CSPI07G19700 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATACCCACTCTCAGCCCACTTTTCCTCTTCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCTGCCGTGGAAGACGTTTTCGACCAACTCAAGCTCCTCCTCATCGTCTCACCTCTTCTCCTACTCCTCCTCGTCCACTGGCTCTCCAACACCAAAAGCGGTCACTTGCCATCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCATCGCGCTGGAGGAACACCTTGGGGCGTGGGGTTTTTGTTGGTTCTTCTTCTTTTCATGGTCTCTTATCAATCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGCCGGTGA ATGGCAAATACCCACTCTCAGCCCACTTTTCCTCTTCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCTGCCGTGGAAGACGTTTTCGACCAACTCAAGCTCCTCCTCATCGTCTCACCTCTTCTCCTACTCCTCCTCGTCCACTGGCTCTCCAACACCAAAAGCGGTCACTTGCCATCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCATCGCGCTGGAGGAACACCTTGGGGCGTGGGGTTTTTGTTGGTTCTTCTTCTTTTCATGGTCTCTTATCAATCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGCCGGTGA ATGGCAAATACCCACTCTCAGCCCACTTTTCCTCTTCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCTGCCGTGGAAGACGTTTTCGACCAACTCAAGCTCCTCCTCATCGTCTCACCTCTTCTCCTACTCCTCCTCGTCCACTGGCTCTCCAACACCAAAAGCGGTCACTTGCCATCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCATCGCGCTGGAGGAACACCTTGGGGCGTGGGGTTTTTGTTGGTTCTTCTTCTTTTCATGGTCTCTTATCAATCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGCCGGTGA
BLAST of CSPI07G19700 vs. TrEMBL
Match: A0A0A0K9W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429630 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 8.1e-62 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of CSPI07G19700 vs. TrEMBL
Match: M5X5I1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021264mg PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.4e-45 Identity = 89/115 (77.39%), Postives = 99/115 (86.09%), Query Frame = 1
BLAST of CSPI07G19700 vs. TrEMBL
Match: F6HPS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00100 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.3e-40 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 1
BLAST of CSPI07G19700 vs. TrEMBL
Match: A2Q3C9_MEDTR (Oxidoreductase/transition metal ion-binding protein OS=Medicago truncatula GN=MTR_2g062220 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.3e-40 Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 1
BLAST of CSPI07G19700 vs. TrEMBL
Match: A0A0L9UJS0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g042300 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 3.0e-40 Identity = 85/120 (70.83%), Postives = 99/120 (82.50%), Query Frame = 1
BLAST of CSPI07G19700 vs. TAIR10
Match: AT2G31940.1 (AT2G31940.1 unknown protein) HSP 1 Score: 136.7 bits (343), Expect = 9.2e-33 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1
BLAST of CSPI07G19700 vs. TAIR10
Match: AT5G19875.1 (AT5G19875.1 unknown protein) HSP 1 Score: 129.0 bits (323), Expect = 1.9e-30 Identity = 62/103 (60.19%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of CSPI07G19700 vs. TAIR10
Match: AT2G21180.1 (AT2G21180.1 unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10 Identity = 37/118 (31.36%), Postives = 59/118 (50.00%), Query Frame = 1
BLAST of CSPI07G19700 vs. TAIR10
Match: AT5G42146.1 (AT5G42146.1 unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08 Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 1
BLAST of CSPI07G19700 vs. TAIR10
Match: AT3G06890.1 (AT3G06890.1 unknown protein) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06 Identity = 24/71 (33.80%), Postives = 45/71 (63.38%), Query Frame = 1
BLAST of CSPI07G19700 vs. NCBI nr
Match: gi|778728781|ref|XP_011659474.1| (PREDICTED: uncharacterized protein LOC101219783 [Cucumis sativus]) HSP 1 Score: 244.2 bits (622), Expect = 1.2e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of CSPI07G19700 vs. NCBI nr
Match: gi|659122603|ref|XP_008461231.1| (PREDICTED: uncharacterized protein LOC103499879 [Cucumis melo]) HSP 1 Score: 236.1 bits (601), Expect = 3.2e-59 Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of CSPI07G19700 vs. NCBI nr
Match: gi|596042068|ref|XP_007220118.1| (hypothetical protein PRUPE_ppa021264mg [Prunus persica]) HSP 1 Score: 190.3 bits (482), Expect = 2.0e-45 Identity = 89/115 (77.39%), Postives = 99/115 (86.09%), Query Frame = 1
BLAST of CSPI07G19700 vs. NCBI nr
Match: gi|297741206|emb|CBI32157.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 172.9 bits (437), Expect = 3.3e-40 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 1
BLAST of CSPI07G19700 vs. NCBI nr
Match: gi|357451093|ref|XP_003595823.1| (oxidoreductase/transition metal ion-binding protein [Medicago truncatula]) HSP 1 Score: 172.9 bits (437), Expect = 3.3e-40 Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|