Lsi01G005530 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G005530
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	F-box protein
Location	chr01 : 4458162 .. 4459400 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACAGCAGTGTACGGTGGTCCGATCTTCCTCCCGAACTGTGGCCAATCATCGGTAAACGCCTCAATACCTACATCGACGTCCTCCGGTTTCGCAGCGTCTGCCGATCTTGGCGTGCTTCTCTTCCTCCTTTCAACGCCATTTCTCCTCTTTTACCTCTCGATCTCCCTTCTCCCATCTTCACTGCCGATCATCTCACAGACGCCTTCCTTATCCGAAGAATAATCTATCGCCTCAGTCCCCTCGATCATCGTCAAACTTCCGATTCTGCTTTTTCTTCTTCTTCTTGTGAAGCGGAGGGCTGGTTAGCGAAGGTGGAGAGTACAAAATTAGGTAAAATGCGTTTTCTGCATCCGCTTTCTACTCGCTATGCTAAATACAACAACGAGCTATTTCGTAAGGAAGTGAACTTACTGGATTTTGGAATTTACGAAGTAGCTAAATCGTATACTCTTGGTTATACTAGTGGTACTCTTGTTCCTCGAATTACTAAGGTTGTAATGTTTCCTGATTCCCCCTGGATCGATGTGAAGAACTGCACCATTTTAGCAGTTTACGCCGGTGGAAAATTAGGGTTTGCTAAACATGGAGACGACAAATGGACGCTGATTGACGACCGTAATTTTCACTACGACGATGTGATTGTGTACAAGGGGCAGTTCTATGCAGTTGATCGATGGGGAACAGTTTTCTGGATTGATTCATCGATGAAACTGGTACAGTTTTCTCCTCCATTGTGTGGTTTTGGTAATCAGAAGCATTTGGTTGAGTGTGGCGGTGAACTCTATGTTGTTGATCGATTTCTAGATAAGGAGCCACTGTTATGGAATGCAGATATTTTTCATATTCATTGGTTGAATAATCTCATTGAAGATTCCCCTCCTAAAGTAATTGATTTCAAACTTCATAGGCTGGATCAAGAGTGGGGAAGATGGGTGGAGGTAAAAAATTTGGGGAATCAATCCTTTGTTTTGGGCAATGATTGTTGTTTCTCAGTTTCAACCCCAAATTTTGAAGGACTTAAAGGGAGTTGCATATATTTTACCCATACACCAAAATGCACTCTTGGGTATAACACTTATGTATATGAGCTTGAAGACAAAAGGATTCTGAAAGCATCTATCAATGATAATGCACCAATTTTTGGGCCTCCCCCAATTTGGCTGAATTTGGAGGCCACTCAGTTTGAAGAGAATGCAGCTGATGATCTATACATCTCTGCCTGTGCCTGCTAA

mRNA sequence

ATGGAAGACAGCAGTGTACGGTGGTCCGATCTTCCTCCCGAACTGTGGCCAATCATCGGTAAACGCCTCAATACCTACATCGACGTCCTCCGGTTTCGCAGCGTCTGCCGATCTTGGCGTGCTTCTCTTCCTCCTTTCAACGCCATTTCTCCTCTTTTACCTCTCGATCTCCCTTCTCCCATCTTCACTGCCGATCATCTCACAGACGCCTTCCTTATCCGAAGAATAATCTATCGCCTCAGTCCCCTCGATCATCGTCAAACTTCCGATTCTGCTTTTTCTTCTTCTTCTTGTGAAGCGGAGGGCTGGTTAGCGAAGGTGGAGAGTACAAAATTAGGTAAAATGCGTTTTCTGCATCCGCTTTCTACTCGCTATGCTAAATACAACAACGAGCTATTTCGTAAGGAAGTGAACTTACTGGATTTTGGAATTTACGAAGTAGCTAAATCGTATACTCTTGGTTATACTAGTGGTACTCTTGTTCCTCGAATTACTAAGGTTGTAATGTTTCCTGATTCCCCCTGGATCGATGTGAAGAACTGCACCATTTTAGCAGTTTACGCCGGTGGAAAATTAGGGTTTGCTAAACATGGAGACGACAAATGGACGCTGATTGACGACCGTAATTTTCACTACGACGATGTGATTGTGTACAAGGGGCAGTTCTATGCAGTTGATCGATGGGGAACAGTTTTCTGGATTGATTCATCGATGAAACTGGTACAGTTTTCTCCTCCATTGTGTGGTTTTGGTAATCAGAAGCATTTGGTTGAGTGTGGCGGTGAACTCTATGTTGTTGATCGATTTCTAGATAAGGAGCCACTGTTATGGAATGCAGATATTTTTCATATTCATTGGTTGAATAATCTCATTGAAGATTCCCCTCCTAAAGTAATTGATTTCAAACTTCATAGGCTGGATCAAGAGTGGGGAAGATGGGTGGAGGTAAAAAATTTGGGGAATCAATCCTTTGTTTTGGGCAATGATTGTTGTTTCTCAGTTTCAACCCCAAATTTTGAAGGACTTAAAGGGAGTTGCATATATTTTACCCATACACCAAAATGCACTCTTGGGTATAACACTTATGTATATGAGCTTGAAGACAAAAGGATTCTGAAAGCATCTATCAATGATAATGCACCAATTTTTGGGCCTCCCCCAATTTGGCTGAATTTGGAGGCCACTCAGTTTGAAGAGAATGCAGCTGATGATCTATACATCTCTGCCTGTGCCTGCTAA

Coding sequence (CDS)

ATGGAAGACAGCAGTGTACGGTGGTCCGATCTTCCTCCCGAACTGTGGCCAATCATCGGTAAACGCCTCAATACCTACATCGACGTCCTCCGGTTTCGCAGCGTCTGCCGATCTTGGCGTGCTTCTCTTCCTCCTTTCAACGCCATTTCTCCTCTTTTACCTCTCGATCTCCCTTCTCCCATCTTCACTGCCGATCATCTCACAGACGCCTTCCTTATCCGAAGAATAATCTATCGCCTCAGTCCCCTCGATCATCGTCAAACTTCCGATTCTGCTTTTTCTTCTTCTTCTTGTGAAGCGGAGGGCTGGTTAGCGAAGGTGGAGAGTACAAAATTAGGTAAAATGCGTTTTCTGCATCCGCTTTCTACTCGCTATGCTAAATACAACAACGAGCTATTTCGTAAGGAAGTGAACTTACTGGATTTTGGAATTTACGAAGTAGCTAAATCGTATACTCTTGGTTATACTAGTGGTACTCTTGTTCCTCGAATTACTAAGGTTGTAATGTTTCCTGATTCCCCCTGGATCGATGTGAAGAACTGCACCATTTTAGCAGTTTACGCCGGTGGAAAATTAGGGTTTGCTAAACATGGAGACGACAAATGGACGCTGATTGACGACCGTAATTTTCACTACGACGATGTGATTGTGTACAAGGGGCAGTTCTATGCAGTTGATCGATGGGGAACAGTTTTCTGGATTGATTCATCGATGAAACTGGTACAGTTTTCTCCTCCATTGTGTGGTTTTGGTAATCAGAAGCATTTGGTTGAGTGTGGCGGTGAACTCTATGTTGTTGATCGATTTCTAGATAAGGAGCCACTGTTATGGAATGCAGATATTTTTCATATTCATTGGTTGAATAATCTCATTGAAGATTCCCCTCCTAAAGTAATTGATTTCAAACTTCATAGGCTGGATCAAGAGTGGGGAAGATGGGTGGAGGTAAAAAATTTGGGGAATCAATCCTTTGTTTTGGGCAATGATTGTTGTTTCTCAGTTTCAACCCCAAATTTTGAAGGACTTAAAGGGAGTTGCATATATTTTACCCATACACCAAAATGCACTCTTGGGTATAACACTTATGTATATGAGCTTGAAGACAAAAGGATTCTGAAAGCATCTATCAATGATAATGCACCAATTTTTGGGCCTCCCCCAATTTGGCTGAATTTGGAGGCCACTCAGTTTGAAGAGAATGCAGCTGATGATCTATACATCTCTGCCTGTGCCTGCTAA

Protein sequence

MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSPIFTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWIDVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTHTPKCTLGYNTYVYELEDKRILKASINDNAPIFGPPPIWLNLEATQFEENAADDLYISACAC

Homology

[Close]

BLAST of Lsi01G005530 vs. Swiss-Prot
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.5e-41
Identity = 110/352 (31.25%), Postives = 174/352 (49.43%), Query Frame = 1


Query: 8   WSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLP------PFNAISPLLPLDLPSPI 67
           WS LP +L  +I  RL + I++ RFRS+CRSWR+S+P      PF     +L    P+  
Sbjct: 4   WSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKP 63

Query: 68  FTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVE-STKLGKMRFLHP 127
            T       FL R   +R++              SS  ++GWL K +     GK+  L P
Sbjct: 64  LTDHRRRGEFLSRSAFFRVT-------------LSSSPSQGWLIKSDVDVSSGKLHLLDP 123

Query: 128 LSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLG--YTSGTLVPRITKVVMFPDSPWIDV 187
           LS    +++    RK V+L +F I E+ ++Y +    T     P   +V +  D    + 
Sbjct: 124 LSRLPMEHS----RKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDN- 183

Query: 188 KNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSM 247
               +L + + GK+    + D K     +  + + D+IV+KGQ YA+D  G V+WI S +
Sbjct: 184 ---QVLGIRSTGKM---MYWDIKTWKAKEEGYEFSDIIVHKGQTYALDSIGIVYWIRSDL 243

Query: 248 KLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSPPKV 307
           K ++F P +  +   + LVEC GE Y+V+R + +      AD     +          K 
Sbjct: 244 KFIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEY---------AKT 303

Query: 308 IDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFT 351
           + FK+++ D E G+ +EVK+LG+++FV+  D CFSV    F G   + IYFT
Sbjct: 304 VGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFT 322

[Close]

BLAST of Lsi01G005530 vs. Swiss-Prot
Match: FB295_ARATH (Putative F-box protein At5g60060 OS=Arabidopsis thaliana GN=At5g60060 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-34
Identity = 115/372 (30.91%), Postives = 190/372 (51.08%), Query Frame = 1


Query: 1   MEDSSV---RWSDLPPELWPIIGKRLN----TYIDVLRFRSVCRSWRASLPPFNAISPLL 60
           M+ SS+   +WSDLP ++  +I  RL+      I +L  RSVC +WR SLP  N  + L 
Sbjct: 1   MDSSSLLPSQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLS 60

Query: 61  PLDLPSPIFTADHLTDAF--LIRRIIYRL-SPLDHRQTSDSAFSSSSCEAEGWLAKVEST 120
                 P +++   +  F  L +  +Y+L +PL+ R          +C     L K++ T
Sbjct: 61  KFPKYLPFWSSSSSSSGFFTLKQSNVYKLEAPLNPR----------TC-----LVKLQET 120

Query: 121 KLGKMRFLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTS--GTLVP-----R 180
             G MR L   S     +  E F  +++L +F +  V ++Y + Y +  G  VP      
Sbjct: 121 TPGIMRVLDLFSNDRICFLPENFPSKIDLQEFHVRLVRRTYRMEYANNGGGAVPCFWSLH 180

Query: 181 ITKVVMFPDSPWIDVKNCTILAVYAGGKLGFAKHG-DDKWTLIDDR-NFHYDDVIVYK-G 240
             KVV+         ++  I+A+++GGKLGF K G D+KW ++D+  N  Y+D+++YK  
Sbjct: 181 SDKVVILSSG-----EDSAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDN 240

Query: 241 QFYAVDRWGTVFWIDSSMKLVQFSPPLCGFG-NQKHLVEC-GGELYVVDRFLDKEPLLWN 300
           +   VD  G     D   K+   +  L G G ++KHLVEC GGE+++VD+++        
Sbjct: 241 RCIVVDDKGKTVIYDVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVDKYVKTV----- 300

Query: 301 ADIFHIHWLNNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPN 351
                  W  + I  S   V++F+++ L +E  RW EV++LG+ +  +G+DC FSV  P 
Sbjct: 301 -------WCKSDISKS---VVEFRVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQNPA 336

[Close]

BLAST of Lsi01G005530 vs. Swiss-Prot
Match: FB111_ARATH (F-box protein At2g17690 OS=Arabidopsis thaliana GN=At2g17690 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.2e-34
Identity = 121/425 (28.47%), Postives = 193/425 (45.41%), Query Frame = 1


Query: 8   WSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFN---AISPLLPLDLPSPIFTA 67
           WS LP EL  +I  RL + I+++RFRS+C+SWR+S    N   ++S  L    P  I  A
Sbjct: 4   WSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKNHSLSSPLIYFKPLQIILA 63

Query: 68  DHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHPLSTR 127
               +  ++ +  Y  + L          +SS    +GWL K ++    K R  H L+  
Sbjct: 64  RAQANGQILSK--YHGTVLSRATFFRVTLASSP--DQGWLIKSDTDL--KYRNFHLLNCL 123

Query: 128 YAKYNNELFRKEVNLLDFGIYEVAKSYTL-GYTSGTLVPRITKVVMFPDSPWIDVKNCTI 187
             K      RK ++L +F + E+ +SY + G  +        +V +      +   +  +
Sbjct: 124 SRKALGRS-RKLISLSEFIVSEIQESYAVVGRRTRETASEFKRVFLVR----VQGGDHRV 183

Query: 188 LAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSMKLVQF 247
           L +   GK+ F K G   W  I  +   + D ++ +G  YAVD  G ++WI S+  ++++
Sbjct: 184 LVIGIDGKIRFWKGGI--WNGIKKQVAQFSDFVLDEGLTYAVDTKGIMWWISSAYDIIRY 243

Query: 248 SPPLC-----GFGNQKHLVECGGELYVVDRFLDKEPL----------------------- 307
              L      G   +K  V C GELY+VDR +D+  L                       
Sbjct: 244 GTKLHENITNGSCGEKRFVRCRGELYIVDRLIDENLLKRKADSYDDNAIVHFRNADYTNA 303

Query: 308 -LW-----NADIF------HIHWLNNLI--------EDSPPKVIDFKLHRLDQEWGRWVE 367
            LW     N D F       IH L++ +        E  PPK I FK+++ D+E  +WVE
Sbjct: 304 DLWEDGNGNDDFFAAQAHRFIHVLHDNLGNVSCKPFERDPPKTIGFKVYKNDEELLKWVE 363

Query: 368 VKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTHTPKCTLGYNTYVYELEDKRILKAS 381
           VK+LG+++ V+  D CFSVS   F G   + IYFT   +        V++L+D  I   S
Sbjct: 364 VKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDKKE----EEVKVFKLDDGSITTMS 411

[Close]

BLAST of Lsi01G005530 vs. Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.1e-34
Identity = 125/415 (30.12%), Postives = 199/415 (47.95%), Query Frame = 1


Query: 6   VRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAIS----PLLPLDLPSPI 65
           V WS LP +L  +I K L +  D+++FRSVC SWR++  P + +     P+LP D    +
Sbjct: 2   VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILP-DNGGSL 61

Query: 66  FTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVES--TKLGKMRFLH 125
           F  D      L +R I  + P +    SDS          GWL KVE       K+  L 
Sbjct: 62  FP-DSAVGFRLSQRSILLIKPHEPCIESDSF---------GWLIKVEEDLNVPRKVTLLD 121

Query: 126 PL-STRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGY--TSGTLVPRI---TKVVMFPDS 185
           PL  TR +   N  F + +++  F + E+ + + L Y  T G +V  +     VV + D 
Sbjct: 122 PLCDTRNSIPEN--FPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDC 181

Query: 186 PWIDVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFW 245
              D K   +L ++  GKL   +  D  WT+I+D    YDDV+++ G+F+AVD  G    
Sbjct: 182 DG-DYK-FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVV 241

Query: 246 ID-SSMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWN----ADIF-HIHWL 305
           +D SS+KL   + P+ G G++K L+E  GE+ +VD +L  E +  +     +IF H  + 
Sbjct: 242 VDYSSLKLTLVASPVFG-GDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAFY 301

Query: 306 NNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGL-KGSC 365
            N       + + FK++R  +    WV+V +L ++   LG+D  FS S  +   L  GS 
Sbjct: 302 MN------ERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSS 361

Query: 366 IYFT------HTPKCTLGYNTYVYELEDKRI-LKASINDNAPIFGPPPIWLNLEA 395
           ++F                +  V++    +I L   + + A +F PPP W+   A
Sbjct: 362 VFFNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEYAKLFWPPPPWITSHA 394

[Close]

BLAST of Lsi01G005530 vs. Swiss-Prot
Match: FB110_ARATH (F-box protein At2g17036 OS=Arabidopsis thaliana GN=At2g17036 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-31
Identity = 114/401 (28.43%), Postives = 188/401 (46.88%), Query Frame = 1


Query: 8   WSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSPIFTADHL 67
           W+ LP +L  +I K L +  D+++FRSVC SWR++  P      L   +L  P F +D  
Sbjct: 4   WATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRL---LWAHNL--PFFPSD-- 63

Query: 68  TDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAE--GWLAKVEST--KLGKMRFLHPLST 127
            D   +  +I R++   H+       +   CEA+  GW+ KV        KM  L PLS+
Sbjct: 64  -DKPFLSNVILRVA---HQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKPLSS 123

Query: 128 RYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWIDVKN--- 187
               Y  +   +  ++  F + E+ +   L +     VP  T + +      +   N   
Sbjct: 124 S-RNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVVKYLNDDK 183

Query: 188 CTILAVYAGGKLGFAKHGDDKWTLIDDR-NFHYDDVIVYKGQFYAVDRWGTVFWID-SSM 247
             +L +   GKL   +  D +WT+I+D       D+I++ G+F+A+D  G    +D SS 
Sbjct: 184 FVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYSSF 243

Query: 248 KLVQFSPPLCGFGNQKHLVECGGELYVVD--RFLDKEPLLWNADIFHIHWLNNLIEDSPP 307
           KL   + PL G G++K L+E  GE+++VD    L+++P       F+ ++    +     
Sbjct: 244 KLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGG--FYSYFNETTVS---- 303

Query: 308 KVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVST----PNFEGLKGSCIYFTHT 367
               FK  +L +   RWVEV++LG++ F LG+D  FS ST    P   G      ++TH 
Sbjct: 304 --YKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYTHE 363

Query: 368 PKCTL--GYNTYVYELED-KRILKASINDNAPIFGPPPIWL 391
               +    N  V++    K  L   + + A +F PPP W+
Sbjct: 364 ESLVVMDDRNLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 384

[Close]

BLAST of Lsi01G005530 vs. TrEMBL
Match: A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 2.6e-224
Identity = 366/414 (88.41%), Postives = 383/414 (92.51%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           MEDS VRWSDLPPELWPIIGKRL+TYIDVLRFRSVCRSWRASLPPFNA+SPLLPLDLPSP
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  IFTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSS----------CEAEGWLAKVEST 120
           +F ADHLTDA+LIRRIIYRLSPLDH QT D A SSSS          C AEGWLAKVEST
Sbjct: 61  VFAADHLTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKVEST 120

Query: 121 KLGKMRFLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMF 180
           KLGKMRFLHPLSTRYAK N++L RKEVNLLDFGIYEVAKSYTLGYT+G+LVPRITKVVMF
Sbjct: 121 KLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKVVMF 180

Query: 181 PDSPWIDVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGT 240
           PDSPWIDVK CTILA+YAGGKLGFAKHGD+KWTLID  NFHYDDVIVYKGQFYAVDRWGT
Sbjct: 181 PDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDRWGT 240

Query: 241 VFWIDSSMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNL 300
           +FWIDSSMKLVQFSPPLCGFGNQKHLVEC GELYVVDRFLDKEPLLWNADIFHIHWLNNL
Sbjct: 241 IFWIDSSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHWLNNL 300

Query: 301 IEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFT 360
           IEDS PKVIDFKLHRLDQEWGRWVEVKNLGN+SFVLGNDCCFSVSTP F+GLKGSCIYFT
Sbjct: 301 IEDSSPKVIDFKLHRLDQEWGRWVEVKNLGNESFVLGNDCCFSVSTPYFKGLKGSCIYFT 360

Query: 361 HTPKCTLGYNTYVYELEDKRILKASINDNAPIFGPPPIWLNLEATQFEENAADD 405
           HTPKC LGYNT V+ELE+KRIL A  NDNAPIF PPPIWLNLEATQFEE+AAD+
Sbjct: 361 HTPKCALGYNTLVFELEEKRILNAFSNDNAPIFRPPPIWLNLEATQFEEDAADN 414

[Close]

BLAST of Lsi01G005530 vs. TrEMBL
Match: A0A0A0KLM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121
Identity = 219/411 (53.28%), Postives = 279/411 (67.88%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           M+D+ V WS+LPPE+WP +GK L+ YIDVLRFRSVCRSWR+SLPPF+  SP LPL  PSP
Sbjct: 26  MDDAGVPWSELPPEIWPAVGKHLHNYIDVLRFRSVCRSWRSSLPPFSQTSPPLPLPFPSP 85

Query: 61  IFTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHP 120
             +      AFL +  +YRL PL+H+ T + + SSS     G L KVE ++LGKMRFLHP
Sbjct: 86  YISPTLPLHAFLSQTTLYRLGPLNHQPTPNLSSSSSPTPPNGRLVKVEKSELGKMRFLHP 145

Query: 121 LSTRYAKYNNE---LFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWID 180
           LS +    N E       E NLL   I+E+A SY+L YT  T VP I+K+V+FP+S   D
Sbjct: 146 LSKKIIPRNLEDPSEGHNEFNLLHLRIHELAVSYSLKYTDTTCVPGISKIVLFPNSSGSD 205

Query: 181 VKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSS 240
           VK+CTI+AV+ GGKLGFA+ GD+KWTLID++NFHYDDVIVY  Q+Y VDRWGTVFWID S
Sbjct: 206 VKDCTIIAVFEGGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTVFWIDLS 265

Query: 241 MKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKE----PLLWNADIFHIHW------- 300
           M+LVQFSPPL G G+QKHLVECGGEL V+DRFL+KE    P++   +   +         
Sbjct: 266 MRLVQFSPPLIGLGHQKHLVECGGELLVIDRFLNKERHFQPVIAAVEDAEVQQQQQPFII 325

Query: 301 -LNNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGS 360
            + +   +S PK +DFK ++LDQEWG WVE+KNL NQS +LGNDCCFS+    FEG K +
Sbjct: 326 PVRHTPYNSLPKAVDFKAYKLDQEWGTWVELKNLRNQSIILGNDCCFSIEASEFEGCKKN 385

Query: 361 CIYFTHTPK---CTLGYNTYVYELEDKRI--LKASINDNAPIFGPPPIWLN 392
           C+Y+T   +   C     + V+++E KR   +         IF  PPIWL+
Sbjct: 386 CVYYTDVREDEFCKRS-TSRVFDVEGKRFGNILGHPGRMIEIFNSPPIWLS 435

[Close]

BLAST of Lsi01G005530 vs. TrEMBL
Match: A0A0A0KGT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.5e-118
Identity = 236/402 (58.71%), Postives = 289/402 (71.89%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           ME S VRWSDLPP+LWP+IGKRL+ YID++RFRSVCRSWRASLP  NAIS L PL +  P
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRFRSVCRSWRASLPQLNAISLLSPLLVSHP 60

Query: 61  IFTADH-LTDAFLIRRIIYRLSPLDHRQTSD--SAFSSSSCEAEGWLAKVESTKLGKMRF 120
               DH + DA +IRRIIY  SPL H QTS   S+ SSSS  + GWLAKVE+T LGK+RF
Sbjct: 61  F---DHRIEDALVIRRIIYGTSPLRHHQTSTYPSSSSSSSRASAGWLAKVETTNLGKLRF 120

Query: 121 LHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWID 180
           L PLST + K  N++FRKEVNLLDF I+EVAKSY L  T G ++  I KVV+FPDS WID
Sbjct: 121 LTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIGGIL-FINKVVVFPDSAWID 180

Query: 181 VKNCTIL-AVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDS 240
           VK  +I+ AV   GKLG+ K GD KWTLI   NF + D+IVY+G+ Y VDR GTVF IDS
Sbjct: 181 VKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFLIDS 240

Query: 241 SMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLD--KEPLLWNADIFHIHWLNNLIEDS 300
           SMKLVQ SP L    N+KHL+ECGGE+YVVDRFL+  K+P L          LN+  ++ 
Sbjct: 241 SMKLVQISPELGVISNEKHLIECGGEIYVVDRFLEQKKDPEL----------LNSWFDEP 300

Query: 301 PPKVIDFKLHRLDQE---WGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTH 360
            P+V+DFK+HRLDQE     RWVEVKNLGN++FV+G++  FSVS  +FEG K +CIYF+ 
Sbjct: 301 MPRVVDFKVHRLDQEIMGKSRWVEVKNLGNRAFVVGHN-SFSVSAADFEGFKENCIYFSD 360

Query: 361 TPKCTLGY--NTYVYELEDKRILKASINDNAPIFGPPPIWLN 392
             +  LGY  +T+V +LE++ I+KAS      IF  PPIWL+
Sbjct: 361 ELQSDLGYGFSTHVLDLEERTIVKAS----PQIFRAPPIWLH 383

[Close]

BLAST of Lsi01G005530 vs. TrEMBL
Match: A0A151QQP9_CAJCA (F-box protein SKIP23 OS=Cajanus cajan GN=KK1_046635 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.6e-91
Identity = 174/372 (46.77%), Postives = 233/372 (62.63%), Query Frame = 1


Query: 3   DSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSPIF 62
           D  V WS+LP ELWP IGK L  +IDV+RFRSVC S R+S+PP    SP  P+++P PI 
Sbjct: 2   DGKVDWSELPIELWPKIGKSLENHIDVVRFRSVCESCRSSIPPSLPNSPSFPMEIPHPI- 61

Query: 63  TADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHPLS 122
             +   D FL R  +Y + P D     +    SS    +GWL KVE ++   +  L P+S
Sbjct: 62  --NQSRDTFLKRATVYVIEPSDGASKLEPLAPSS----KGWLIKVEESRNHPLTLLSPIS 121

Query: 123 TRYAKYNNELFRKEV-NLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWIDVKNC 182
            R   Y +      + NLLD+ + E+ KSY++ +  G     ++KVV FP+SPW   +  
Sbjct: 122 DRKIMYPDGTSSPMLWNLLDYRVNELCKSYSI-HCRGRFSSAVSKVVFFPNSPWFGAEES 181

Query: 183 TILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWID-SSMKL 242
               ++  GKLGF K+GDDKWTL+DD+NF YDDVIV+KGQFY  D+WGT+ W+D SS+KL
Sbjct: 182 VACCIFLEGKLGFMKYGDDKWTLVDDKNFFYDDVIVFKGQFYVTDKWGTISWVDTSSLKL 241

Query: 243 VQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSPPKVID 302
           VQFSPPLCGFGN+KHL+E  G LYVVDRF + EP          ++L     D+   V  
Sbjct: 242 VQFSPPLCGFGNKKHLLESCGSLYVVDRFFESEPPR------RRNYLGPANRDA--AVEY 301

Query: 303 FKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTHTPKCTLGYN 362
           FK+H+LD+EWG WV+VKNLG+++FVLGN C FSV      G +G+CIYFT        ++
Sbjct: 302 FKVHKLDEEWGTWVDVKNLGDRAFVLGNSCSFSVKANELTGYQGNCIYFTDI------FD 351

Query: 363 TYVYELEDKRIL 373
             VY L+D+ I+
Sbjct: 362 VRVYNLDDRSIV 351

[Close]

BLAST of Lsi01G005530 vs. TrEMBL
Match: G7LA96_MEDTR (F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 9.2e-89
Identity = 168/379 (44.33%), Postives = 238/379 (62.80%), Query Frame = 1


Query: 3   DSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSPIF 62
           D  V WS LP ELWP IGK L+ +IDVLRFRSVC S+R+S+PP +  SP  PL +P P++
Sbjct: 21  DEIVDWSQLPIELWPKIGKYLDNHIDVLRFRSVCESFRSSIPPSHPNSPSFPLQIPHPVY 80

Query: 63  TADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHPLS 122
            +    + ++ +  +Y + P D    S+    + S  ++GWL KVE TK   +  L P+S
Sbjct: 81  NS---LNNYVNQSTVYIIEPTDASSNSNLEPLAPS-SSKGWLIKVEETKNQPVSLLSPIS 140

Query: 123 TRYAKY---NNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWIDVK 182
            R   Y   NN       NLLD+ + E+ KSY +  T+      I KV  +P+SPW  V+
Sbjct: 141 DRKLSYPLSNNNTSPMLWNLLDYRVIELCKSYKIEKTTPFSSSAI-KVAFYPNSPWTSVE 200

Query: 183 NCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWID-SSM 242
           +C    ++  GKLG  KHGD+KWTL+DD+NF+YDD+IV+KGQFY  D+WGT+ WID S++
Sbjct: 201 DCVACCIFQEGKLGLMKHGDEKWTLVDDKNFYYDDIIVFKGQFYVTDKWGTISWIDVSTL 260

Query: 243 KLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSPPKV 302
           +L+QFSPPLCGFGN+KHL+E  G LYVVDR+ +       +D    +++     D    V
Sbjct: 261 RLIQFSPPLCGFGNKKHLMESCGSLYVVDRYYE------ISDDMGRNYVRRRY-DRDTDV 320

Query: 303 IDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTHTPKCTLG 362
             FK+++LD+EWG+WV+VKNL +++F+L   C FSVST +  G +G+CIYF  T      
Sbjct: 321 ECFKVYKLDEEWGKWVDVKNLRDRAFILSKSCNFSVSTKDLIGYQGNCIYFRDT------ 380

Query: 363 YNTYVYELEDKRILKASIN 378
           Y+  +Y L+D RI   + N
Sbjct: 381 YDARMYNLDDHRITMVNFN 381

[Close]

BLAST of Lsi01G005530 vs. TAIR10
Match: AT1G65770.1 (AT1G65770.1 ascorbic acid mannose pathway regulator 1)

HSP 1 Score: 170.6 bits (431), Expect = 2.0e-42
Identity = 110/352 (31.25%), Postives = 174/352 (49.43%), Query Frame = 1


Query: 8   WSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLP------PFNAISPLLPLDLPSPI 67
           WS LP +L  +I  RL + I++ RFRS+CRSWR+S+P      PF     +L    P+  
Sbjct: 4   WSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKP 63

Query: 68  FTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVE-STKLGKMRFLHP 127
            T       FL R   +R++              SS  ++GWL K +     GK+  L P
Sbjct: 64  LTDHRRRGEFLSRSAFFRVT-------------LSSSPSQGWLIKSDVDVSSGKLHLLDP 123

Query: 128 LSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLG--YTSGTLVPRITKVVMFPDSPWIDV 187
           LS    +++    RK V+L +F I E+ ++Y +    T     P   +V +  D    + 
Sbjct: 124 LSRLPMEHS----RKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDN- 183

Query: 188 KNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSM 247
               +L + + GK+    + D K     +  + + D+IV+KGQ YA+D  G V+WI S +
Sbjct: 184 ---QVLGIRSTGKM---MYWDIKTWKAKEEGYEFSDIIVHKGQTYALDSIGIVYWIRSDL 243

Query: 248 KLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSPPKV 307
           K ++F P +  +   + LVEC GE Y+V+R + +      AD     +          K 
Sbjct: 244 KFIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEY---------AKT 303

Query: 308 IDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFT 351
           + FK+++ D E G+ +EVK+LG+++FV+  D CFSV    F G   + IYFT
Sbjct: 304 VGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFT 322

[Close]

BLAST of Lsi01G005530 vs. TAIR10
Match: AT5G60060.1 (AT5G60060.1 Protein of unknown function (DUF295))

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-36
Identity = 115/372 (30.91%), Postives = 190/372 (51.08%), Query Frame = 1


Query: 1   MEDSSV---RWSDLPPELWPIIGKRLN----TYIDVLRFRSVCRSWRASLPPFNAISPLL 60
           M+ SS+   +WSDLP ++  +I  RL+      I +L  RSVC +WR SLP  N  + L 
Sbjct: 1   MDSSSLLPSQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLS 60

Query: 61  PLDLPSPIFTADHLTDAF--LIRRIIYRL-SPLDHRQTSDSAFSSSSCEAEGWLAKVEST 120
                 P +++   +  F  L +  +Y+L +PL+ R          +C     L K++ T
Sbjct: 61  KFPKYLPFWSSSSSSSGFFTLKQSNVYKLEAPLNPR----------TC-----LVKLQET 120

Query: 121 KLGKMRFLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTS--GTLVP-----R 180
             G MR L   S     +  E F  +++L +F +  V ++Y + Y +  G  VP      
Sbjct: 121 TPGIMRVLDLFSNDRICFLPENFPSKIDLQEFHVRLVRRTYRMEYANNGGGAVPCFWSLH 180

Query: 181 ITKVVMFPDSPWIDVKNCTILAVYAGGKLGFAKHG-DDKWTLIDDR-NFHYDDVIVYK-G 240
             KVV+         ++  I+A+++GGKLGF K G D+KW ++D+  N  Y+D+++YK  
Sbjct: 181 SDKVVILSSG-----EDSAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDN 240

Query: 241 QFYAVDRWGTVFWIDSSMKLVQFSPPLCGFG-NQKHLVEC-GGELYVVDRFLDKEPLLWN 300
           +   VD  G     D   K+   +  L G G ++KHLVEC GGE+++VD+++        
Sbjct: 241 RCIVVDDKGKTVIYDVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVDKYVKTV----- 300

Query: 301 ADIFHIHWLNNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPN 351
                  W  + I  S   V++F+++ L +E  RW EV++LG+ +  +G+DC FSV  P 
Sbjct: 301 -------WCKSDISKS---VVEFRVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQNPA 336

[Close]

BLAST of Lsi01G005530 vs. TAIR10
Match: AT2G17690.1 (AT2G17690.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-35
Identity = 121/425 (28.47%), Postives = 193/425 (45.41%), Query Frame = 1


Query: 8   WSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFN---AISPLLPLDLPSPIFTA 67
           WS LP EL  +I  RL + I+++RFRS+C+SWR+S    N   ++S  L    P  I  A
Sbjct: 4   WSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKNHSLSSPLIYFKPLQIILA 63

Query: 68  DHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHPLSTR 127
               +  ++ +  Y  + L          +SS    +GWL K ++    K R  H L+  
Sbjct: 64  RAQANGQILSK--YHGTVLSRATFFRVTLASSP--DQGWLIKSDTDL--KYRNFHLLNCL 123

Query: 128 YAKYNNELFRKEVNLLDFGIYEVAKSYTL-GYTSGTLVPRITKVVMFPDSPWIDVKNCTI 187
             K      RK ++L +F + E+ +SY + G  +        +V +      +   +  +
Sbjct: 124 SRKALGRS-RKLISLSEFIVSEIQESYAVVGRRTRETASEFKRVFLVR----VQGGDHRV 183

Query: 188 LAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSMKLVQF 247
           L +   GK+ F K G   W  I  +   + D ++ +G  YAVD  G ++WI S+  ++++
Sbjct: 184 LVIGIDGKIRFWKGGI--WNGIKKQVAQFSDFVLDEGLTYAVDTKGIMWWISSAYDIIRY 243

Query: 248 SPPLC-----GFGNQKHLVECGGELYVVDRFLDKEPL----------------------- 307
              L      G   +K  V C GELY+VDR +D+  L                       
Sbjct: 244 GTKLHENITNGSCGEKRFVRCRGELYIVDRLIDENLLKRKADSYDDNAIVHFRNADYTNA 303

Query: 308 -LW-----NADIF------HIHWLNNLI--------EDSPPKVIDFKLHRLDQEWGRWVE 367
            LW     N D F       IH L++ +        E  PPK I FK+++ D+E  +WVE
Sbjct: 304 DLWEDGNGNDDFFAAQAHRFIHVLHDNLGNVSCKPFERDPPKTIGFKVYKNDEELLKWVE 363

Query: 368 VKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTHTPKCTLGYNTYVYELEDKRILKAS 381
           VK+LG+++ V+  D CFSVS   F G   + IYFT   +        V++L+D  I   S
Sbjct: 364 VKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDKKE----EEVKVFKLDDGSITTMS 411

[Close]

BLAST of Lsi01G005530 vs. TAIR10
Match: AT2G17030.1 (AT2G17030.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 146.4 bits (368), Expect = 4.0e-35
Identity = 125/415 (30.12%), Postives = 199/415 (47.95%), Query Frame = 1


Query: 6   VRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAIS----PLLPLDLPSPI 65
           V WS LP +L  +I K L +  D+++FRSVC SWR++  P + +     P+LP D    +
Sbjct: 2   VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILP-DNGGSL 61

Query: 66  FTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVES--TKLGKMRFLH 125
           F  D      L +R I  + P +    SDS          GWL KVE       K+  L 
Sbjct: 62  FP-DSAVGFRLSQRSILLIKPHEPCIESDSF---------GWLIKVEEDLNVPRKVTLLD 121

Query: 126 PL-STRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGY--TSGTLVPRI---TKVVMFPDS 185
           PL  TR +   N  F + +++  F + E+ + + L Y  T G +V  +     VV + D 
Sbjct: 122 PLCDTRNSIPEN--FPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDC 181

Query: 186 PWIDVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFW 245
              D K   +L ++  GKL   +  D  WT+I+D    YDDV+++ G+F+AVD  G    
Sbjct: 182 DG-DYK-FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVV 241

Query: 246 ID-SSMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWN----ADIF-HIHWL 305
           +D SS+KL   + P+ G G++K L+E  GE+ +VD +L  E +  +     +IF H  + 
Sbjct: 242 VDYSSLKLTLVASPVFG-GDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAFY 301

Query: 306 NNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGL-KGSC 365
            N       + + FK++R  +    WV+V +L ++   LG+D  FS S  +   L  GS 
Sbjct: 302 MN------ERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSS 361

Query: 366 IYFT------HTPKCTLGYNTYVYELEDKRI-LKASINDNAPIFGPPPIWLNLEA 395
           ++F                +  V++    +I L   + + A +F PPP W+   A
Sbjct: 362 VFFNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEYAKLFWPPPPWITSHA 394

[Close]

BLAST of Lsi01G005530 vs. TAIR10
Match: AT2G17036.1 (AT2G17036.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 114/401 (28.43%), Postives = 188/401 (46.88%), Query Frame = 1


Query: 8   WSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSPIFTADHL 67
           W+ LP +L  +I K L +  D+++FRSVC SWR++  P      L   +L  P F +D  
Sbjct: 3   WATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRL---LWAHNL--PFFPSD-- 62

Query: 68  TDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAE--GWLAKVEST--KLGKMRFLHPLST 127
            D   +  +I R++   H+       +   CEA+  GW+ KV        KM  L PLS+
Sbjct: 63  -DKPFLSNVILRVA---HQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKPLSS 122

Query: 128 RYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWIDVKN--- 187
               Y  +   +  ++  F + E+ +   L +     VP  T + +      +   N   
Sbjct: 123 S-RNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVVKYLNDDK 182

Query: 188 CTILAVYAGGKLGFAKHGDDKWTLIDDR-NFHYDDVIVYKGQFYAVDRWGTVFWID-SSM 247
             +L +   GKL   +  D +WT+I+D       D+I++ G+F+A+D  G    +D SS 
Sbjct: 183 FVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYSSF 242

Query: 248 KLVQFSPPLCGFGNQKHLVECGGELYVVD--RFLDKEPLLWNADIFHIHWLNNLIEDSPP 307
           KL   + PL G G++K L+E  GE+++VD    L+++P       F+ ++    +     
Sbjct: 243 KLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGG--FYSYFNETTVS---- 302

Query: 308 KVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVST----PNFEGLKGSCIYFTHT 367
               FK  +L +   RWVEV++LG++ F LG+D  FS ST    P   G      ++TH 
Sbjct: 303 --YKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYTHE 362

Query: 368 PKCTL--GYNTYVYELED-KRILKASINDNAPIFGPPPIWL 391
               +    N  V++    K  L   + + A +F PPP W+
Sbjct: 363 ESLVVMDDRNLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 383

[Close]

BLAST of Lsi01G005530 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo])

HSP 1 Score: 800.0 bits (2065), Expect = 1.9e-228
Identity = 371/411 (90.27%), Postives = 387/411 (94.16%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           MEDS VRWSDLPPELWPIIGKRL+TYIDVLRFRSVCRSWRASLPPFNA+SPLLPLDLPSP
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  IFTADHLTDAFLIRRIIYRLSPLDHRQT-------SDSAFSSSSCEAEGWLAKVESTKLG 120
           +F ADHLTDAFLIRRIIYRLSPLDH +T       + S+ SSS C AEGWLAKVESTKLG
Sbjct: 61  VFAADHLTDAFLIRRIIYRLSPLDHHKTFSFASSSTSSSSSSSYCAAEGWLAKVESTKLG 120

Query: 121 KMRFLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDS 180
           KMRFLHPLSTRYAK N++LFRKEVNLLDFGIYEVAKSYTLGYT+G+ VPRITKVVMFPDS
Sbjct: 121 KMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYEVAKSYTLGYTNGSPVPRITKVVMFPDS 180

Query: 181 PWIDVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFW 240
           PWIDVK CTILAVYAGGKLGFAKHGDDKWTLID RNFHYDDVIVYKGQFYAVDRWGTVFW
Sbjct: 181 PWIDVKKCTILAVYAGGKLGFAKHGDDKWTLIDHRNFHYDDVIVYKGQFYAVDRWGTVFW 240

Query: 241 IDSSMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNLIED 300
           IDSSM+LVQFSPPLCGFGNQKHLVEC GELYVVDRFLDKEPLLWNADIFHIHWLNNLIED
Sbjct: 241 IDSSMRLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHWLNNLIED 300

Query: 301 SPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTHTP 360
           SPPKVIDFKLHRLDQEWGRWVEVKNLGNQSF+LGNDCCFSVSTPNFEGLKGSCIYFTHTP
Sbjct: 301 SPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFILGNDCCFSVSTPNFEGLKGSCIYFTHTP 360

Query: 361 KCTLGYNTYVYELEDKRILKASINDNAPIFGPPPIWLNLEATQFEENAADD 405
           KC LGYNT+V+ELEDKRILKAS NDNAPIF PPPIWLNLE TQ EE+AAD+
Sbjct: 361 KCALGYNTHVFELEDKRILKASSNDNAPIFRPPPIWLNLEVTQIEEDAADN 411

[Close]

BLAST of Lsi01G005530 vs. NCBI nr
Match: gi|778719846|ref|XP_004134837.2| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 785.8 bits (2028), Expect = 3.7e-224
Identity = 366/414 (88.41%), Postives = 383/414 (92.51%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           MEDS VRWSDLPPELWPIIGKRL+TYIDVLRFRSVCRSWRASLPPFNA+SPLLPLDLPSP
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  IFTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSS----------CEAEGWLAKVEST 120
           +F ADHLTDA+LIRRIIYRLSPLDH QT D A SSSS          C AEGWLAKVEST
Sbjct: 61  VFAADHLTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKVEST 120

Query: 121 KLGKMRFLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMF 180
           KLGKMRFLHPLSTRYAK N++L RKEVNLLDFGIYEVAKSYTLGYT+G+LVPRITKVVMF
Sbjct: 121 KLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKVVMF 180

Query: 181 PDSPWIDVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGT 240
           PDSPWIDVK CTILA+YAGGKLGFAKHGD+KWTLID  NFHYDDVIVYKGQFYAVDRWGT
Sbjct: 181 PDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDRWGT 240

Query: 241 VFWIDSSMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKEPLLWNADIFHIHWLNNL 300
           +FWIDSSMKLVQFSPPLCGFGNQKHLVEC GELYVVDRFLDKEPLLWNADIFHIHWLNNL
Sbjct: 241 IFWIDSSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHWLNNL 300

Query: 301 IEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFT 360
           IEDS PKVIDFKLHRLDQEWGRWVEVKNLGN+SFVLGNDCCFSVSTP F+GLKGSCIYFT
Sbjct: 301 IEDSSPKVIDFKLHRLDQEWGRWVEVKNLGNESFVLGNDCCFSVSTPYFKGLKGSCIYFT 360

Query: 361 HTPKCTLGYNTYVYELEDKRILKASINDNAPIFGPPPIWLNLEATQFEENAADD 405
           HTPKC LGYNT V+ELE+KRIL A  NDNAPIF PPPIWLNLEATQFEE+AAD+
Sbjct: 361 HTPKCALGYNTLVFELEEKRILNAFSNDNAPIFRPPPIWLNLEATQFEEDAADN 414

[Close]

BLAST of Lsi01G005530 vs. NCBI nr
Match: gi|659072629|ref|XP_008466513.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.9e-124
Identity = 224/408 (54.90%), Postives = 284/408 (69.61%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           M+D+ V WS+LPPE+WP +GK L+TYIDVLRFRSVCRSWR+SLPPF   SP LPL  PSP
Sbjct: 1   MDDAGVPWSELPPEIWPAVGKHLHTYIDVLRFRSVCRSWRSSLPPFTQTSPPLPLRFPSP 60

Query: 61  IFTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHP 120
             +A+   DAFL + IIYRL+PL+H  + + + SSS     G L KVE ++LGKMRFLHP
Sbjct: 61  YISANLSVDAFLSQTIIYRLAPLNHEPSPNVSSSSSPPPRNGRLVKVEKSELGKMRFLHP 120

Query: 121 LSTRYAKYNNELFRK---EVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWID 180
           LS +  + N E   +   E+NLLD  + E+A SY+L Y+  T VP I+K+V+FP+S   D
Sbjct: 121 LSKQIIRCNLEDLSQGHNELNLLDLRMDELAVSYSLKYSDTTCVPGISKIVVFPNSSGSD 180

Query: 181 VKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSS 240
           VK+CTI+AV+  GKLGFA+ GD+KWTLID++NFHYDDVIVY  Q+Y VDRWGTVFWIDSS
Sbjct: 181 VKDCTIIAVFECGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTVFWIDSS 240

Query: 241 MKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKE----PLLWNADIFHIHWLNNLIE- 300
           M+LVQFSPPL G G+ KHLVECGGEL V+DRFLDKE    P +   D       + +I  
Sbjct: 241 MRLVQFSPPLIGLGHHKHLVECGGELLVIDRFLDKERHFQPAIAAVDDAEQQQHHFMIPV 300

Query: 301 -----DSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCI 360
                 S PK +DFK ++LDQEWG WVE+KNLGN+S +LGNDCCFS+    FEG K +C+
Sbjct: 301 QRPPYSSLPKAVDFKAYKLDQEWGTWVELKNLGNRSIILGNDCCFSIEASEFEGCKKNCV 360

Query: 361 YFTHTPKCTLG--YNTYVYELEDKRI--LKASINDNAPIFGPPPIWLN 392
           Y+T   +        + V+++E KRI  +         IF  PPIWL+
Sbjct: 361 YYTDVTEDAFSKRSRSRVFDVEGKRIGNILGYPGRMIGIFNTPPIWLS 408

[Close]

BLAST of Lsi01G005530 vs. NCBI nr
Match: gi|778698509|ref|XP_004149495.2| (PREDICTED: F-box protein At2g26160-like [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 2.6e-121
Identity = 219/411 (53.28%), Postives = 279/411 (67.88%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           M+D+ V WS+LPPE+WP +GK L+ YIDVLRFRSVCRSWR+SLPPF+  SP LPL  PSP
Sbjct: 26  MDDAGVPWSELPPEIWPAVGKHLHNYIDVLRFRSVCRSWRSSLPPFSQTSPPLPLPFPSP 85

Query: 61  IFTADHLTDAFLIRRIIYRLSPLDHRQTSDSAFSSSSCEAEGWLAKVESTKLGKMRFLHP 120
             +      AFL +  +YRL PL+H+ T + + SSS     G L KVE ++LGKMRFLHP
Sbjct: 86  YISPTLPLHAFLSQTTLYRLGPLNHQPTPNLSSSSSPTPPNGRLVKVEKSELGKMRFLHP 145

Query: 121 LSTRYAKYNNE---LFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWID 180
           LS +    N E       E NLL   I+E+A SY+L YT  T VP I+K+V+FP+S   D
Sbjct: 146 LSKKIIPRNLEDPSEGHNEFNLLHLRIHELAVSYSLKYTDTTCVPGISKIVLFPNSSGSD 205

Query: 181 VKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDSS 240
           VK+CTI+AV+ GGKLGFA+ GD+KWTLID++NFHYDDVIVY  Q+Y VDRWGTVFWID S
Sbjct: 206 VKDCTIIAVFEGGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTVFWIDLS 265

Query: 241 MKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLDKE----PLLWNADIFHIHW------- 300
           M+LVQFSPPL G G+QKHLVECGGEL V+DRFL+KE    P++   +   +         
Sbjct: 266 MRLVQFSPPLIGLGHQKHLVECGGELLVIDRFLNKERHFQPVIAAVEDAEVQQQQQPFII 325

Query: 301 -LNNLIEDSPPKVIDFKLHRLDQEWGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGS 360
            + +   +S PK +DFK ++LDQEWG WVE+KNL NQS +LGNDCCFS+    FEG K +
Sbjct: 326 PVRHTPYNSLPKAVDFKAYKLDQEWGTWVELKNLRNQSIILGNDCCFSIEASEFEGCKKN 385

Query: 361 CIYFTHTPK---CTLGYNTYVYELEDKRI--LKASINDNAPIFGPPPIWLN 392
           C+Y+T   +   C     + V+++E KR   +         IF  PPIWL+
Sbjct: 386 CVYYTDVREDEFCKRS-TSRVFDVEGKRFGNILGHPGRMIEIFNSPPIWLS 435

[Close]

BLAST of Lsi01G005530 vs. NCBI nr
Match: gi|449434450|ref|XP_004135009.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 3.5e-118
Identity = 236/402 (58.71%), Postives = 289/402 (71.89%), Query Frame = 1


Query: 1   MEDSSVRWSDLPPELWPIIGKRLNTYIDVLRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
           ME S VRWSDLPP+LWP+IGKRL+ YID++RFRSVCRSWRASLP  NAIS L PL +  P
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRFRSVCRSWRASLPQLNAISLLSPLLVSHP 60

Query: 61  IFTADH-LTDAFLIRRIIYRLSPLDHRQTSD--SAFSSSSCEAEGWLAKVESTKLGKMRF 120
               DH + DA +IRRIIY  SPL H QTS   S+ SSSS  + GWLAKVE+T LGK+RF
Sbjct: 61  F---DHRIEDALVIRRIIYGTSPLRHHQTSTYPSSSSSSSRASAGWLAKVETTNLGKLRF 120

Query: 121 LHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTSGTLVPRITKVVMFPDSPWID 180
           L PLST + K  N++FRKEVNLLDF I+EVAKSY L  T G ++  I KVV+FPDS WID
Sbjct: 121 LTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIGGIL-FINKVVVFPDSAWID 180

Query: 181 VKNCTIL-AVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDS 240
           VK  +I+ AV   GKLG+ K GD KWTLI   NF + D+IVY+G+ Y VDR GTVF IDS
Sbjct: 181 VKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFLIDS 240

Query: 241 SMKLVQFSPPLCGFGNQKHLVECGGELYVVDRFLD--KEPLLWNADIFHIHWLNNLIEDS 300
           SMKLVQ SP L    N+KHL+ECGGE+YVVDRFL+  K+P L          LN+  ++ 
Sbjct: 241 SMKLVQISPELGVISNEKHLIECGGEIYVVDRFLEQKKDPEL----------LNSWFDEP 300

Query: 301 PPKVIDFKLHRLDQE---WGRWVEVKNLGNQSFVLGNDCCFSVSTPNFEGLKGSCIYFTH 360
            P+V+DFK+HRLDQE     RWVEVKNLGN++FV+G++  FSVS  +FEG K +CIYF+ 
Sbjct: 301 MPRVVDFKVHRLDQEIMGKSRWVEVKNLGNRAFVVGHN-SFSVSAADFEGFKENCIYFSD 360

Query: 361 TPKCTLGY--NTYVYELEDKRILKASINDNAPIFGPPPIWLN 392
             +  LGY  +T+V +LE++ I+KAS      IF  PPIWL+
Sbjct: 361 ELQSDLGYGFSTHVLDLEERTIVKAS----PQIFRAPPIWLH 383

The following BLAST results are available for this feature:

BLAST of Lsi01G005530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB72_ARATH	3.5e-41	31.25	Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1	[more]
FB295_ARATH	1.1e-34	30.91	Putative F-box protein At5g60060 OS=Arabidopsis thaliana GN=At5g60060 PE=4 SV=1	[more]
FB111_ARATH	3.2e-34	28.47	F-box protein At2g17690 OS=Arabidopsis thaliana GN=At2g17690 PE=2 SV=1	[more]
SKI23_ARATH	7.1e-34	30.12	F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1	[more]
FB110_ARATH	2.5e-31	28.43	F-box protein At2g17036 OS=Arabidopsis thaliana GN=At2g17036 PE=2 SV=1	[more]

BLAST of Lsi01G005530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJJ1_CUCSA	2.6e-224	88.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1	[more]
A0A0A0KLM6_CUCSA	1.8e-121	53.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1	[more]
A0A0A0KGT9_CUCSA	2.5e-118	58.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1	[more]
A0A151QQP9_CAJCA	2.6e-91	46.77	F-box protein SKIP23 OS=Cajanus cajan GN=KK1_046635 PE=4 SV=1	[more]
G7LA96_MEDTR	9.2e-89	44.33	F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1	[more]

BLAST of Lsi01G005530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65770.1	2.0e-42	31.25	ascorbic acid mannose pathway regulator 1	[more]
AT5G60060.1	6.2e-36	30.91	Protein of unknown function (DUF295)	[more]
AT2G17690.1	1.8e-35	28.47	F-box family protein with a domain of unknown function (DUF295)	[more]
AT2G17030.1	4.0e-35	30.12	F-box family protein with a domain of unknown function (DUF295)	[more]
AT2G17036.1	1.4e-32	28.43	F-box family protein with a domain of unknown function (DUF295)	[more]

BLAST of Lsi01G005530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081066\|ref\|XP_008441132.1\|	1.9e-228	90.27	PREDICTED: F-box protein At2g17036 [Cucumis melo]	[more]
gi\|778719846\|ref\|XP_004134837.2\|	3.7e-224	88.41	PREDICTED: putative F-box protein At1g65770 [Cucumis sativus]	[more]
gi\|659072629\|ref\|XP_008466513.1\|	1.9e-124	54.90	PREDICTED: putative F-box protein At1g65770 [Cucumis melo]	[more]
gi\|778698509\|ref\|XP_004149495.2\|	2.6e-121	53.28	PREDICTED: F-box protein At2g26160-like [Cucumis sativus]	[more]
gi\|449434450\|ref\|XP_004135009.1\|	3.5e-118	58.71	PREDICTED: putative F-box protein At1g65770 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR005174	DUF295
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G005530.1	Lsi01G005530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 4..41 score: 4.4
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 314..365 score: 5.2
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 4..41 score: 1.
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 224..386 score: 5.2
None	No IPR available	PANTHER	PTHR13710:SF95	SUBFAMILY NOT NAMED	coord: 224..386 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G005530	Csa6G507410	Cucumber (Chinese Long) v2	culsiB434
Lsi01G005530	CSPI06G32260	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G005530	Cucsa.044040	Cucumber (Gy14) v1	cgylsiB022
Lsi01G005530	CmaCh20G007300	Cucurbita maxima (Rimu)	cmalsiB517
Lsi01G005530	CmaCh03G006400	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G005530	CmaCh07G003980	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G005530	CmoCh20G007270	Cucurbita moschata (Rifu)	cmolsiB502
Lsi01G005530	CmoCh03G006670	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G005530	CmoCh07G003920	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G005530	Cla014330	Watermelon (97103) v1	lsiwmB144
Lsi01G005530	MELO3C007952	Melon (DHL92) v3.5.1	lsimeB156
Lsi01G005530	ClCG01G020690	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G005530	Cla97C01G020190	Watermelon (97103) v2	lsiwmbB115
Lsi01G005530	Bhi03G000588	Wax gourd	lsiwgoB168
Lsi01G005530	Cp4.1LG19g08480	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G005530	Cp4.1LG10g10380	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G005530	CsGy6G031810	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G005530	Carg00550	Silver-seed gourd	carlsiB364
Lsi01G005530	Carg07928	Silver-seed gourd	carlsiB585
Lsi01G005530	CsaV3_6G047610	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi01G005530	Lsi04G017850	Bottle gourd (USVL1VR-Ls)	lsilsiB078

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G005530	Cucumber (Chinese Long) v3	cuclsiB181
Lsi01G005530	Watermelon (97103) v2	lsiwmbB118
Lsi01G005530	Wax gourd	lsiwgoB149
Lsi01G005530	Bottle gourd (USVL1VR-Ls)	lsilsiB081
Lsi01G005530	Cucumber (Gy14) v1	cgylsiB527
Lsi01G005530	Cucurbita maxima (Rimu)	cmalsiB306
Lsi01G005530	Cucurbita maxima (Rimu)	cmalsiB407
Lsi01G005530	Cucurbita moschata (Rifu)	cmolsiB293
Lsi01G005530	Cucurbita moschata (Rifu)	cmolsiB393
Lsi01G005530	Cucurbita pepo (Zucchini)	cpelsiB165
Lsi01G005530	Cucumber (Chinese Long) v2	culsiB165
Lsi01G005530	Wild cucumber (PI 183967)	cpilsiB164
Lsi01G005530	Melon (DHL92) v3.5.1	lsimeB146
Lsi01G005530	Watermelon (Charleston Gray)	lsiwcgB120
Lsi01G005530	Watermelon (97103) v1	lsiwmB129
Lsi01G005530	Cucumber (Gy14) v2	cgyblsiB150
Lsi01G005530	Melon (DHL92) v3.6.1	lsimedB152
Lsi01G005530	Melon (DHL92) v3.6.1	lsimedB163