHR 120
           P++LLL++H LS      +P +V LPE+ SLHRAGGSPWGVA+LLVFLLY+ISHQS +H 
Sbjct: 61  PIVLLLVVHFLSAADRRRVPLIVSLPEKESLHRAGGSPWGVALLLVFLLYLISHQSTFHV 120

BLAST of Cp4.1LG16g09130 vs. TAIR10
Match: AT5G19875.1 (AT5G19875.1 unknown protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-26
Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MAR  YY    YL+YL+LP   LC    ++  V++F+WY+ ++S +ED +  LKL  +  
Sbjct: 1   MARSPYYGS-SYLDYLSLPNPHLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFT 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PL LLLL+H  S GL F VP PEQ+S+HRAG SPWGVA +LV +L+++S+QS +  RWFP
Sbjct: 61  PLFLLLLVHFFSGGLSFYVPWPEQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERWFP 120

Query: 121 FG 123
           FG
Sbjct: 121 FG 121

BLAST of Cp4.1LG16g09130 vs. TAIR10
Match: AT2G31940.1 (AT2G31940.1 unknown protein)

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-19
Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = 1

Query: 20  PLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLILLLLLHLLS----LG- 79
           PL LCVF  ILL+ +  SWY  Y+  +E   +Q KL L+  PL+LLL +H LS    +G 
Sbjct: 12  PLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQGVGG 71

Query: 80  -LPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 121
            +  L+ L E+ SL+RAGG+PWGVA +LVFL +++S+QS +  RWFP
Sbjct: 72  MMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFP 118

BLAST of Cp4.1LG16g09130 vs. TAIR10
Match: AT5G42146.1 (AT5G42146.1 unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 36/108 (33.33%), Postives = 56/108 (51.85%), Query Frame = 1

Query: 19  PPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLILLLLL------HLLS 78
           PPL L     I+ L++  S Y  Y   +E     LKLF+L +P++ + +L      H L 
Sbjct: 28  PPLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSFVHRLL 87

Query: 79  LGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 121
               + V   +  SL   G  PWGV ++L+ LL ++S QS++H  W+P
Sbjct: 88  FKSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWYP 135

BLAST of Cp4.1LG16g09130 vs. NCBI nr
Match: gi|700198931|gb|KGN54089.1| (hypothetical protein Csa_4G280660 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARY YY+RYPYLEYLTLPPLQLCVF  ILL+VMAFSWY FY SFLED IFQLKLFLLTV
Sbjct: 1   MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTV 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PL+LLLLLHLLS G  FL+PLPEQ+SLHRAGGSPWGVAILLVF LYVISHQSHYH+RWFP
Sbjct: 61  PLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSHYHQRWFP 120

Query: 121 FGYR 125
           FGYR
Sbjct: 121 FGYR 124

BLAST of Cp4.1LG16g09130 vs. NCBI nr
Match: gi|590582936|ref|XP_007014761.1| (Uncharacterized protein TCM_040264 [Theobroma cacao])

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33
Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  +L+YL+LPPL LC F  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RDSFLDYLSLPPLHLCFFVSILFFVLGFSWYINYESMFEDFINQLKFFLMLS 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLL+H  S  +PFL+PLPEQ+SLHR GGSPWGVA+LLVFLLY+IS+QS +H RWFP
Sbjct: 61  PVVLLLLIHCFSGSVPFLIPLPEQDSLHRTGGSPWGVALLLVFLLYMISYQSSFHERWFP 119

Query: 121 FG 123
            G
Sbjct: 121 LG 119

BLAST of Cp4.1LG16g09130 vs. NCBI nr
Match: gi|823259654|ref|XP_012462541.1| (PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii])

HSP 1 Score: 146.4 bits (368), Expect = 3.4e-32
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  Y++YL+LPPL LC F  IL  V+ FSWY+ Y+S LED + QLK FL+  
Sbjct: 1   MARYY---RDSYMDYLSLPPLHLCFFISILFFVLGFSWYLNYESVLEDFMNQLKFFLMLA 60

Query: 61  PLILLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLLLH  S  +P L+P PE++SLHRAGGSPWGVA++LV LLY+IS+QS++H RWFP
Sbjct: 61  PIVLLLLLHCFSGRVPSLIPEPEKDSLHRAGGSPWGVALVLVLLLYMISYQSYFHERWFP 119

Query: 121 FG 123
           FG
Sbjct: 121 FG 119

BLAST of Cp4.1LG16g09130 vs. NCBI nr
Match: gi|763754500|gb|KJB21831.1| (hypothetical protein B456_004G017800 [Gossypium raimondii])

HSP 1 Score: 135.2 bits (339), Expect = 7.9e-29
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MAR Y Y  Y +++ L+ PPL LC F  IL  ++  SWYI Y+S LED+  QLKLFLL V
Sbjct: 1   MARNYNYSSYSFIDDLSPPPLHLCFFIIILFFMLGLSWYINYESKLEDLTIQLKLFLLLV 60

Query: 61  PLILLLLLHLLSL-GLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWF 120
           P++LLLL+H LS   L F+VP  +Q+SLHRAGGSPWGVA++LV ++Y+IS+QS++H RWF
Sbjct: 61  PVVLLLLVHCLSAESLDFVVPFTDQDSLHRAGGSPWGVALVLVVVIYMISYQSYFHERWF 120

Query: 121 PFGYR 125
           PFG +
Sbjct: 121 PFGIK 125

BLAST of Cp4.1LG16g09130 vs. NCBI nr
Match: gi|702278809|ref|XP_010044963.1| (PREDICTED: uncharacterized protein LOC104433794 [Eucalyptus grandis])

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 1

Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYYY +RY  LE+L+ P L LC F  +L LV+ FSWYI Y+   ED++ Q+KLFL+  
Sbjct: 1   MARYYY-NRYSILEHLSFP-LHLCFFVLVLFLVLGFSWYINYEYMFEDLVTQMKLFLMLC 60

Query: 61  PLILLLLLHLLSLG----LPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHR 120
           P++LLL++H LS      +P +V LPE+ SLHRAGGSPWGVA+LLVFLLY+ISHQS +H 
Sbjct: 61  PIVLLLVVHFLSAADRRRVPLIVSLPEKESLHRAGGSPWGVALLLVFLLYLISHQSTFHV 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KZ55_CUCSA7.8e-5287.10Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280660 PE=4 SV=1[more]
A0A061GR99_THECC7.4e-3463.93Uncharacterized protein OS=Theobroma cacao GN=TCM_040264 PE=4 SV=1[more]
A0A0D2VJW7_GOSRA2.4e-3261.48Uncharacterized protein OS=Gossypium raimondii GN=B456_013G248300 PE=4 SV=1[more]
A0A0D2QXH1_GOSRA5.5e-2957.60Uncharacterized protein OS=Gossypium raimondii GN=B456_004G017800 PE=4 SV=1[more]
A0A059D9K9_EUCGR9.3e-2959.68Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03628 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19875.11.3e-2650.82 unknown protein[more]
AT2G31940.11.6e-1948.60 unknown protein[more]
AT5G42146.11.4e-0733.33 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700198931|gb|KGN54089.1|1.1e-5187.10hypothetical protein Csa_4G280660 [Cucumis sativus][more]
gi|590582936|ref|XP_007014761.1|1.1e-3363.93Uncharacterized protein TCM_040264 [Theobroma cacao][more]
gi|823259654|ref|XP_012462541.1|3.4e-3261.48PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii][more]
gi|763754500|gb|KJB21831.1|7.9e-2957.60hypothetical protein B456_004G017800 [Gossypium raimondii][more]
gi|702278809|ref|XP_010044963.1|1.3e-2859.68PREDICTED: uncharacterized protein LOC104433794 [Eucalyptus grandis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g09130.1Cp4.1LG16g09130.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33306FAMILY NOT NAMEDcoord: 1..124
score: 2.6
NoneNo IPR availablePANTHERPTHR33306:SF3SUBFAMILY NOT NAMEDcoord: 1..124
score: 2.6

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG16g09130Cp4.1LG12g07090Cucurbita pepo (Zucchini)cpecpeB156