CSPI02G13020 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGAAGGATGAACAGCAGAGCACAAATTGCCATTTTTTTACAACCTTTTCTGGTTGTTTCTGACTCTTTTTGTTTTTTTTGACTCGTAATAGAATTTTGTAGAATGGAATGCCCTTATTGCCTGTAAATGAATGCCATACGGTGCATTTACCAACAGAAATTAATTAAAAGGATACACAAATTTACCCTCAATTTCTTTATAGCCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGGTACCATCTTGAAGATTCAAACTTCAAAGTTTAACATATCCGAAGCAAACTTGATTCTTATGTGCCAATTTAAAATTTTCGATTGAAAGTTTACTCTTGGTTTGATCTAATAAAAAAGGTCCTTATCCATCATATGCGCCACTCCAGTTAATTATGTAGTATTGATGGCTGAGATTGGGAGAGCTGTCTTATAGAAGACATAGTGAGAAATTACTTATGATATATATTTACTGTAAAATATGATTCAGTATTTGAGATTTGTCTTGGAGGCCAACAAATAAATAACATTTACACTTTTTGATGTTGGGTGTTTATGAAGAATTAAAACGTTACTTTGAAAAAGAGAGAGAATCTAATTTTAAAGATTTTTCTTTTTGGATTGAACAACTTTTCTGCAACTGCTTTGTGTTTCATAACATTGCCAATGCAACTAGTAGATAATTATAACTTATCACATGGATATGCTTCCGCTTATTTTTCCTTTTCTGCTCTCTTTCATTTCAACCATATAATTTCTTTATTTGAAAATGTGGACCAAATCTAACTAAGAATTGAGACACATGAGGAAGTGAGTGTATAACAATCAACTGAACAAATCCATGTGAGCTTTAAATAGAACTGGCCCCCTAACACACCAAGCTGCTATCCACTCTCCACTTGCTTCCCTCTTTAACTCTATAAATACACATGTTAAAGAAGTTACCAGTACCCAACTTAAATCTCTCTTACAAGTTCTTCTTTCAATCACTCCAATTTCCCATTGATTCTTATAGTTCTCTCCCTTGAATCAATTTTAGACATGGGAATCCGATTGCCTTCGCTACTCCTCAATGCCAAGCAAATTCTCAAAAAGCATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGAAAGATTTTTGTTCAAATGAAATCCCTTCCTCAACCTCCCAAGTTTTGCCAAATATAGTTTTGTTCATTTTGAGTTAGACAAAGTAGAAGGCCGCTGAACAGTTTTTTTTCTTTCTTTTTTTTGTAAATTAGGGGATAGAAAAGGTTGTTAATTTGCCTTTCTTCCTGATCTTCGTAATGTGTATAAAGTTGTATCAACACGGTAACAACAGGAGTAATAGAAAATTACACTTGTTTACAGATAAA ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAACCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGTTCTCTCCCTTGAATCAATTTTAGACATGGGAATCCGATTGCCTTCGCTACTCCTCAATGCCAAGCAAATTCTCAAAAAGCATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAACCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGTTCTCTCCCTTGAATCAATTTTAGACATGGGAATCCGATTGCCTTCGCTACTCCTCAATGCCAAGCAAATTCTCAAAAAGCATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA
BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.5e-25 Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 1
BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.6e-24 Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 1
BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.2e-24 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23 Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 1
BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A103Y7U2_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_017573 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 4.9e-52 Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A103Y0U0_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47 Identity = 109/225 (48.44%), Postives = 141/225 (62.67%), Query Frame = 1
BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A0A0LLG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258800 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.4e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A118K004_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 3.4e-45 Identity = 100/218 (45.87%), Postives = 133/218 (61.01%), Query Frame = 1
BLAST of CSPI02G13020 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 3.1e-26 Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of CSPI02G13020 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 3.1e-26 Identity = 55/97 (56.70%), Postives = 76/97 (78.35%), Query Frame = 1
BLAST of CSPI02G13020 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.2 bits (287), Expect = 5.4e-26 Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 1
BLAST of CSPI02G13020 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25 Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 1
BLAST of CSPI02G13020 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|731387410|ref|XP_002271660.2| (PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera]) HSP 1 Score: 239.6 bits (610), Expect = 5.3e-60 Identity = 130/242 (53.72%), Postives = 163/242 (67.36%), Query Frame = 1
BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|731387429|ref|XP_002271861.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100249577 [Vitis vinifera]) HSP 1 Score: 238.4 bits (607), Expect = 1.2e-59 Identity = 127/228 (55.70%), Postives = 158/228 (69.30%), Query Frame = 1
BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|731387422|ref|XP_002271994.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vinifera]) HSP 1 Score: 227.6 bits (579), Expect = 2.1e-56 Identity = 124/228 (54.39%), Postives = 154/228 (67.54%), Query Frame = 1
BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|645262556|ref|XP_008236815.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103335582 [Prunus mume]) HSP 1 Score: 212.6 bits (540), Expect = 7.0e-52 Identity = 115/226 (50.88%), Postives = 150/226 (66.37%), Query Frame = 1
BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|976918972|gb|KVI04121.1| (hypothetical protein Ccrd_017573, partial [Cynara cardunculus var. scolymus]) HSP 1 Score: 212.6 bits (540), Expect = 7.0e-52 Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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