ClCG01G002510 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTGATCTGTTCATTCATGGCGATTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCTCTTCCGATGTGGTTTTCCCTTCTGATGCAGACCTTCAATTCTTCTCCGATCCTTATTCCCCAAATTTCTCAGATTCTGCCATTGATATTCTTACTTCTATTCCTTCTCAAGAAAACCCACTCCTCGATGAATTCAATTCAAATTCCATCGACCATTTCATTCCGATGCAGGGCTTATCTCTCTCTCATCCCACCGATTTCCATCTCCTCCCTCATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAACCTCTCCAATTTCGATGTCAAAAGCGAAGATTCCCATCTGGGTTTCACCTCAAATTCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTCTGAAAATGCTGCTGCCACCACCGTCGTCGTCGACAAATCCCTGCTCCTCCACAGAAGCTTCAGTGAAAAACCCAGCTTCCAATCTCGCCTCGAATCCCTTCTAATGGGATCCCAAAATTTCCCCAATAATCATCAGTCCCTCCCCTGCCCTGAATCTGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGCGATTTACAGGTTTTCATTATACTCCGTAATGCTCTGTTTTTCTTTTTCTTTAGTATTAAAGTTTGTGATTTAATTAATGTTTGAAGCAGAATTCTGGGATGGGGAGGACGACGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGGATATCGAAATACAGAGCGAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGGTTAGAATTAGAAATGAATTAAAGAAGAGATTAATAGAAAGTGTCAAGAAGATTAATGGAAGTGAGTTTATGGTTTATGATAATAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGGTATAATTTTTCTTTTAATTTTAAATTTAATTTAATTTTTTTTAGGGATTTTTTTTCGGGATATTTCCACATCAGCTGTTTTAACAGCTGAGGTGGCAACAAAGAACTGAGATTCTCTCTTTGAATTTTTCAAATTTTGCCACCTCATCTCAATTTTAGGAACTTCAGATTTAAAATTTTGGGGAAAAAATCTGATTTCTAAATTTTAAATTTTCTTAACTTTTAAAATGAAGGCTTTGAGTTAATTTTCTTTTTTCTTTTTAAATCTAAACTTTGAAATTATCGATTTTAGTTCTAGAATTTAAAAAAAAAAAAAAGATTTTTGTTAAGTTACTTTTCTACTTTAATTTTATTATTTTTTTTTTCTGTTGAATGTCACTAATTTTATTTAGCATACTAAAATTCAGAATACACAATTATAGCCTAGCCAAGTCATTAATTTATTGAAATTAAAAATATCAAAATAGTTACTTTTAAATTGATAAAAAAAATTTATTATTATTTTTTACAAAAATGAAGTAACTAAAATAGACATTTTAAAAACTTGAGCACCAACATGCAAACAAACTCAAAAAGTTAGAATTCCAATTAAAATAGACATTTTGAAAGTTCAAATTCAAAGCCAAAGTAAGATTTAAACTTAAAAACCATTTTGCCATATTTCCATCCTTAACTAAAGTGATTAGCTATAATAATATCTTCCTTCGAGTTGATACGAATTTTCAAGAAAAATTATTATTTTTTAATGCAAACGAAAAATTTTTAGTTGGAAATACAAAATTCGTTTCACATTTTTTTTTTTTTTTTTTTTTGTGTTCTTTCGAAAATTCCATATTTATTTATTTCCTTTTGAATGCAGATTGAAGGGTTGCATGCAGGGGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGATCTTAACTTGAAGAAGAAGGAGGAAAAGAAAATGATGATGAAGAAAAAATATTATTTATTTTTTCCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTGTGTTCTTTCGAAAATTACATATTTATTTATTTACTTTTGAATGCAGATTGAAGGGTTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGA ATGTCTTCTGATCTGTTCATTCATGGCGATTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCTCTTCCGATGTGGTTTTCCCTTCTGATGCAGACCTTCAATTCTTCTCCGATCCTTATTCCCCAAATTTCTCAGATTCTGCCATTGATATTCTTACTTCTATTCCTTCTCAAGAAAACCCACTCCTCGATGAATTCAATTCAAATTCCATCGACCATTTCATTCCGATGCAGGGCTTATCTCTCTCTCATCCCACCGATTTCCATCTCCTCCCTCATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAACCTCTCCAATTTCGATGTCAAAAGCGAAGATTCCCATCTGGGTTTCACCTCAAATTCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTCTGAAAATGCTGCTGCCACCACCGTCGTCGTCGACAAATCCCTGCTCCTCCACAGAAGCTTCAGTGAAAAACCCAGCTTCCAATCTCGCCTCGAATCCCTTCTAATGGGATCCCAAAATTTCCCCAATAATCATCAGTCCCTCCCCTGCCCTGAATCTGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGCGATTTACAGAATTCTGGGATGGGGAGGACGACGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGGATATCGAAATACAGAGCGAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGATTGAAGGGTTGCATGCAGGGGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGA ATGTCTTCTGATCTGTTCATTCATGGCGATTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCTCTTCCGATGTGGTTTTCCCTTCTGATGCAGACCTTCAATTCTTCTCCGATCCTTATTCCCCAAATTTCTCAGATTCTGCCATTGATATTCTTACTTCTATTCCTTCTCAAGAAAACCCACTCCTCGATGAATTCAATTCAAATTCCATCGACCATTTCATTCCGATGCAGGGCTTATCTCTCTCTCATCCCACCGATTTCCATCTCCTCCCTCATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAACCTCTCCAATTTCGATGTCAAAAGCGAAGATTCCCATCTGGGTTTCACCTCAAATTCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTCTGAAAATGCTGCTGCCACCACCGTCGTCGTCGACAAATCCCTGCTCCTCCACAGAAGCTTCAGTGAAAAACCCAGCTTCCAATCTCGCCTCGAATCCCTTCTAATGGGATCCCAAAATTTCCCCAATAATCATCAGTCCCTCCCCTGCCCTGAATCTGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGCGATTTACAGAATTCTGGGATGGGGAGGACGACGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGGATATCGAAATACAGAGCGAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGATTGAAGGGTTGCATGCAGGGGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGA MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQENPLLDEFNSNSIDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNFDVKSEDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGKQYGEEEGTMRGKQYGEVYGRMQFHYCGF
BLAST of ClCG01G002510 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 9.5e-08 Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 1
BLAST of ClCG01G002510 vs. Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07 Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 1
BLAST of ClCG01G002510 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 1
BLAST of ClCG01G002510 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07 Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 1
BLAST of ClCG01G002510 vs. Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 8.0e-07 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1
BLAST of ClCG01G002510 vs. TrEMBL
Match: A0A0A0KNV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152920 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 9.2e-111 Identity = 211/267 (79.03%), Postives = 222/267 (83.15%), Query Frame = 1
BLAST of ClCG01G002510 vs. TrEMBL
Match: B9GWU0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13050g PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 4.8e-67 Identity = 164/343 (47.81%), Postives = 208/343 (60.64%), Query Frame = 1
BLAST of ClCG01G002510 vs. TrEMBL
Match: M5WRR8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017365mg PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 8.5e-64 Identity = 175/365 (47.95%), Postives = 216/365 (59.18%), Query Frame = 1
BLAST of ClCG01G002510 vs. TrEMBL
Match: B9RCF2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1687540 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 6.1e-62 Identity = 166/369 (44.99%), Postives = 210/369 (56.91%), Query Frame = 1
BLAST of ClCG01G002510 vs. TrEMBL
Match: A0A067JN38_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20562 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 6.1e-62 Identity = 157/337 (46.59%), Postives = 195/337 (57.86%), Query Frame = 1
BLAST of ClCG01G002510 vs. TAIR10
Match: AT5G41380.1 (AT5G41380.1 CCT motif family protein) HSP 1 Score: 183.3 bits (464), Expect = 2.4e-46 Identity = 140/319 (43.89%), Postives = 172/319 (53.92%), Query Frame = 1
BLAST of ClCG01G002510 vs. TAIR10
Match: AT1G63820.1 (AT1G63820.1 CCT motif family protein) HSP 1 Score: 162.9 bits (411), Expect = 3.4e-40 Identity = 106/253 (41.90%), Postives = 135/253 (53.36%), Query Frame = 1
BLAST of ClCG01G002510 vs. TAIR10
Match: AT1G04500.1 (AT1G04500.1 CCT motif family protein) HSP 1 Score: 105.5 bits (262), Expect = 6.5e-23 Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 1
BLAST of ClCG01G002510 vs. TAIR10
Match: AT5G59990.1 (AT5G59990.1 CCT motif family protein) HSP 1 Score: 102.8 bits (255), Expect = 4.2e-22 Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1
BLAST of ClCG01G002510 vs. TAIR10
Match: AT2G33350.1 (AT2G33350.1 CCT motif family protein) HSP 1 Score: 99.8 bits (247), Expect = 3.6e-21 Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 1
BLAST of ClCG01G002510 vs. NCBI nr
Match: gi|778699549|ref|XP_011654732.1| (PREDICTED: two-component response regulator-like APRR5 isoform X2 [Cucumis sativus]) HSP 1 Score: 540.0 bits (1390), Expect = 2.9e-150 Identity = 282/350 (80.57%), Postives = 297/350 (84.86%), Query Frame = 1
BLAST of ClCG01G002510 vs. NCBI nr
Match: gi|659073898|ref|XP_008437312.1| (PREDICTED: uncharacterized protein LOC103482769 isoform X2 [Cucumis melo]) HSP 1 Score: 536.6 bits (1381), Expect = 3.2e-149 Identity = 283/349 (81.09%), Postives = 294/349 (84.24%), Query Frame = 1
BLAST of ClCG01G002510 vs. NCBI nr
Match: gi|449452462|ref|XP_004143978.1| (PREDICTED: two-component response regulator-like APRR5 isoform X1 [Cucumis sativus]) HSP 1 Score: 535.4 bits (1378), Expect = 7.2e-149 Identity = 282/351 (80.34%), Postives = 297/351 (84.62%), Query Frame = 1
BLAST of ClCG01G002510 vs. NCBI nr
Match: gi|659073896|ref|XP_008437311.1| (PREDICTED: uncharacterized protein LOC103482769 isoform X1 [Cucumis melo]) HSP 1 Score: 531.9 bits (1369), Expect = 7.9e-148 Identity = 283/350 (80.86%), Postives = 294/350 (84.00%), Query Frame = 1
BLAST of ClCG01G002510 vs. NCBI nr
Match: gi|700194900|gb|KGN50077.1| (hypothetical protein Csa_5G152920 [Cucumis sativus]) HSP 1 Score: 408.3 bits (1048), Expect = 1.3e-110 Identity = 211/267 (79.03%), Postives = 222/267 (83.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|