ClCG03G004440 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGCTTTCTGAGTCCCCGAAGATCCAAACCGGGAACAGCAACAACACCCGACAACCAAGGAAGTGATGAAAAAGAAACCCACTTCAAAGCAAACCAAAGATCTTCGAGTACTTCAAGTTTGAACTCATCAAAATCCACAACGAAGCATCAGCCACAAATAGCAGCCACAAACAACAGTATTTTGAGCTTCAAATCTGCCCCTGAATCAAGCTTTACATCATCAGATGCTTCCTCTCGCACAACCAAATCAACAACTCGACCTACGACTTCAAAGAAGAATGCAAAAGCTGGGACTGGTTCTCGTGCTAAACCAACCCTGGTTACCAAGGATAATACTGCGAGTCATAAGTATTTTGACACTCCAAATGCTTCTCCCACCCATTTCCCCAGCTCTGCTAGACTTGCTGTTCCTGTTCTTCACAATCAACTCCAACATCGTCTCTCTATTGACGACGGTGAGCTTACATAATACTTAATTACAAATTTTTTTTTTTCTTCTTCTTCTATATTTATGATCCCACTATTTACTACCCTTTCGTCAAAATTTAATTTTTTTTTGTTGGCCTATACGAATTTACTCCTTTGAGTTTAATTAATATCTATTTAGATCTCAAGTTTTTTAAAATTCACAGATGTAGTATTCCGTTCTTGTTCTTCAAAAACTACTTACGCTCCATTTGATAATGATTTTTTCTTTTTTTCTTTTTTATAGTTTTCTGTTCTTTAAGTTTCTGTTTTTCCTTTCAATCTCTGTTATTATTTTTGTAATTCTTAGATGTAGATCACATTCGAATAAAATTGATTATAAAAATATGAAAGTATAGGTAAGATCAAGAGGTGGACCTTTCTTTTTTATGACTCATCCATAAGAACTCTAAATTGTGCTTAGCTTGGAGTTATCCTATTTGTTAGTTACCTCTTGAAAATATTCTTACTTATATTTAGAAATAGTGTTTATAAGCTTAATTTCAAATAGTTCTCAAACGAGCTTAATTTCTAAAAATATGTAAAAAAACCGAACAAGTGCAAATCAACATTAGTTGGGAAGGAACAATATTGTAGGAGTTTAAACACATGATCTCCTTAGAGTTTATAGACTTAATTTTCAAAATCCACATGATTAAAGGATCTACAATTTTTACTTTATATATATGAGTAATTGTGTTGGGTATCACTTTTAAGAGATAATAATTAAGTGCATAGTAACATTTTAAAAAATTGTAAATATAGCTAAATATATCACAGTCTATCACTAAAAGACTCTACTAGAAATATGGTCTATCACTAGTTGACCCCTACTATTGATATAGTCTATTAGTAATAGACCCCTATTAATGGTATGGTCTATAGACTTCAAAAATAGGATTTAAATTTTTATATCTGCAAATTCTTTTGCATCGTGTTATATCTACAAATATTTTGAATCTAATTGCTATATTTGCAATTACCCCTCTCTTGAAAATCTTGTGCGTAGGTAAAAATGGTGTTGCGAGCAATGTTCTTCATACAAATTCGATAAATGAATCAGTGAGTTCAGGCACAAACGAACAATATGATTCTCAAAGCAATACTCCAACAATATTATCTAAAATTTACGAGGAGATTGCGTCTCATCGTAAAGGAAACACATCCATTAAATCTTACTTCAGAAATCTCAAGGCATTATGGGATGAGCCAGCTCCAACCTTCAGTGAATTGCCTCAATCTTCATCCAAAGCAATTGTGGAGCAGAGTGAGCTCTTAGAAAGAGAAAAACTAATGCAATTTCTTTTGGGATTAAACATTTCTTATTCCTCCCTTTGCTCCCAAATCCTTCTTTTGAGCCCATCTCCAACCCTCGACGAAGCTTATTCTCTCATAATTCAAGAACAAAGAAGTAGGAAAATGGGGAAAAAGAATTCAAATTAA ATGAGAGGCTTTCTGAGTCCCCGAAGATCCAAACCGGGAACAGCAACAACACCCGACAACCAAGGAAGTGATGAAAAAGAAACCCACTTCAAAGCAAACCAAAGATCTTCGAGTACTTCAAGTTTGAACTCATCAAAATCCACAACGAAGCATCAGCCACAAATAGCAGCCACAAACAACAGTATTTTGAGCTTCAAATCTGCCCCTGAATCAAGCTTTACATCATCAGATGCTTCCTCTCGCACAACCAAATCAACAACTCGACCTACGACTTCAAAGAAGAATGCAAAAGCTGGGACTGGTTCTCGTGCTAAACCAACCCTGGTTACCAAGGATAATACTGCGAGTCATAAGTATTTTGACACTCCAAATGCTTCTCCCACCCATTTCCCCAGCTCTGCTAGACTTGCTGTTCCTGTTCTTCACAATCAACTCCAACATCGTCTCTCTATTGACGACGGTAAAAATGGTGTTGCGAGCAATGTTCTTCATACAAATTCGATAAATGAATCAGTGAGTTCAGGCACAAACGAACAATATGATTCTCAAAGCAATACTCCAACAATATTATCTAAAATTTACGAGGAGATTGCGTCTCATCGTAAAGGAAACACATCCATTAAATCTTACTTCAGAAATCTCAAGGCATTATGGGATGAGCCAGCTCCAACCTTCAGTGAATTGCCTCAATCTTCATCCAAAGCAATTGTGGAGCAGAGTGAGCTCTTAGAAAGAGAAAAACTAATGCAATTTCTTTTGGGATTAAACATTTCTTATTCCTCCCTTTGCTCCCAAATCCTTCTTTTGAGCCCATCTCCAACCCTCGACGAAGCTTATTCTCTCATAATTCAAGAACAAAGAAGTAGGAAAATGGGGAAAAAGAATTCAAATTAA ATGAGAGGCTTTCTGAGTCCCCGAAGATCCAAACCGGGAACAGCAACAACACCCGACAACCAAGGAAGTGATGAAAAAGAAACCCACTTCAAAGCAAACCAAAGATCTTCGAGTACTTCAAGTTTGAACTCATCAAAATCCACAACGAAGCATCAGCCACAAATAGCAGCCACAAACAACAGTATTTTGAGCTTCAAATCTGCCCCTGAATCAAGCTTTACATCATCAGATGCTTCCTCTCGCACAACCAAATCAACAACTCGACCTACGACTTCAAAGAAGAATGCAAAAGCTGGGACTGGTTCTCGTGCTAAACCAACCCTGGTTACCAAGGATAATACTGCGAGTCATAAGTATTTTGACACTCCAAATGCTTCTCCCACCCATTTCCCCAGCTCTGCTAGACTTGCTGTTCCTGTTCTTCACAATCAACTCCAACATCGTCTCTCTATTGACGACGGTAAAAATGGTGTTGCGAGCAATGTTCTTCATACAAATTCGATAAATGAATCAGTGAGTTCAGGCACAAACGAACAATATGATTCTCAAAGCAATACTCCAACAATATTATCTAAAATTTACGAGGAGATTGCGTCTCATCGTAAAGGAAACACATCCATTAAATCTTACTTCAGAAATCTCAAGGCATTATGGGATGAGCCAGCTCCAACCTTCAGTGAATTGCCTCAATCTTCATCCAAAGCAATTGTGGAGCAGAGTGAGCTCTTAGAAAGAGAAAAACTAATGCAATTTCTTTTGGGATTAAACATTTCTTATTCCTCCCTTTGCTCCCAAATCCTTCTTTTGAGCCCATCTCCAACCCTCGACGAAGCTTATTCTCTCATAATTCAAGAACAAAGAAGTAGGAAAATGGGGAAAAAGAATTCAAATTAA MRGFLSPRRSKPGTATTPDNQGSDEKETHFKANQRSSSTSSLNSSKSTTKHQPQIAATNNSILSFKSAPESSFTSSDASSRTTKSTTRPTTSKKNAKAGTGSRAKPTLVTKDNTASHKYFDTPNASPTHFPSSARLAVPVLHNQLQHRLSIDDGKNGVASNVLHTNSINESVSSGTNEQYDSQSNTPTILSKIYEEIASHRKGNTSIKSYFRNLKALWDEPAPTFSELPQSSSKAIVEQSELLEREKLMQFLLGLNISYSSLCSQILLLSPSPTLDEAYSLIIQEQRSRKMGKKNSN
BLAST of ClCG03G004440 vs. Swiss-Prot
Match: AGA1_YEAST (A-agglutinin anchorage subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGA1 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.3e-08 Identity = 50/209 (23.92%), Postives = 95/209 (45.45%), Query Frame = 1
HSP 2 Score: 47.0 bits (110), Expect = 4.2e-04 Identity = 42/202 (20.79%), Postives = 86/202 (42.57%), Query Frame = 1
BLAST of ClCG03G004440 vs. Swiss-Prot
Match: MUC5A_HUMAN (Mucin-5AC OS=Homo sapiens GN=MUC5AC PE=1 SV=4) HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06 Identity = 44/183 (24.04%), Postives = 77/183 (42.08%), Query Frame = 1
HSP 2 Score: 52.0 bits (123), Expect = 1.3e-05 Identity = 44/167 (26.35%), Postives = 70/167 (41.92%), Query Frame = 1
HSP 3 Score: 51.2 bits (121), Expect = 2.2e-05 Identity = 51/196 (26.02%), Postives = 73/196 (37.24%), Query Frame = 1
HSP 4 Score: 51.2 bits (121), Expect = 2.2e-05 Identity = 44/189 (23.28%), Postives = 78/189 (41.27%), Query Frame = 1
HSP 5 Score: 50.1 bits (118), Expect = 5.0e-05 Identity = 52/240 (21.67%), Postives = 92/240 (38.33%), Query Frame = 1
HSP 6 Score: 48.5 bits (114), Expect = 1.4e-04 Identity = 49/195 (25.13%), Postives = 83/195 (42.56%), Query Frame = 1
HSP 7 Score: 47.8 bits (112), Expect = 2.5e-04 Identity = 45/182 (24.73%), Postives = 73/182 (40.11%), Query Frame = 1
HSP 8 Score: 46.6 bits (109), Expect = 5.5e-04 Identity = 55/226 (24.34%), Postives = 88/226 (38.94%), Query Frame = 1
HSP 9 Score: 45.8 bits (107), Expect = 9.4e-04 Identity = 42/182 (23.08%), Postives = 75/182 (41.21%), Query Frame = 1
HSP 10 Score: 45.4 bits (106), Expect = 1.2e-03 Identity = 48/193 (24.87%), Postives = 77/193 (39.90%), Query Frame = 1
HSP 11 Score: 44.3 bits (103), Expect = 2.7e-03 Identity = 45/195 (23.08%), Postives = 74/195 (37.95%), Query Frame = 1
HSP 12 Score: 43.1 bits (100), Expect = 6.1e-03 Identity = 31/108 (28.70%), Postives = 51/108 (47.22%), Query Frame = 1
HSP 13 Score: 42.0 bits (97), Expect = 1.4e-02 Identity = 38/131 (29.01%), Postives = 58/131 (44.27%), Query Frame = 1
HSP 14 Score: 42.0 bits (97), Expect = 1.4e-02 Identity = 45/184 (24.46%), Postives = 74/184 (40.22%), Query Frame = 1
HSP 15 Score: 41.2 bits (95), Expect = 2.3e-02 Identity = 44/172 (25.58%), Postives = 69/172 (40.12%), Query Frame = 1
HSP 16 Score: 40.4 bits (93), Expect = 3.9e-02 Identity = 42/167 (25.15%), Postives = 69/167 (41.32%), Query Frame = 1
HSP 17 Score: 40.0 bits (92), Expect = 5.2e-02 Identity = 43/182 (23.63%), Postives = 67/182 (36.81%), Query Frame = 1
HSP 18 Score: 40.0 bits (92), Expect = 5.2e-02 Identity = 37/139 (26.62%), Postives = 59/139 (42.45%), Query Frame = 1
HSP 19 Score: 38.9 bits (89), Expect = 1.1e-01 Identity = 44/190 (23.16%), Postives = 75/190 (39.47%), Query Frame = 1
HSP 20 Score: 38.5 bits (88), Expect = 1.5e-01 Identity = 37/135 (27.41%), Postives = 55/135 (40.74%), Query Frame = 1
HSP 21 Score: 38.5 bits (88), Expect = 1.5e-01 Identity = 46/196 (23.47%), Postives = 74/196 (37.76%), Query Frame = 1
HSP 22 Score: 38.1 bits (87), Expect = 2.0e-01 Identity = 41/158 (25.95%), Postives = 65/158 (41.14%), Query Frame = 1
HSP 23 Score: 37.7 bits (86), Expect = 2.6e-01 Identity = 38/134 (28.36%), Postives = 57/134 (42.54%), Query Frame = 1
HSP 24 Score: 37.4 bits (85), Expect = 3.3e-01 Identity = 48/201 (23.88%), Postives = 72/201 (35.82%), Query Frame = 1
HSP 25 Score: 34.3 bits (77), Expect = 2.8e+00 Identity = 38/135 (28.15%), Postives = 52/135 (38.52%), Query Frame = 1
BLAST of ClCG03G004440 vs. Swiss-Prot
Match: YL61_SCHPO (Putative GPI-anchored protein PB15E9.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB15E9.01c PE=2 SV=3) HSP 1 Score: 53.5 bits (127), Expect = 4.5e-06 Identity = 41/167 (24.55%), Postives = 67/167 (40.12%), Query Frame = 1
HSP 2 Score: 42.4 bits (98), Expect = 1.0e-02 Identity = 35/135 (25.93%), Postives = 62/135 (45.93%), Query Frame = 1
HSP 3 Score: 40.8 bits (94), Expect = 3.0e-02 Identity = 48/186 (25.81%), Postives = 82/186 (44.09%), Query Frame = 1
HSP 4 Score: 40.4 bits (93), Expect = 3.9e-02 Identity = 47/203 (23.15%), Postives = 84/203 (41.38%), Query Frame = 1
HSP 5 Score: 38.9 bits (89), Expect = 1.1e-01 Identity = 37/160 (23.12%), Postives = 68/160 (42.50%), Query Frame = 1
BLAST of ClCG03G004440 vs. Swiss-Prot
Match: VIT2_CHICK (Vitellogenin-2 OS=Gallus gallus GN=VTG2 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.9e-06 Identity = 46/198 (23.23%), Postives = 91/198 (45.96%), Query Frame = 1
BLAST of ClCG03G004440 vs. TrEMBL
Match: A0A0A0LRX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059720 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.0e-49 Identity = 130/239 (54.39%), Postives = 167/239 (69.87%), Query Frame = 1
BLAST of ClCG03G004440 vs. TrEMBL
Match: A0A0A0LU31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058670 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.7e-26 Identity = 103/323 (31.89%), Postives = 160/323 (49.54%), Query Frame = 1
BLAST of ClCG03G004440 vs. TrEMBL
Match: A0A0A0LRE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058680 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 96/301 (31.89%), Postives = 151/301 (50.17%), Query Frame = 1
BLAST of ClCG03G004440 vs. TrEMBL
Match: A5BNR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035665 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 51/140 (36.43%), Postives = 85/140 (60.71%), Query Frame = 1
BLAST of ClCG03G004440 vs. TrEMBL
Match: A5ALL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001215 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.7e-12 Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 1
BLAST of ClCG03G004440 vs. NCBI nr
Match: gi|778658349|ref|XP_011652556.1| (PREDICTED: uncharacterized protein LOC105435030 [Cucumis sativus]) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 130/239 (54.39%), Postives = 167/239 (69.87%), Query Frame = 1
BLAST of ClCG03G004440 vs. NCBI nr
Match: gi|700209397|gb|KGN64493.1| (hypothetical protein Csa_1G059720 [Cucumis sativus]) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 130/239 (54.39%), Postives = 167/239 (69.87%), Query Frame = 1
BLAST of ClCG03G004440 vs. NCBI nr
Match: gi|449474397|ref|XP_004154160.1| (PREDICTED: uncharacterized protein LOC101211799 [Cucumis sativus]) HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47 Identity = 131/241 (54.36%), Postives = 166/241 (68.88%), Query Frame = 1
BLAST of ClCG03G004440 vs. NCBI nr
Match: gi|645229320|ref|XP_008221412.1| (PREDICTED: uncharacterized protein LOC103321395 [Prunus mume]) HSP 1 Score: 90.1 bits (222), Expect = 6.9e-15 Identity = 50/135 (37.04%), Postives = 88/135 (65.19%), Query Frame = 1
BLAST of ClCG03G004440 vs. NCBI nr
Match: gi|645280589|ref|XP_008245251.1| (PREDICTED: uncharacterized protein LOC103343367 [Prunus mume]) HSP 1 Score: 87.4 bits (215), Expect = 4.5e-14 Identity = 69/237 (29.11%), Postives = 127/237 (53.59%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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