Csa6G507410 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G507410
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionF-box family protein; contains IPR005174 (Protein of unknown function DUF295)
LocationChr6 : 26044137 .. 26045217 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCGCTGTTTGCCGATCACTACGTGCTTCTTTCCCTCCTTTCAACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACCACCTCGACGTCGATCATCCAGTCAAACACATTTTTCTCGCTCGAAAGATTGTTTATCGCTTCGGTCCTCTTGATCATCATTTTTCTGCAGCAGAGGGGGCGAAGATTTGGTTTGCGATGGCCGACAGTGCAAAGGAAGGTATATTGCGATTTCTGCGTCCGTTATACCTCTCTAATTTTAAATTCACTTTTGAAGCTCTTCCACATGAAATCAATTCACTGGAATTTCGTATTCGTGAATTGGCTAAATTGTATATGCTTGTAAATACGGAAGGTGTTTGTGTTTCTGAAATTAGAAAGGTCGTAATGTTCCCTGATTCTCCCTGGATCGATACGAAGAATTGCATCGTTTTTGCTATTTTTGTAGATGGAAAATTGGGGTTCACGAAACTTACGGATGAGAAATGGACGATGATTGAGAAACATAATTTTGCCCGCGGTGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAGAAGAGGAGAAGTTTTCTCGGTTGATTCATCGTCGATGGAATTATCACAAATTTCTCTTCCGATGAGTGGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATATGGTAGATCGATTAGATGATTTCAGTGACAGTGATGATGATGGTGGTGGAGGTTATAATTATGATGATGATGAGATTGATGGTGGTGGTGGAGGTTATAATTATGATTATGATGATGATGATGATGATGAGAGCGATAGCAGTGAGAGCGATGAAGATGAAGATGAAGAAGATGAAGAAGAAGCTAATTTCAAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGTAGAGAATTGGAGGAGGTGAAGAATTTGGGGAATGATGCGATTGTTTTGGGGAATAAGAGGGAAGGTAGTTTCTCAATTTCGGGTACAGAATTTGAAGGAATTGAAAGGAATTGCATATATTATCCTCGAAGAAAAATGATGATGAAGAATGAATTCTGA

mRNA sequence

ATGTCGCGCTGTTTGCCGATCACTACGTGCTTCTTTCCCTCCTTTCAACGCCCAGAGGGGGCGAAGATTTGGTTTGCGATGGCCGACAGTGCAAAGGAAGGTATATTGCGATTTCTGCGTCCGTTATACCTCTCTAATTTTAAATTCACTTTTGAAGCTCTTCCACATGAAATCAATTCACTGGAATTTCGTATTCGTGAATTGGCTAAATTGTATATGCTTGTAAATACGGAAGGTGTTTGTGTTTCTGAAATTAGAAAGGTCGTAATGTTCCCTGATTCTCCCTGGATCGATACGAAGAATTGCATCGTTTTTGCTATTTTTGTAGATGGAAAATTGGGGTTCACGAAACTTACGGATGAGAAATGGACGATGATTGAGAAACATAATTTTGCCCGCGGTGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAGAAGAGGAGAAGTTTTCTCGGTTGATTCATCGTCGATGGAATTATCACAAATTTCTCTTCCGATGAGTGGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGAGGTGAAGAATTTGGGGAATGATGCGATTGTTTTGGGGAATAAGAGGGAAGGTAGTTTCTCAATTTCGGGTACAGAATTTGAAGGAATTGAAAGGAATTGCATATATTATCCTCGAAGAAAAATGATGATGAAGAATGAATTCTGA

Coding sequence (CDS)

ATGTCGCGCTGTTTGCCGATCACTACGTGCTTCTTTCCCTCCTTTCAACGCCCAGAGGGGGCGAAGATTTGGTTTGCGATGGCCGACAGTGCAAAGGAAGGTATATTGCGATTTCTGCGTCCGTTATACCTCTCTAATTTTAAATTCACTTTTGAAGCTCTTCCACATGAAATCAATTCACTGGAATTTCGTATTCGTGAATTGGCTAAATTGTATATGCTTGTAAATACGGAAGGTGTTTGTGTTTCTGAAATTAGAAAGGTCGTAATGTTCCCTGATTCTCCCTGGATCGATACGAAGAATTGCATCGTTTTTGCTATTTTTGTAGATGGAAAATTGGGGTTCACGAAACTTACGGATGAGAAATGGACGATGATTGAGAAACATAATTTTGCCCGCGGTGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAGAAGAGGAGAAGTTTTCTCGGTTGATTCATCGTCGATGGAATTATCACAAATTTCTCTTCCGATGAGTGGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGAGGTGAAGAATTTGGGGAATGATGCGATTGTTTTGGGGAATAAGAGGGAAGGTAGTTTCTCAATTTCGGGTACAGAATTTGAAGGAATTGAAAGGAATTGCATATATTATCCTCGAAGAAAAATGATGATGAAGAATGAATTCTGA

Protein sequence

MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF*
Homology
[Close]
BLAST of Csa6G507410 vs. Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 1 

Query: 52  EALPHEINSLEFRIRELAKLYML--VNTEGVCVSEI---RKVVMFPDSPWIDTKNCIVFA 111
           E  P  ++  +F++REL + + L   NT G  V  +   + VV + D    D K  ++  
Sbjct: 121 ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDG-DYK-FVLLT 180

Query: 112 IFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQIS 171
           I V GKL   +  D  WT+I        DV+++ G+F+AVD  G    VD SS++L+ ++
Sbjct: 181 IHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVA 240

Query: 172 LPMSGFGKQKHLVECGGE 185
            P+ G G +K L+E  GE
Sbjct: 241 SPVFG-GDKKFLIESCGE 255

[Close]
BLAST of Csa6G507410 vs. TrEMBL
Match: A0A0A0KHE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507410 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 4.2e-131
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINS 60
           MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINS
Sbjct: 1   MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINS 60

Query: 61  LEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTD 120
           LEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTD
Sbjct: 61  LEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTD 120

Query: 121 EKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE 180
           EKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE
Sbjct: 121 EKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE 180

Query: 181 CGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF 233
           CGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF
Sbjct: 181 CGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF 232

[Close]
BLAST of Csa6G507410 vs. TrEMBL
Match: A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.8e-40
Identity = 93/171 (54.39%), Postives = 110/171 (64.33%), Query Frame = 1 

Query: 14  SFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYM 73
           SF  P  A+ W A  +S K G +RFL PL     K   + L  E+N L+F I E+AK Y 
Sbjct: 105 SFSCP--AEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYT 164

Query: 74  LVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFAR 133
           L  T G  V  I KVVMFPDSPWID K C + AI+  GKLGF K  D KWT+I+  NF  
Sbjct: 165 LGYTNGSLVPRITKVVMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHY 224

Query: 134 GDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
            DVIVY+G+FYAVDR G +F +D SSM+L Q S P+ GFG QKHLVEC GE
Sbjct: 225 DDVIVYKGQFYAVDRWGTIFWID-SSMKLVQFSPPLCGFGNQKHLVECNGE 272

[Close]
BLAST of Csa6G507410 vs. TrEMBL
Match: A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-14
Identity = 78/259 (30.12%), Postives = 110/259 (42.47%), Query Frame = 1 

Query: 14  SFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYM 73
           SF  P  A+ W A  +S K G +RFL PL     K   + L  E+N L+F I E+AK Y 
Sbjct: 105 SFSCP--AEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYT 164

Query: 74  LVNTEGVCVSEIRKVVMFPDSPWIDTKNC------------------------------- 133
           L  T G  V  I KVVMFPDSPWID K C                               
Sbjct: 165 LGYTNGSLVPRITKVVMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHY 224

Query: 134 ---IVFA--IFVDGKLGFTKLTDEKWTMIEKHNFARG-----DVIVYRGKFYAVDR---- 193
              IV+    +   + G     D    +++      G      ++   G+ Y VDR    
Sbjct: 225 DDVIVYKGQFYAVDRWGTIFWIDSSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDK 284

Query: 194 -----RGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGG-EEVKNLGNDAIVLGNKREG 222
                  ++F +   +  +   S  +  F   +   E G   EVKNLGN++ VLGN  + 
Sbjct: 285 EPLLWNADIFHIHWLNNLIEDSSPKVIDFKLHRLDQEWGRWVEVKNLGNESFVLGN--DC 344


HSP 2 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 1 

Query: 24  WFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGVCVS 83
           W A  ++   G LRFL PL     K   +    E+N L+FRI E+AK Y+L +T G  + 
Sbjct: 103 WLAKVETTNLGKLRFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIGGILF 162

Query: 84  EIRKVVMFPDSPWIDTKNC-IVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGK 143
            I KVV+FPDS WID K   I+ A+ ++GKLG+TK+ D KWT+I   NF   D+IVY G+
Sbjct: 163 -INKVVVFPDSAWIDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGE 222

Query: 144 FYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
            Y VDR G VF +D SSM+L QIS  +     +KHL+ECGGE
Sbjct: 223 IYTVDRLGTVFLID-SSMKLVQISPELGVISNEKHLIECGGE 262

[Close]
BLAST of Csa6G507410 vs. TrEMBL
Match: A0A0A0KGT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-01
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 1 

Query: 185 EVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYY 222
           EVKNLGN A V+G+    SFS+S  +FEG + NCIY+
Sbjct: 310 EVKNLGNRAFVVGHN---SFSVSAADFEGFKENCIYF 343


HSP 2 Score: 135.6 bits (340), Expect = 7.9e-29
Identity = 75/159 (47.17%), Postives = 95/159 (59.75%), Query Frame = 1 

Query: 29  DSAKEGILRFLRPLYLSNFKFTFEALP---HEINSLEFRIRELAKLYMLVNTEGVCVSEI 88
           + ++ G +RFL PL         E      +E N L  RI ELA  Y L  T+  CV  I
Sbjct: 133 EKSELGKMRFLHPLSKKIIPRNLEDPSEGHNEFNLLHLRIHELAVSYSLKYTDTTCVPGI 192

Query: 89  RKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYA 148
            K+V+FP+S   D K+C + A+F  GKLGF +  DEKWT+I++ NF   DVIVY  ++Y 
Sbjct: 193 SKIVLFPNSSGSDVKDCTIIAVFEGGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYT 252

Query: 149 VDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
           VDR G VF +D  SM L Q S P+ G G QKHLVECGGE
Sbjct: 253 VDRWGTVFWID-LSMRLVQFSPPLIGLGHQKHLVECGGE 290

[Close]
BLAST of Csa6G507410 vs. TrEMBL
Match: A0A0A0KLM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-01
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 1 

Query: 185 EVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYY 222
           E+KNL N +I+LGN  +  FSI  +EFEG ++NC+YY
Sbjct: 355 ELKNLRNQSIILGN--DCCFSIEASEFEGCKKNCVYY 389


HSP 2 Score: 129.8 bits (325), Expect = 4.3e-27
Identity = 81/239 (33.89%), Postives = 117/239 (48.95%), Query Frame = 1 

Query: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80
           +K W      +K      L P+          + P   N L++R+ EL K Y +      
Sbjct: 92  SKGWLIKVQESKNQSFTLLSPISDKILYPHGTSSPMLWNLLDYRVIELCKSYTIHRQLSA 151

Query: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140
            VS   KVV FP+SPW+D ++ +   IF++GKLG  K  DEKW++++  NF   DVIV++
Sbjct: 152 FVS---KVVFFPNSPWVDVEDSVACCIFLEGKLGIMKHGDEKWSLLDDENFFYDDVIVFK 211

Query: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE-CGG---------------- 200
            +FY  D+ G +  VD+SS++L Q S P+ GFG +KHLVE CG                 
Sbjct: 212 SQFYVTDKWGTISWVDTSSLKLVQFSPPLCGFGNKKHLVESCGSLYVVDRFYEKPPRRRN 271

Query: 201 ---------------------EEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYY 222
                                 +VKNLG+ A VLG  +  SFS+S  +  G + NCIY+
Sbjct: 272 YGDVAVVCFKVYKLDEEWGTWVDVKNLGDRAFVLG--KSCSFSVSAKDITGYQENCIYF 325

[Close]
BLAST of Csa6G507410 vs. TAIR10
Match: AT2G17030.1 (AT2G17030.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11
Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 1 

Query: 52  EALPHEINSLEFRIRELAKLYML--VNTEGVCVSEI---RKVVMFPDSPWIDTKNCIVFA 111
           E  P  ++  +F++REL + + L   NT G  V  +   + VV + D    D K  ++  
Sbjct: 121 ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDG-DYK-FVLLT 180

Query: 112 IFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQIS 171
           I V GKL   +  D  WT+I        DV+++ G+F+AVD  G    VD SS++L+ ++
Sbjct: 181 IHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVA 240

Query: 172 LPMSGFGKQKHLVECGGE 185
            P+ G G +K L+E  GE
Sbjct: 241 SPVFG-GDKKFLIESCGE 255

[Close]
BLAST of Csa6G507410 vs. NCBI nr
Match: gi|700193764|gb|KGN48968.1| (hypothetical protein Csa_6G507410 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 6.0e-131
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINS 60
           MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINS
Sbjct: 1   MSRCLPITTCFFPSFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINS 60

Query: 61  LEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTD 120
           LEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTD
Sbjct: 61  LEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTD 120

Query: 121 EKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE 180
           EKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE
Sbjct: 121 EKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVE 180

Query: 181 CGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF 233
           CGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF
Sbjct: 181 CGGEEVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYYPRRKMMMKNEF 232

[Close]
BLAST of Csa6G507410 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 5.9e-70
Identity = 135/149 (90.60%), Postives = 136/149 (91.28%), Query Frame = 1 

Query: 36  LRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSP 95
           LRFLRPLYLSN KFTF  LPHEIN LEFRI ELAKLYMLVNTEGVCVSEI KVV FPDS 
Sbjct: 432 LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 491

Query: 96  WIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSV 155
           WIDTKNCI FAIFVDGKL FTKLTDEKWTMIEKHNFA GDVI Y GKFYAVDRRG+VFSV
Sbjct: 492 WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 551

Query: 156 DSSSMELSQISLPMSGFGKQKHLVECGGE 185
           DSSSMELSQISLPMSGFGKQKHLVECGGE
Sbjct: 552 DSSSMELSQISLPMSGFGKQKHLVECGGE 580

[Close]
BLAST of Csa6G507410 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-39
Identity = 89/164 (54.27%), Postives = 106/164 (64.63%), Query Frame = 1 

Query: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80
           A+ W A  +S K G +RFL PL     K   +    E+N L+F I E+AK Y L  T G 
Sbjct: 107 AEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYEVAKSYTLGYTNGS 166

Query: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140
            V  I KVVMFPDSPWID K C + A++  GKLGF K  D+KWT+I+  NF   DVIVY+
Sbjct: 167 PVPRITKVVMFPDSPWIDVKKCTILAVYAGGKLGFAKHGDDKWTLIDHRNFHYDDVIVYK 226

Query: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
           G+FYAVDR G VF +D SSM L Q S P+ GFG QKHLVEC GE
Sbjct: 227 GQFYAVDRWGTVFWID-SSMRLVQFSPPLCGFGNQKHLVECNGE 269


HSP 2 Score: 42.0 bits (97), Expect = 1.7e+00
Identity = 19/37 (51.35%), Postives = 27/37 (72.97%), Query Frame = 1 

Query: 185 EVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYY 222
           EVKNLGN + +LGN  +  FS+S   FEG++ +CIY+
Sbjct: 322 EVKNLGNQSFILGN--DCCFSVSTPNFEGLKGSCIYF 356


HSP 3 Score: 172.6 bits (436), Expect = 8.3e-40
Identity = 93/171 (54.39%), Postives = 110/171 (64.33%), Query Frame = 1 

Query: 14  SFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYM 73
           SF  P  A+ W A  +S K G +RFL PL     K   + L  E+N L+F I E+AK Y 
Sbjct: 105 SFSCP--AEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYT 164

Query: 74  LVNTEGVCVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFAR 133
           L  T G  V  I KVVMFPDSPWID K C + AI+  GKLGF K  D KWT+I+  NF  
Sbjct: 165 LGYTNGSLVPRITKVVMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHY 224

Query: 134 GDVIVYRGKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
            DVIVY+G+FYAVDR G +F +D SSM+L Q S P+ GFG QKHLVEC GE
Sbjct: 225 DDVIVYKGQFYAVDRWGTIFWID-SSMKLVQFSPPLCGFGNQKHLVECNGE 272

[Close]
BLAST of Csa6G507410 vs. NCBI nr
Match: gi|778719846|ref|XP_004134837.2| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 3.5e-14
Identity = 78/259 (30.12%), Postives = 110/259 (42.47%), Query Frame = 1 

Query: 14  SFQRPEGAKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYM 73
           SF  P  A+ W A  +S K G +RFL PL     K   + L  E+N L+F I E+AK Y 
Sbjct: 105 SFSCP--AEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYT 164

Query: 74  LVNTEGVCVSEIRKVVMFPDSPWIDTKNC------------------------------- 133
           L  T G  V  I KVVMFPDSPWID K C                               
Sbjct: 165 LGYTNGSLVPRITKVVMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHY 224

Query: 134 ---IVFA--IFVDGKLGFTKLTDEKWTMIEKHNFARG-----DVIVYRGKFYAVDR---- 193
              IV+    +   + G     D    +++      G      ++   G+ Y VDR    
Sbjct: 225 DDVIVYKGQFYAVDRWGTIFWIDSSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDK 284

Query: 194 -----RGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGG-EEVKNLGNDAIVLGNKREG 222
                  ++F +   +  +   S  +  F   +   E G   EVKNLGN++ VLGN  + 
Sbjct: 285 EPLLWNADIFHIHWLNNLIEDSSPKVIDFKLHRLDQEWGRWVEVKNLGNESFVLGN--DC 344


HSP 2 Score: 141.7 bits (356), Expect = 1.6e-30
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 1 

Query: 24  WFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGVCVS 83
           W A  ++   G LRFL PL     K   +    E+N L+FRI E+AK Y+L +T G  + 
Sbjct: 103 WLAKVETTNLGKLRFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIGGILF 162

Query: 84  EIRKVVMFPDSPWIDTKNC-IVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGK 143
            I KVV+FPDS WID K   I+ A+ ++GKLG+TK+ D KWT+I   NF   D+IVY G+
Sbjct: 163 -INKVVVFPDSAWIDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGE 222

Query: 144 FYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
            Y VDR G VF +D SSM+L QIS  +     +KHL+ECGGE
Sbjct: 223 IYTVDRLGTVFLID-SSMKLVQISPELGVISNEKHLIECGGE 262

[Close]
BLAST of Csa6G507410 vs. NCBI nr
Match: gi|449434450|ref|XP_004135009.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 45.4 bits (106), Expect = 1.5e-01
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 1 

Query: 185 EVKNLGNDAIVLGNKREGSFSISGTEFEGIERNCIYY 222
           EVKNLGN A V+G+    SFS+S  +FEG + NCIY+
Sbjct: 310 EVKNLGNRAFVVGHN---SFSVSAADFEGFKENCIYF 343


HSP 2 Score: 137.1 bits (344), Expect = 3.9e-29
Identity = 74/159 (46.54%), Postives = 99/159 (62.26%), Query Frame = 1 

Query: 29  DSAKEGILRFLRPLYLSNFKFTFEALP---HEINSLEFRIRELAKLYMLVNTEGVCVSEI 88
           + ++ G +RFL PL     +   E L    +E+N L+ R+ ELA  Y L  ++  CV  I
Sbjct: 108 EKSELGKMRFLHPLSKQIIRCNLEDLSQGHNELNLLDLRMDELAVSYSLKYSDTTCVPGI 167

Query: 89  RKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYA 148
            K+V+FP+S   D K+C + A+F  GKLGF +  DEKWT+I++ NF   DVIVY  ++Y 
Sbjct: 168 SKIVVFPNSSGSDVKDCTIIAVFECGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYT 227

Query: 149 VDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 185
           VDR G VF +D SSM L Q S P+ G G  KHLVECGGE
Sbjct: 228 VDRWGTVFWID-SSMRLVQFSPPLIGLGHHKHLVECGGE 265

The following BLAST results are available for this feature:
BLAST of Csa6G507410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKI23_ARATH1.2e-0933.33F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1[more]
BLAST of Csa6G507410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHE7_CUCSA4.2e-131100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507410 PE=4 SV=1[more]
A0A0A0KJJ1_CUCSA5.8e-4054.39Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1[more]
A0A0A0KJJ1_CUCSA2.5e-1430.12Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1[more]
A0A0A0KGT9_CUCSA1.1e-0156.76Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1[more]
A0A0A0KLM6_CUCSA1.4e-0154.05Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1[more]
BLAST of Csa6G507410 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17030.16.6e-1133.33 F-box family protein with a domain of unknown function (DUF295)[more]
BLAST of Csa6G507410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193764|gb|KGN48968.1|6.0e-131100.00hypothetical protein Csa_6G507410 [Cucumis sativus][more]
gi|659081066|ref|XP_008441132.1|5.9e-7090.60PREDICTED: F-box protein At2g17036 [Cucumis melo][more]
gi|659081066|ref|XP_008441132.1|1.9e-3954.27PREDICTED: F-box protein At2g17036 [Cucumis melo][more]
gi|778719846|ref|XP_004134837.2|3.5e-1430.12PREDICTED: putative F-box protein At1g65770 [Cucumis sativus][more]
gi|449434450|ref|XP_004135009.1|1.5e-0156.76PREDICTED: putative F-box protein At1g65770 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005174DUF295
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G507410.1Csa6G507410.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 184..221
score: 2.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G507410Cla014330Watermelon (97103) v1cuwmB500
Csa6G507410MELO3C007952Melon (DHL92) v3.5.1cumeB503
Csa6G507410ClCG01G020690Watermelon (Charleston Gray)cuwcgB432
Csa6G507410Lsi01G005530Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G507410MELO3C007952.2Melon (DHL92) v3.6.1cumedB483
Csa6G507410Cla97C01G020190Watermelon (97103) v2cuwmbB412
Csa6G507410Bhi03G000588Wax gourdcuwgoB628
Csa6G507410CSPI06G32260Wild cucumber (PI 183967)cpicuB313
Csa6G507410Cucsa.044040Cucumber (Gy14) v1cgycuB027
Csa6G507410CmaCh07G003980Cucurbita maxima (Rimu)cmacuB877
Csa6G507410CmaCh03G006400Cucurbita maxima (Rimu)cmacuB681
Csa6G507410CmoCh07G003920Cucurbita moschata (Rifu)cmocuB865
Csa6G507410CmoCh03G006670Cucurbita moschata (Rifu)cmocuB670
Csa6G507410Cp4.1LG10g10380Cucurbita pepo (Zucchini)cpecuB085
Csa6G507410Cp4.1LG19g08480Cucurbita pepo (Zucchini)cpecuB503
Csa6G507410CsGy6G031810Cucumber (Gy14) v2cgybcuB281
Csa6G507410Carg07928Silver-seed gourdcarcuB0663
Csa6G507410Carg00550Silver-seed gourdcarcuB0441
Csa6G507410Carg16150Silver-seed gourdcarcuB0381
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G507410Cucurbita pepo (Zucchini)cpecuB228
Csa6G507410Cucurbita pepo (Zucchini)cpecuB286
Csa6G507410Bottle gourd (USVL1VR-Ls)culsiB468
Csa6G507410Cucumber (Gy14) v2cgybcuB144
Csa6G507410Melon (DHL92) v3.6.1cumedB476
Csa6G507410Watermelon (97103) v2cuwmbB420
Csa6G507410Wax gourdcuwgoB531
Csa6G507410Cucumber (Chinese Long) v2cucuB119
Csa6G507410Cucumber (Gy14) v1cgycuB462
Csa6G507410Cucurbita moschata (Rifu)cmocuB335
Csa6G507410Melon (DHL92) v3.5.1cumeB495
Csa6G507410Watermelon (Charleston Gray)cuwcgB425
Csa6G507410Watermelon (97103) v1cuwmB450