Lsi04G017850 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G017850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	F-box family protein
Location	chr04 : 25065731 .. 25066909 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACTGGACTGAACTCCCGCCCGATCTCCTGCAGCTCATCTCTGATTACCTCATCGTCTACTCCGACTATCTCCGATTTCGAGCTGTCTGTCATAGATGGCGATCATCGGTTCCCAAAATCCCTCACCGTCTTCCTCCCCAGCTCCCCTGCCTCATAATTCCTCTGTACCACAACTCTCGTTGTGGTCTATTCAACTTCTCCGACAACAAAATCCACTTCCTCCACCTCCCGGAGGCTTCCCTTGGGAAGCGTCGGTGCGGTTCTTCTCACGGCTGGCTTGTGATCCTCGATGAAACTCCGACGATTCTCCTCCTCAACCCCTTAACCAGGGCCAAGCTCCGTCTACCTCCCCTCTCCACGTTCCCCAACGTCGTCTCTTTTGATTACTCCAGAGTTGGCCGAGAATACATGATCCGTACACCCACCGGACACATGTACACCCGAAATTTGCGGCAGATGCGCGATTCTTTTGTCAAGAAAATCGTTCTATCCTCAAGTCCATCGAACCAAAACGATTTCTCGGCCGTGGCGATTCTCAATCACAGCGGCGATTTGGCGTTTTACGGAAGCGGTGGTGGATCGTGGACTTTCGTAGACGACGCACCGTCTGATTGCGAAGATATTGTATACTCCGACGGGGTGTTCTACGCGGTGGATAAGTACGGTGTTGTTTCGGTGATGGATCTACGCGGTTCGCGTTCTCAAGTTTCACTGGTTGCGACGGAGAGGCAATTGGCTGGCGATATACAATATCTGGTTAAATCAGGGCAGGAATTGCTGCTGGTGAGTCGGTATTTGGATATCGTCAACGACGCCATGGTTGACGAACTGATATCTGTAATGTATCGGACGGTACGATTTGAGGTGTTTAGAATGGAATGGGAAGGGCCGCGGTGGGAGAAGGTTGAAAACTTGAATGAAATGGTGTTGTTTGTTGGGGGAAATTCTTCAATGGCTTTCTCTGCTGCTGATTTTGCTGGAATCTCAGGGAATTGTATATATTACACGGATGATTATTCCGACAACGATTATCAGGGACAGGGTGAAGAACCGGATATGGGGATTTTTCGATTGTGTGACGAAAGCTTCCAGCCGCTGCCGTATTACTCCGGCAGCTCCCATTCTCGCCGGCGTTTACTTCCACCAATTTGGGTTACTCCGAATCCTTGTTAA

mRNA sequence

ATGGCCGACTGGACTGAACTCCCGCCCGATCTCCTGCAGCTCATCTCTGATTACCTCATCGTCTACTCCGACTATCTCCGATTTCGAGCTGTCTGTCATAGATGGCGATCATCGGTTCCCAAAATCCCTCACCGTCTTCCTCCCCAGCTCCCCTGCCTCATAATTCCTCTGTACCACAACTCTCGTTGTGGTCTATTCAACTTCTCCGACAACAAAATCCACTTCCTCCACCTCCCGGAGGCTTCCCTTGGGAAGCGTCGGTGCGGTTCTTCTCACGGCTGGCTTGTGATCCTCGATGAAACTCCGACGATTCTCCTCCTCAACCCCTTAACCAGGGCCAAGCTCCGTCTACCTCCCCTCTCCACGTTCCCCAACGTCGTCTCTTTTGATTACTCCAGAGTTGGCCGAGAATACATGATCCGTACACCCACCGGACACATGTACACCCGAAATTTGCGGCAGATGCGCGATTCTTTTGTCAAGAAAATCGTTCTATCCTCAAGTCCATCGAACCAAAACGATTTCTCGGCCGTGGCGATTCTCAATCACAGCGGCGATTTGGCGTTTTACGGAAGCGGTGGTGGATCGTGGACTTTCGTAGACGACGCACCGTCTGATTGCGAAGATATTGTATACTCCGACGGGGTGTTCTACGCGGTGGATAAGTACGGTGTTGTTTCGGTGATGGATCTACGCGGTTCGCGTTCTCAAGTTTCACTGGTTGCGACGGAGAGGCAATTGGCTGGCGATATACAATATCTGGTTAAATCAGGGCAGGAATTGCTGCTGGTGAGTCGGTATTTGGATATCGTCAACGACGCCATGGTTGACGAACTGATATCTGTAATGTATCGGACGGTACGATTTGAGGTGTTTAGAATGGAATGGGAAGGGCCGCGGTGGGAGAAGGTTGAAAACTTGAATGAAATGGTGTTGTTTGTTGGGGGAAATTCTTCAATGGCTTTCTCTGCTGCTGATTTTGCTGGAATCTCAGGGAATTGTATATATTACACGGATGATTATTCCGACAACGATTATCAGGGACAGGGTGAAGAACCGGATATGGGGATTTTTCGATTGTGTGACGAAAGCTTCCAGCCGCTGCCGTATTACTCCGGCAGCTCCCATTCTCGCCGGCGTTTACTTCCACCAATTTGGGTTACTCCGAATCCTTGTTAA

Coding sequence (CDS)

ATGGCCGACTGGACTGAACTCCCGCCCGATCTCCTGCAGCTCATCTCTGATTACCTCATCGTCTACTCCGACTATCTCCGATTTCGAGCTGTCTGTCATAGATGGCGATCATCGGTTCCCAAAATCCCTCACCGTCTTCCTCCCCAGCTCCCCTGCCTCATAATTCCTCTGTACCACAACTCTCGTTGTGGTCTATTCAACTTCTCCGACAACAAAATCCACTTCCTCCACCTCCCGGAGGCTTCCCTTGGGAAGCGTCGGTGCGGTTCTTCTCACGGCTGGCTTGTGATCCTCGATGAAACTCCGACGATTCTCCTCCTCAACCCCTTAACCAGGGCCAAGCTCCGTCTACCTCCCCTCTCCACGTTCCCCAACGTCGTCTCTTTTGATTACTCCAGAGTTGGCCGAGAATACATGATCCGTACACCCACCGGACACATGTACACCCGAAATTTGCGGCAGATGCGCGATTCTTTTGTCAAGAAAATCGTTCTATCCTCAAGTCCATCGAACCAAAACGATTTCTCGGCCGTGGCGATTCTCAATCACAGCGGCGATTTGGCGTTTTACGGAAGCGGTGGTGGATCGTGGACTTTCGTAGACGACGCACCGTCTGATTGCGAAGATATTGTATACTCCGACGGGGTGTTCTACGCGGTGGATAAGTACGGTGTTGTTTCGGTGATGGATCTACGCGGTTCGCGTTCTCAAGTTTCACTGGTTGCGACGGAGAGGCAATTGGCTGGCGATATACAATATCTGGTTAAATCAGGGCAGGAATTGCTGCTGGTGAGTCGGTATTTGGATATCGTCAACGACGCCATGGTTGACGAACTGATATCTGTAATGTATCGGACGGTACGATTTGAGGTGTTTAGAATGGAATGGGAAGGGCCGCGGTGGGAGAAGGTTGAAAACTTGAATGAAATGGTGTTGTTTGTTGGGGGAAATTCTTCAATGGCTTTCTCTGCTGCTGATTTTGCTGGAATCTCAGGGAATTGTATATATTACACGGATGATTATTCCGACAACGATTATCAGGGACAGGGTGAAGAACCGGATATGGGGATTTTTCGATTGTGTGACGAAAGCTTCCAGCCGCTGCCGTATTACTCCGGCAGCTCCCATTCTCGCCGGCGTTTACTTCCACCAATTTGGGTTACTCCGAATCCTTGTTAA

Protein sequence

MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAVAILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIFRLCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC

Homology

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BLAST of Lsi04G017850 vs. Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 123/413 (29.78%), Postives = 199/413 (48.18%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSV-PKIP---HRLPPQLPCLIIP 60
           M DW+ LP DLL LIS  L    D ++FR+VC  WRS+  PK P   H L P LP     
Sbjct: 1   MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHL-PILPDNGGS 60

Query: 61  LYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDE----TPTILLLNPLTR 120
           L+ +S  G F  S   I  +   E  +       S GWL+ ++E       + LL+PL  
Sbjct: 61  LFPDSAVG-FRLSQRSILLIKPHEPCIE----SDSFGWLIKVEEDLNVPRKVTLLDPLCD 120

Query: 121 AKLRLPPLSTFPNVV---SFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSP 180
            +  +P    FP V+    F    +GRE+ +       Y   +  + +S   +  +    
Sbjct: 121 TRNSIP--ENFPRVLDMSKFKVRELGREFKLH------YFNTVGDIVESLYLEKAVVKYL 180

Query: 181 SNQNDFSAVAILNH-SGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSV 240
               D+  V +  H SG LA + S   +WT ++D PS  +D++  DG F+AVD  G   V
Sbjct: 181 DCDGDYKFVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVV 240

Query: 241 MDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYLDIV----NDAMVDELIS--- 300
           +D   S  +++LVA+     GD ++L++S  E+LLV  YL +     +   V+E+     
Sbjct: 241 VDY--SSLKLTLVASP-VFGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPA 300

Query: 301 --VMYRTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGI-SGNCIYYT 360
             +  RTV+F+V+R       W  V +L + +LF+G +S+ + SA+D   +  G+ +++ 
Sbjct: 301 FYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVFFN 360

Query: 361 DDYSDNDYQGQGEEPDMGIFRLCD---ESFQPLPYYSGSSHSRRRLLPPIWVT 389
            +  + +  G  ++ D+G+F       E  Q LP Y     ++    PP W+T
Sbjct: 361 GNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEY-----AKLFWPPPPWIT 391

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BLAST of Lsi04G017850 vs. Swiss-Prot
Match: FB110_ARATH (F-box protein At2g17036 OS=Arabidopsis thaliana GN=At2g17036 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.8e-18
Identity = 103/370 (27.84%), Postives = 164/370 (44.32%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSV-PK---IPHRLP-------PQ 60
           M DW  LP DLL LIS  L    D ++FR+VC  WRS+  PK     H LP       P 
Sbjct: 1   MMDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPFFPSDDKPF 60

Query: 61  LPCLIIPLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLV-ILDE---TPTIL 120
           L  +I+ + H S   +     N+       EA L         GW+V + D    +  + 
Sbjct: 61  LSNVILRVAHQS---ILLIKPNEPQC----EADL--------FGWIVKVWDNIYVSRKMT 120

Query: 121 LLNPLTRAKLRLPP-LSTFPNVVSFDYSRVGREYMIRTPTGHM---YTRNLRQMRDSFVK 180
           LL PL+ ++   P  L    ++  F    + RE  +  P  +    +T    ++  + VK
Sbjct: 121 LLKPLSSSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVVK 180

Query: 181 KIVLSSSPSNQNDFSAVAILNHSGDLAFYGSGGGSWTFVDD-APSDCEDIVYSDGVFYAV 240
            +       N + F  + IL + G LA + S    WT ++D  PS C+D++  DG F+A+
Sbjct: 181 YL-------NDDKFVLLTILEY-GKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAI 240

Query: 241 DKYGVVSVMDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVS-RYLDIVNDAMVDEL 300
           D  G   V+D   S  +++L A      GD ++L++S  E+ LV   +            
Sbjct: 241 DYNGRTVVVDY--SSFKLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGF 300

Query: 301 ISVMYRTV---RFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADF----AGISG 343
            S    T    +F+ F++     RW +VE+L + + F+G +S+ + S AD      G   
Sbjct: 301 YSYFNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGS 345

[Close]

BLAST of Lsi04G017850 vs. Swiss-Prot
Match: FB295_ARATH (Putative F-box protein At5g60060 OS=Arabidopsis thaliana GN=At5g60060 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13
Identity = 113/394 (28.68%), Postives = 175/394 (44.42%), Query Frame = 1


Query: 2   ADWTELPPDLLQLISDYLIVYSD----YLRFRAVCHRWRSSVP--KIPHRLPPQLPCLII 61
           + W++LP D+L+LISD L   S      L  R+VC  WR S+P     +RL      L  
Sbjct: 9   SQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKFPKYLPF 68

Query: 62  PLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDET-PTIL-LLNPLTRA 121
               +S  G F    + ++ L   EA L  R C      LV L ET P I+ +L+  +  
Sbjct: 69  WSSSSSSSGFFTLKQSNVYKL---EAPLNPRTC------LVKLQETTPGIMRVLDLFSND 128

Query: 122 KLRLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVK----KIVLSSSP 181
           ++   P   FP+ +      V    ++R      Y  N       F      K+V+ SS 
Sbjct: 129 RICFLP-ENFPSKIDLQEFHVR---LVRRTYRMEYANNGGGAVPCFWSLHSDKVVILSSG 188

Query: 182 SNQNDFSAVAILNHSGDLAFYGSGGGS-WTFVDDAPSDC-EDIV-YSDGVFYAVDKYG-- 241
            +    SA+  ++  G L F  SG    W  +D++ +   EDI+ Y D     VD  G  
Sbjct: 189 ED----SAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDNRCIVVDDKGKT 248

Query: 242 VVSVMDLRGSRSQVSLVATERQLAGDIQYLVK-SGQELLLVSRYLDIVNDAMVDELISVM 301
           V+  +D + S     LV       G  ++LV+ SG E+ LV +Y+  V          + 
Sbjct: 249 VIYDVDFKVSDLAEGLVGG----GGHKKHLVECSGGEVFLVDKYVKTVWCKS-----DIS 308

Query: 302 YRTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAG-ISGNCIYYTDDYS 361
              V F V+ ++ E  RWE+V +L ++ LF+G + S  FS  + AG ++G  I+Y+D  +
Sbjct: 309 KSVVEFRVYNLKREEKRWEEVRDLGDVALFIGDDCS--FSVQNPAGDLAGGFIFYSDYRN 368

Query: 362 DNDYQGQGEEPDMGIFRL---CDESFQPLPYYSG 374
               +G   + D G+F +    D  F   P Y G
Sbjct: 369 GGRSRGICSDGD-GVFNVDMQGDFVFSIKPNYFG 373

[Close]

BLAST of Lsi04G017850 vs. Swiss-Prot
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.8e-13
Identity = 93/380 (24.47%), Postives = 160/380 (42.11%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVP----KIPHRLPPQL---PCL 60
           MADW+ LP DLL +I+  L    +  RFR++C  WRSSVP    K P R  P +   P  
Sbjct: 1   MADWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNP 60

Query: 61  IIPLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILD---ETPTILLLNPL 120
             PL  + R G F    ++  F  +  +S        S GWL+  D    +  + LL+PL
Sbjct: 61  NKPLTDHRRRGEFL---SRSAFFRVTLSS------SPSQGWLIKSDVDVSSGKLHLLDPL 120

Query: 121 TRAKLRLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPS 180
           +R  L +       ++  F  + +   Y +         R  ++ R  F K++ L     
Sbjct: 121 SR--LPMEHSRKRVDLSEFTITEIREAYQVHD------WRTRKETRPIF-KRVALVKDKE 180

Query: 181 NQNDFSAVAILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMD 240
             N    V  +  +G + ++     +W   ++   +  DI+   G  YA+D  G+  V  
Sbjct: 181 GDNQ---VLGIRSTGKMMYWDI--KTWKAKEEG-YEFSDIIVHKGQTYALDSIGI--VYW 240

Query: 241 LRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYL-DIVNDAMVDELISVMYRTVRF 300
           +R     +          GD + LV+   E  +V R + +       D+      +TV F
Sbjct: 241 IRSDLKFIRFGPLVGDWTGD-RRLVECCGEFYIVERLVGESTWKRKADDTGYEYAKTVGF 300

Query: 301 EVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQ-- 360
           +V++ + E  +  +V++L +    +  ++  +  A +F G   N IY+TDD     ++  
Sbjct: 301 KVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDDTMIKVFKLD 353

Query: 361 -GQGEEPDMGIFRLCDESFQ 367
            G G   +  I+      FQ
Sbjct: 361 NGNGSSIETTIYPYAQSCFQ 353

[Close]

BLAST of Lsi04G017850 vs. Swiss-Prot
Match: FB117_ARATH (F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.3e-12
Identity = 88/356 (24.72%), Postives = 149/356 (41.85%), Query Frame = 1


Query: 3   DWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHNSR 62
           +W+ELP DL+ L ++     SD LR R++C  WRS+    P      LP           
Sbjct: 5   EWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAA-ATPKSFQCNLP----------- 64

Query: 63  CGLFNFSDNKIHFLHLPEASL----GKRRCGSSHGWLV---ILDETPTILLLNPLTRAKL 122
                 S NK+    L   +     G   C S  GWL+    + E+  I LL+P  R +L
Sbjct: 65  ------SSNKMIETVLSPTTFFRVTGPSSC-SYKGWLIRTKQVSESSKINLLSPFFR-QL 124

Query: 123 RLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDF 182
             P   T  +++ F+ S + + Y I     H++ + L       ++ ++    PS  +  
Sbjct: 125 LTPSQQTL-DLLKFEVSEIRQSYEI-----HIFDKYL-------IQGVIGKEGPS--HIL 184

Query: 183 SAVAILNH------SGDLAFYGSGGGS----WTFVDDAPSDCEDIVYSDGVFYAVDKYGV 242
           S V  L++        D  +    G      WT + +   D  DI+   G  YA+D  G 
Sbjct: 185 SRVVFLDNLIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGA 244

Query: 243 VSVMDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDE-LISVMY 302
           +  + L    S +SL+     +  D        + L+     L I++   + +  I    
Sbjct: 245 IWWISL----SPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCIIHQLRLKKAYIRRSQ 304

Query: 303 RTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDD 341
           RTV F+V++M+    +W +V +L +  L V  +S     A+++ G   N IY+ D+
Sbjct: 305 RTVGFKVYKMDEYVAKWVEVRSLGDKALIVARDSCFTVVASEYHGCLNNSIYFVDN 321

[Close]

BLAST of Lsi04G017850 vs. TrEMBL
Match: E5GCD1_CUCME (Ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 8.7e-214
Identity = 360/392 (91.84%), Postives = 372/392 (94.90%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHN 60
           MADWTELPPDLLQ ISDYL VYSDYLRFR VC  WRSSVPKIPHRLPPQLPCLIIPLYH+
Sbjct: 1   MADWTELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPLYHD 60

Query: 61  SRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPPL 120
            RCGLFNFSDNKIHFL+LPEASL KR CGSSHGWL ILDETP+ILLLNPLTRAK RLPPL
Sbjct: 61  CRCGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPL 120

Query: 121 STFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAVAI 180
           STFPNVVSFDYSRVGREY+IRTPTGH+YTRNLRQMRDSFVKKIVLSSSPSNQNDF AVAI
Sbjct: 121 STFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQNDFLAVAI 180

Query: 181 LNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQVSL 240
           LNHSGDLAF  SGGGSWTFVDDAPSDCED++Y+DGVFYAVDKYGVVS+MDLRGSRSQVSL
Sbjct: 181 LNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQVSL 240

Query: 241 VATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEGPR 300
           VATERQLAGDIQYLV+ GQELLLVSRYLDIVND M DELISVMYRTVRFEVFRMEWEGPR
Sbjct: 241 VATERQLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVMYRTVRFEVFRMEWEGPR 300

Query: 301 WEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIFRL 360
           WEKVENLNEM LFVGGNSSMAFSAADF  ISGNCIYYTDDYSD+DYQGQGEEPDMGIFRL
Sbjct: 301 WEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQGQGEEPDMGIFRL 360

Query: 361 CDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
           CDESF+PLPYYSG SHSRRRLLPPIWVTPNPC
Sbjct: 361 CDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392

[Close]

BLAST of Lsi04G017850 vs. TrEMBL
Match: A0A0A0L370_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652860 PE=4 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 1.7e-209
Identity = 355/392 (90.56%), Postives = 364/392 (92.86%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHN 60
           MADWTELPPDLL  ISDYL VYSDYLRFR VC  WR SVPKIPHRLPPQLPCLIIPLYHN
Sbjct: 1   MADWTELPPDLLHQISDYLTVYSDYLRFRVVCWNWRFSVPKIPHRLPPQLPCLIIPLYHN 60

Query: 61  SRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPPL 120
            RCGLFNFSDNKIHFL+LPE SL KR CGSSHGWL I+DETP ILLLNP TRAKL LPPL
Sbjct: 61  CRCGLFNFSDNKIHFLYLPEISLRKRPCGSSHGWLTIVDETPPILLLNPFTRAKLWLPPL 120

Query: 121 STFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAVAI 180
           STFPNVVSFDYSRVGREY+IRTPTGH+YTRNLRQMRDSFVKKIVLSSSPSN NDF AVAI
Sbjct: 121 STFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNPNDFLAVAI 180

Query: 181 LNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQVSL 240
           LNHSGDLAF  SGGGSWTFVDDAPSDCED++YSDGVFYAVDKYGVVS+MDLRGSRSQVSL
Sbjct: 181 LNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYSDGVFYAVDKYGVVSLMDLRGSRSQVSL 240

Query: 241 VATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEGPR 300
           VATERQLAGDIQYLVK GQELLLVSRYLDIVND M DELI VMYRTVRFEVFRMEWEGPR
Sbjct: 241 VATERQLAGDIQYLVKLGQELLLVSRYLDIVNDGMEDELIPVMYRTVRFEVFRMEWEGPR 300

Query: 301 WEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIFRL 360
           WEKVENLNEM LFVGGNSSMAFSAADF  ISGNCIYYTDDYSD+DYQ QGEEPDMGIFRL
Sbjct: 301 WEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQEQGEEPDMGIFRL 360

Query: 361 CDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
           CDESF+PLPYYSG SHSRRRLLPPIWVTPNPC
Sbjct: 361 CDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392

[Close]

BLAST of Lsi04G017850 vs. TrEMBL
Match: A5AJY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031843 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 4.0e-126
Identity = 222/394 (56.35%), Postives = 291/394 (73.86%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLY-- 60
           MADW++L P+LL  I+    +Y+DY+RFRAVCH WR+SVPK PH LP QLP L++P    
Sbjct: 1   MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQP 60

Query: 61  HNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLP 120
           H++    F+ S NK HFL LPEAS  +RR GSSHGWL+ILDE P I LLNPLTR+K+ LP
Sbjct: 61  HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 121 PLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAV 180
           PLSTFPNVV F+++ VGREY +RT +G +YTR+L++MRDSF+KK +LSSSP+N +DF AV
Sbjct: 121 PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAV 180

Query: 181 AILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQV 240
            ILN +GDLA       SWTF++DA S  ED+++  G+FYAV+KYG ++V D+ GS  +V
Sbjct: 181 VILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRV 240

Query: 241 SLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEG 300
           S++   +Q  GD+QYLV+SG+ELLLV+RYLD+  D   D+  S++YRT RF+V R++ + 
Sbjct: 241 SIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQ-TSLIYRTTRFQVCRLDSKA 300

Query: 301 PRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIF 360
           PRWE V +L +  LF+G N S++ S+ DF G  GNCIYYTDDYS+++Y G G E D+GIF
Sbjct: 301 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 360

Query: 361 RLCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
            L D S +PLP     SH R R  PP+WVTPNPC
Sbjct: 361 NLEDGSIEPLP----CSHFRIRWPPPLWVTPNPC 389

[Close]

BLAST of Lsi04G017850 vs. TrEMBL
Match: B9R8H5_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1599830 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.5e-125
Identity = 216/395 (54.68%), Postives = 288/395 (72.91%), Query Frame = 1


Query: 3   DWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHN-- 62
           DW++LPP+L+++IS  L +YSDYL  RAVCH WR S+PK P+ LPPQLP L++P   +  
Sbjct: 4   DWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQSQS 63

Query: 63  --SRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLP 122
             SR   F+ S NK HFL+LPE S  KR CGSSHGWL+ILD+TPTILL+NPLTRAKL LP
Sbjct: 64  NQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLP 123

Query: 123 PLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAV 182
           PLS+FPNV+SF+YS +GREY +R   G   T +LRQMRDSF++K+VLSSSP   N+F  +
Sbjct: 124 PLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVI 183

Query: 183 AILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQV 242
           AILN + DLA+  +G  SW+ V++A S CED+++ +G+FYAV+K G + + D+     +V
Sbjct: 184 AILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRV 243

Query: 243 SLVATERQLAGDIQYLVKSGQELLLVSRYLDIVND-AMVDELISVMYRTVRFEVFRMEWE 302
           S + T RQ  GD+QYLV SG ELLLV+RYLD+  +    D    ++YRT+RFEVFR++W 
Sbjct: 244 SFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWN 303

Query: 303 GPRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGI 362
           GP+W ++  L +  LF+G NSS++ SA DF+G  GNCIYYTDDY D +Y G   + D+GI
Sbjct: 304 GPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGI 363

Query: 363 FRLCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
           F+LCDE+ +PLP Y  +  S  +  PP+WV+PNPC
Sbjct: 364 FKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNPC 398

[Close]

BLAST of Lsi04G017850 vs. TrEMBL
Match: A0A067KPD0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08149 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.3e-121
Identity = 215/393 (54.71%), Postives = 282/393 (71.76%), Query Frame = 1


Query: 3   DWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHN-- 62
           DWT+LPP+L++ IS  L +Y+DYL FRAVC  WRSS+P+ P+ LPPQLP L++P   +  
Sbjct: 4   DWTQLPPELVETISKSLTIYADYLHFRAVCRTWRSSIPRTPNHLPPQLPWLMLPQSQSDQ 63

Query: 63  SRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPPL 122
           S    FN S N+ HFL+LPEAS  KR CGSSHGWL+ILD++P ILL+NPLTRAKL LPP+
Sbjct: 64  SHRAFFNLSTNRFHFLNLPEASHRKRHCGSSHGWLIILDDSPIILLINPLTRAKLSLPPV 123

Query: 123 STFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAVAI 182
           S+FPNVVSF+YS +GREY +R   G   TR+LRQMRD F+KK++LS SP  + +F A+AI
Sbjct: 124 SSFPNVVSFNYSDIGREYALRNSLGDRCTRSLRQMRDWFIKKVILSCSPLTEGNFVAMAI 183

Query: 183 LNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQVSL 242
           LN +GDLA+  +G  SWT +++A    ED+V  +G+FYAV+K G ++V D+ G   +V  
Sbjct: 184 LNQTGDLAYCRNGDQSWTIIENARYFSEDVVCFNGLFYAVNKAGQIAVCDVNGDSPEVWF 243

Query: 243 VATERQLAGDIQYLVKSGQELLLVSRYLDIVNDA-MVDELISVMYRTVRFEVFRMEWEGP 302
           + T RQ  GD+QYLV S  ELLLV+RYLD+  +    D    ++YRT+RFEV R+EW GP
Sbjct: 244 IETPRQHGGDLQYLVSSENELLLVTRYLDLEFEVDHPDMQPHLIYRTMRFEVSRLEWGGP 303

Query: 303 RWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIFR 362
           RW ++ +L +  LF+G N+S++ SA DF G  GNCIYYTDDYSD +Y     E D+GIF+
Sbjct: 304 RWARMRSLGDKALFIGENTSLSLSANDFFGCMGNCIYYTDDYSDTNYDDHFGEHDLGIFK 363

Query: 363 LCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
           L D S + LP Y   S SR R  PP+WV+PNPC
Sbjct: 364 LWDGSIESLPCYPRHSRSRLRWPPPLWVSPNPC 396

[Close]

BLAST of Lsi04G017850 vs. TAIR10
Match: AT2G17030.1 (AT2G17030.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 141.7 bits (356), Expect = 9.4e-34
Identity = 123/413 (29.78%), Postives = 199/413 (48.18%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSV-PKIP---HRLPPQLPCLIIP 60
           M DW+ LP DLL LIS  L    D ++FR+VC  WRS+  PK P   H L P LP     
Sbjct: 1   MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHL-PILPDNGGS 60

Query: 61  LYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDE----TPTILLLNPLTR 120
           L+ +S  G F  S   I  +   E  +       S GWL+ ++E       + LL+PL  
Sbjct: 61  LFPDSAVG-FRLSQRSILLIKPHEPCIE----SDSFGWLIKVEEDLNVPRKVTLLDPLCD 120

Query: 121 AKLRLPPLSTFPNVV---SFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSP 180
            +  +P    FP V+    F    +GRE+ +       Y   +  + +S   +  +    
Sbjct: 121 TRNSIP--ENFPRVLDMSKFKVRELGREFKLH------YFNTVGDIVESLYLEKAVVKYL 180

Query: 181 SNQNDFSAVAILNH-SGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSV 240
               D+  V +  H SG LA + S   +WT ++D PS  +D++  DG F+AVD  G   V
Sbjct: 181 DCDGDYKFVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVV 240

Query: 241 MDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYLDIV----NDAMVDELIS--- 300
           +D   S  +++LVA+     GD ++L++S  E+LLV  YL +     +   V+E+     
Sbjct: 241 VDY--SSLKLTLVASP-VFGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPA 300

Query: 301 --VMYRTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGI-SGNCIYYT 360
             +  RTV+F+V+R       W  V +L + +LF+G +S+ + SA+D   +  G+ +++ 
Sbjct: 301 FYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVFFN 360

Query: 361 DDYSDNDYQGQGEEPDMGIFRLCD---ESFQPLPYYSGSSHSRRRLLPPIWVT 389
            +  + +  G  ++ D+G+F       E  Q LP Y     ++    PP W+T
Sbjct: 361 GNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEY-----AKLFWPPPPWIT 391

[Close]

BLAST of Lsi04G017850 vs. TAIR10
Match: AT2G17036.1 (AT2G17036.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-18
Identity = 102/368 (27.72%), Postives = 163/368 (44.29%), Query Frame = 1


Query: 3   DWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSV-PK---IPHRLP-------PQLP 62
           DW  LP DLL LIS  L    D ++FR+VC  WRS+  PK     H LP       P L 
Sbjct: 2   DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPFFPSDDKPFLS 61

Query: 63  CLIIPLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLV-ILDE---TPTILLL 122
            +I+ + H S   +     N+       EA L         GW+V + D    +  + LL
Sbjct: 62  NVILRVAHQS---ILLIKPNEPQC----EADL--------FGWIVKVWDNIYVSRKMTLL 121

Query: 123 NPLTRAKLRLPP-LSTFPNVVSFDYSRVGREYMIRTPTGHM---YTRNLRQMRDSFVKKI 182
            PL+ ++   P  L    ++  F    + RE  +  P  +    +T    ++  + VK +
Sbjct: 122 KPLSSSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVVKYL 181

Query: 183 VLSSSPSNQNDFSAVAILNHSGDLAFYGSGGGSWTFVDD-APSDCEDIVYSDGVFYAVDK 242
                  N + F  + IL + G LA + S    WT ++D  PS C+D++  DG F+A+D 
Sbjct: 182 -------NDDKFVLLTILEY-GKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDY 241

Query: 243 YGVVSVMDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVS-RYLDIVNDAMVDELIS 302
            G   V+D   S  +++L A      GD ++L++S  E+ LV   +             S
Sbjct: 242 NGRTVVVDY--SSFKLTLAANPLIGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYS 301

Query: 303 VMYRTV---RFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADF----AGISGNC 343
               T    +F+ F++     RW +VE+L + + F+G +S+ + S AD      G     
Sbjct: 302 YFNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFV 344

[Close]

BLAST of Lsi04G017850 vs. TAIR10
Match: AT5G60060.1 (AT5G60060.1 Protein of unknown function (DUF295))

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-15
Identity = 113/394 (28.68%), Postives = 175/394 (44.42%), Query Frame = 1


Query: 2   ADWTELPPDLLQLISDYLIVYSD----YLRFRAVCHRWRSSVP--KIPHRLPPQLPCLII 61
           + W++LP D+L+LISD L   S      L  R+VC  WR S+P     +RL      L  
Sbjct: 9   SQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKFPKYLPF 68

Query: 62  PLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDET-PTIL-LLNPLTRA 121
               +S  G F    + ++ L   EA L  R C      LV L ET P I+ +L+  +  
Sbjct: 69  WSSSSSSSGFFTLKQSNVYKL---EAPLNPRTC------LVKLQETTPGIMRVLDLFSND 128

Query: 122 KLRLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVK----KIVLSSSP 181
           ++   P   FP+ +      V    ++R      Y  N       F      K+V+ SS 
Sbjct: 129 RICFLP-ENFPSKIDLQEFHVR---LVRRTYRMEYANNGGGAVPCFWSLHSDKVVILSSG 188

Query: 182 SNQNDFSAVAILNHSGDLAFYGSGGGS-WTFVDDAPSDC-EDIV-YSDGVFYAVDKYG-- 241
            +    SA+  ++  G L F  SG    W  +D++ +   EDI+ Y D     VD  G  
Sbjct: 189 ED----SAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDNRCIVVDDKGKT 248

Query: 242 VVSVMDLRGSRSQVSLVATERQLAGDIQYLVK-SGQELLLVSRYLDIVNDAMVDELISVM 301
           V+  +D + S     LV       G  ++LV+ SG E+ LV +Y+  V          + 
Sbjct: 249 VIYDVDFKVSDLAEGLVGG----GGHKKHLVECSGGEVFLVDKYVKTVWCKS-----DIS 308

Query: 302 YRTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAG-ISGNCIYYTDDYS 361
              V F V+ ++ E  RWE+V +L ++ LF+G + S  FS  + AG ++G  I+Y+D  +
Sbjct: 309 KSVVEFRVYNLKREEKRWEEVRDLGDVALFIGDDCS--FSVQNPAGDLAGGFIFYSDYRN 368

Query: 362 DNDYQGQGEEPDMGIFRL---CDESFQPLPYYSG 374
               +G   + D G+F +    D  F   P Y G
Sbjct: 369 GGRSRGICSDGD-GVFNVDMQGDFVFSIKPNYFG 373

[Close]

BLAST of Lsi04G017850 vs. TAIR10
Match: AT1G65770.1 (AT1G65770.1 ascorbic acid mannose pathway regulator 1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-14
Identity = 93/380 (24.47%), Postives = 160/380 (42.11%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVP----KIPHRLPPQL---PCL 60
           MADW+ LP DLL +I+  L    +  RFR++C  WRSSVP    K P R  P +   P  
Sbjct: 1   MADWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNP 60

Query: 61  IIPLYHNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILD---ETPTILLLNPL 120
             PL  + R G F    ++  F  +  +S        S GWL+  D    +  + LL+PL
Sbjct: 61  NKPLTDHRRRGEFL---SRSAFFRVTLSS------SPSQGWLIKSDVDVSSGKLHLLDPL 120

Query: 121 TRAKLRLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPS 180
           +R  L +       ++  F  + +   Y +         R  ++ R  F K++ L     
Sbjct: 121 SR--LPMEHSRKRVDLSEFTITEIREAYQVHD------WRTRKETRPIF-KRVALVKDKE 180

Query: 181 NQNDFSAVAILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMD 240
             N    V  +  +G + ++     +W   ++   +  DI+   G  YA+D  G+  V  
Sbjct: 181 GDNQ---VLGIRSTGKMMYWDI--KTWKAKEEG-YEFSDIIVHKGQTYALDSIGI--VYW 240

Query: 241 LRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYL-DIVNDAMVDELISVMYRTVRF 300
           +R     +          GD + LV+   E  +V R + +       D+      +TV F
Sbjct: 241 IRSDLKFIRFGPLVGDWTGD-RRLVECCGEFYIVERLVGESTWKRKADDTGYEYAKTVGF 300

Query: 301 EVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQ-- 360
           +V++ + E  +  +V++L +    +  ++  +  A +F G   N IY+TDD     ++  
Sbjct: 301 KVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDDTMIKVFKLD 353

Query: 361 -GQGEEPDMGIFRLCDESFQ 367
            G G   +  I+      FQ
Sbjct: 361 NGNGSSIETTIYPYAQSCFQ 353

[Close]

BLAST of Lsi04G017850 vs. TAIR10
Match: AT2G26160.1 (AT2G26160.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13
Identity = 88/356 (24.72%), Postives = 149/356 (41.85%), Query Frame = 1


Query: 3   DWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHNSR 62
           +W+ELP DL+ L ++     SD LR R++C  WRS+    P      LP           
Sbjct: 5   EWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAA-ATPKSFQCNLP----------- 64

Query: 63  CGLFNFSDNKIHFLHLPEASL----GKRRCGSSHGWLV---ILDETPTILLLNPLTRAKL 122
                 S NK+    L   +     G   C S  GWL+    + E+  I LL+P  R +L
Sbjct: 65  ------SSNKMIETVLSPTTFFRVTGPSSC-SYKGWLIRTKQVSESSKINLLSPFFR-QL 124

Query: 123 RLPPLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDF 182
             P   T  +++ F+ S + + Y I     H++ + L       ++ ++    PS  +  
Sbjct: 125 LTPSQQTL-DLLKFEVSEIRQSYEI-----HIFDKYL-------IQGVIGKEGPS--HIL 184

Query: 183 SAVAILNH------SGDLAFYGSGGGS----WTFVDDAPSDCEDIVYSDGVFYAVDKYGV 242
           S V  L++        D  +    G      WT + +   D  DI+   G  YA+D  G 
Sbjct: 185 SRVVFLDNLIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGA 244

Query: 243 VSVMDLRGSRSQVSLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDE-LISVMY 302
           +  + L    S +SL+     +  D        + L+     L I++   + +  I    
Sbjct: 245 IWWISL----SPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCIIHQLRLKKAYIRRSQ 304

Query: 303 RTVRFEVFRMEWEGPRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDD 341
           RTV F+V++M+    +W +V +L +  L V  +S     A+++ G   N IY+ D+
Sbjct: 305 RTVGFKVYKMDEYVAKWVEVRSLGDKALIVARDSCFTVVASEYHGCLNNSIYFVDN 321

[Close]

BLAST of Lsi04G017850 vs. NCBI nr
Match: gi|659105375|ref|XP_008453081.1| (PREDICTED: F-box protein SKIP23-like [Cucumis melo])

HSP 1 Score: 750.7 bits (1937), Expect = 1.2e-213
Identity = 360/392 (91.84%), Postives = 372/392 (94.90%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHN 60
           MADWTELPPDLLQ ISDYL VYSDYLRFR VC  WRSSVPKIPHRLPPQLPCLIIPLYH+
Sbjct: 1   MADWTELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPLYHD 60

Query: 61  SRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPPL 120
            RCGLFNFSDNKIHFL+LPEASL KR CGSSHGWL ILDETP+ILLLNPLTRAK RLPPL
Sbjct: 61  CRCGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPL 120

Query: 121 STFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAVAI 180
           STFPNVVSFDYSRVGREY+IRTPTGH+YTRNLRQMRDSFVKKIVLSSSPSNQNDF AVAI
Sbjct: 121 STFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQNDFLAVAI 180

Query: 181 LNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQVSL 240
           LNHSGDLAF  SGGGSWTFVDDAPSDCED++Y+DGVFYAVDKYGVVS+MDLRGSRSQVSL
Sbjct: 181 LNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQVSL 240

Query: 241 VATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEGPR 300
           VATERQLAGDIQYLV+ GQELLLVSRYLDIVND M DELISVMYRTVRFEVFRMEWEGPR
Sbjct: 241 VATERQLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVMYRTVRFEVFRMEWEGPR 300

Query: 301 WEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIFRL 360
           WEKVENLNEM LFVGGNSSMAFSAADF  ISGNCIYYTDDYSD+DYQGQGEEPDMGIFRL
Sbjct: 301 WEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQGQGEEPDMGIFRL 360

Query: 361 CDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
           CDESF+PLPYYSG SHSRRRLLPPIWVTPNPC
Sbjct: 361 CDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392

[Close]

BLAST of Lsi04G017850 vs. NCBI nr
Match: gi|778697048|ref|XP_011654245.1| (PREDICTED: F-box protein SKIP23-like [Cucumis sativus])

HSP 1 Score: 736.5 bits (1900), Expect = 2.4e-209
Identity = 355/392 (90.56%), Postives = 364/392 (92.86%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLYHN 60
           MADWTELPPDLL  ISDYL VYSDYLRFR VC  WR SVPKIPHRLPPQLPCLIIPLYHN
Sbjct: 1   MADWTELPPDLLHQISDYLTVYSDYLRFRVVCWNWRFSVPKIPHRLPPQLPCLIIPLYHN 60

Query: 61  SRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPPL 120
            RCGLFNFSDNKIHFL+LPE SL KR CGSSHGWL I+DETP ILLLNP TRAKL LPPL
Sbjct: 61  CRCGLFNFSDNKIHFLYLPEISLRKRPCGSSHGWLTIVDETPPILLLNPFTRAKLWLPPL 120

Query: 121 STFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAVAI 180
           STFPNVVSFDYSRVGREY+IRTPTGH+YTRNLRQMRDSFVKKIVLSSSPSN NDF AVAI
Sbjct: 121 STFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNPNDFLAVAI 180

Query: 181 LNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQVSL 240
           LNHSGDLAF  SGGGSWTFVDDAPSDCED++YSDGVFYAVDKYGVVS+MDLRGSRSQVSL
Sbjct: 181 LNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYSDGVFYAVDKYGVVSLMDLRGSRSQVSL 240

Query: 241 VATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEGPR 300
           VATERQLAGDIQYLVK GQELLLVSRYLDIVND M DELI VMYRTVRFEVFRMEWEGPR
Sbjct: 241 VATERQLAGDIQYLVKLGQELLLVSRYLDIVNDGMEDELIPVMYRTVRFEVFRMEWEGPR 300

Query: 301 WEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIFRL 360
           WEKVENLNEM LFVGGNSSMAFSAADF  ISGNCIYYTDDYSD+DYQ QGEEPDMGIFRL
Sbjct: 301 WEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQEQGEEPDMGIFRL 360

Query: 361 CDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
           CDESF+PLPYYSG SHSRRRLLPPIWVTPNPC
Sbjct: 361 CDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392

[Close]

BLAST of Lsi04G017850 vs. NCBI nr
Match: gi|1009108990|ref|XP_015887689.1| (PREDICTED: F-box protein SKIP23-like [Ziziphus jujuba])

HSP 1 Score: 465.7 bits (1197), Expect = 8.0e-128
Identity = 231/394 (58.63%), Postives = 287/394 (72.84%), Query Frame = 1


Query: 2   ADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPL--YH 61
           ADWT LPP+LL+ IS  L +Y DYLRFR VC  WRSS PK P  LPPQLP L++P   ++
Sbjct: 3   ADWTRLPPELLETISRNLTIYVDYLRFRCVCQSWRSSAPKTPIHLPPQLPWLMLPQSNFY 62

Query: 62  NSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLPP 121
                 FN S NK+H L+LPEAS GKRRCGSSHGWLV+LDETP++LLLNPLTRAK+ LPP
Sbjct: 63  RPHRSFFNPSTNKVHSLYLPEASHGKRRCGSSHGWLVVLDETPSVLLLNPLTRAKVHLPP 122

Query: 122 LSTFPNVVSFDYSRVGREYMIRTPT-GHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAV 181
           LSTFPNVV FDYS +GREY++R+ + G +YTR+LRQMRDSFVKK+VLS SP   N F A+
Sbjct: 123 LSTFPNVVRFDYSEIGREYLLRSSSSGELYTRSLRQMRDSFVKKVVLSCSPLEANGFIAL 182

Query: 182 AILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQV 241
           AILN +GDLAF  +G  SWT +DDA S  ED+VY DG+FYAV+KYG V+V D+ G    V
Sbjct: 183 AILNQTGDLAFCKNGDQSWTIIDDALSYSEDVVYVDGLFYAVNKYGGVAVCDVGGQSPGV 242

Query: 242 SLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEG 301
           S++ T RQ+  D+QYLV SG +L L+ RYLD+  D+M DE  +V YRTV F+V +M+W G
Sbjct: 243 SIIETPRQMGADMQYLVNSGDDLFLIPRYLDVDYDSMDDE-ANVFYRTVGFDVLKMDWRG 302

Query: 302 PRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIF 361
           PRWEKV +L    LF+G NSS++  A+DF G  GNCIY+TDDYS+ +++      D GIF
Sbjct: 303 PRWEKVSSLGGRTLFIGLNSSLSLLASDFPGCVGNCIYFTDDYSEFNFETVFGGHDSGIF 362

Query: 362 RLCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
            L D++ Q       +SH R    PP+WVTPNPC
Sbjct: 363 SLWDKTIQ----RQWNSHCRVHWPPPLWVTPNPC 391

[Close]

BLAST of Lsi04G017850 vs. NCBI nr
Match: gi|225459789|ref|XP_002284795.1| (PREDICTED: F-box protein SKIP23-like [Vitis vinifera])

HSP 1 Score: 459.9 bits (1182), Expect = 4.4e-126
Identity = 222/394 (56.35%), Postives = 291/394 (73.86%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLY-- 60
           MADW++L P+LL  I+    +Y+DY+RFRAVCH WR+SVPK PH LP QLP L++P    
Sbjct: 1   MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQP 60

Query: 61  HNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLP 120
           H++    F+ S NK HFL LPEAS  +RR GSSHGWL+ILDE P I LLNPLTR+K+ LP
Sbjct: 61  HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 121 PLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAV 180
           PLSTFPNVV F+++ VGREY +RT +G +YTR+L++MRDSF+KK +LSSSP+N +DF AV
Sbjct: 121 PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAV 180

Query: 181 AILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQV 240
            ILN +GDLA       SWTF++DA S  ED+++  G+FYAV+KYG ++V D+ GS  +V
Sbjct: 181 VILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRV 240

Query: 241 SLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEG 300
           S++   +Q  GD+QYLV+SG+ELLLV+RYLD+  D   D+  S++YRT RF+V R++ + 
Sbjct: 241 SIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQ-TSLIYRTTRFQVCRLDLKA 300

Query: 301 PRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIF 360
           PRWE V +L +  LF+G N S++ S+ DF G  GNCIYYTDDYS+++Y G G E D+GIF
Sbjct: 301 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 360

Query: 361 RLCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
            L D S +PLP     SH R R  PP+WVTPNPC
Sbjct: 361 NLEDGSIEPLP----CSHFRIRWPPPLWVTPNPC 389

[Close]

BLAST of Lsi04G017850 vs. NCBI nr
Match: gi|147780610|emb|CAN69116.1| (hypothetical protein VITISV_031843 [Vitis vinifera])

HSP 1 Score: 459.5 bits (1181), Expect = 5.7e-126
Identity = 222/394 (56.35%), Postives = 291/394 (73.86%), Query Frame = 1


Query: 1   MADWTELPPDLLQLISDYLIVYSDYLRFRAVCHRWRSSVPKIPHRLPPQLPCLIIPLY-- 60
           MADW++L P+LL  I+    +Y+DY+RFRAVCH WR+SVPK PH LP QLP L++P    
Sbjct: 1   MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQP 60

Query: 61  HNSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLVILDETPTILLLNPLTRAKLRLP 120
           H++    F+ S NK HFL LPEAS  +RR GSSHGWL+ILDE P I LLNPLTR+K+ LP
Sbjct: 61  HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 121 PLSTFPNVVSFDYSRVGREYMIRTPTGHMYTRNLRQMRDSFVKKIVLSSSPSNQNDFSAV 180
           PLSTFPNVV F+++ VGREY +RT +G +YTR+L++MRDSF+KK +LSSSP+N +DF AV
Sbjct: 121 PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAV 180

Query: 181 AILNHSGDLAFYGSGGGSWTFVDDAPSDCEDIVYSDGVFYAVDKYGVVSVMDLRGSRSQV 240
            ILN +GDLA       SWTF++DA S  ED+++  G+FYAV+KYG ++V D+ GS  +V
Sbjct: 181 VILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRV 240

Query: 241 SLVATERQLAGDIQYLVKSGQELLLVSRYLDIVNDAMVDELISVMYRTVRFEVFRMEWEG 300
           S++   +Q  GD+QYLV+SG+ELLLV+RYLD+  D   D+  S++YRT RF+V R++ + 
Sbjct: 241 SIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQ-TSLIYRTTRFQVCRLDSKA 300

Query: 301 PRWEKVENLNEMVLFVGGNSSMAFSAADFAGISGNCIYYTDDYSDNDYQGQGEEPDMGIF 360
           PRWE V +L +  LF+G N S++ S+ DF G  GNCIYYTDDYS+++Y G G E D+GIF
Sbjct: 301 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 360

Query: 361 RLCDESFQPLPYYSGSSHSRRRLLPPIWVTPNPC 393
            L D S +PLP     SH R R  PP+WVTPNPC
Sbjct: 361 NLEDGSIEPLP----CSHFRIRWPPPLWVTPNPC 389

The following BLAST results are available for this feature:

BLAST of Lsi04G017850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SKI23_ARATH	1.7e-32	29.78	F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1	[more]
FB110_ARATH	8.8e-18	27.84	F-box protein At2g17036 OS=Arabidopsis thaliana GN=At2g17036 PE=2 SV=1	[more]
FB295_ARATH	1.3e-13	28.68	Putative F-box protein At5g60060 OS=Arabidopsis thaliana GN=At5g60060 PE=4 SV=1	[more]
FB72_ARATH	3.8e-13	24.47	Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1	[more]
FB117_ARATH	3.3e-12	24.72	F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1	[more]

BLAST of Lsi04G017850 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCD1_CUCME	8.7e-214	91.84	Ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0L370_CUCSA	1.7e-209	90.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652860 PE=4 SV=1	[more]
A5AJY7_VITVI	4.0e-126	56.35	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031843 PE=4 SV=1	[more]
B9R8H5_RICCO	1.5e-125	54.68	Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1599830 PE=4 SV=1	[more]
A0A067KPD0_JATCU	1.3e-121	54.71	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08149 PE=4 SV=1	[more]

BLAST of Lsi04G017850 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17030.1	9.4e-34	29.78	F-box family protein with a domain of unknown function (DUF295)	[more]
AT2G17036.1	1.9e-18	27.72	F-box family protein with a domain of unknown function (DUF295)	[more]
AT5G60060.1	7.4e-15	28.68	Protein of unknown function (DUF295)	[more]
AT1G65770.1	2.2e-14	24.47	ascorbic acid mannose pathway regulator 1	[more]
AT2G26160.1	1.8e-13	24.72	F-box family protein with a domain of unknown function (DUF295)	[more]

BLAST of Lsi04G017850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105375\|ref\|XP_008453081.1\|	1.2e-213	91.84	PREDICTED: F-box protein SKIP23-like [Cucumis melo]	[more]
gi\|778697048\|ref\|XP_011654245.1\|	2.4e-209	90.56	PREDICTED: F-box protein SKIP23-like [Cucumis sativus]	[more]
gi\|1009108990\|ref\|XP_015887689.1\|	8.0e-128	58.63	PREDICTED: F-box protein SKIP23-like [Ziziphus jujuba]	[more]
gi\|225459789\|ref\|XP_002284795.1\|	4.4e-126	56.35	PREDICTED: F-box protein SKIP23-like [Vitis vinifera]	[more]
gi\|147780610\|emb\|CAN69116.1\|	5.7e-126	56.35	hypothetical protein VITISV_031843 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR005174	DUF295
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044424	intracellular part
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G017850.1	Lsi04G017850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 4..39 score: 4.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 3..37 score: 3.9
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 302..358 score: 1.4
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 3..37 score: 1.
None	No IPR available	PANTHER	PTHR11102	SEL-1-LIKE PROTEIN	coord: 13..392 score: 2.2
None	No IPR available	PANTHER	PTHR11102:SF101	SUBFAMILY NOT NAMED	coord: 13..392 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G017850	Csa4G652860	Cucumber (Chinese Long) v2	culsiB284
Lsi04G017850	CSPI04G26650	Wild cucumber (PI 183967)	cpilsiB284
Lsi04G017850	Cucsa.271880	Cucumber (Gy14) v1	cgylsiB436
Lsi04G017850	CmaCh09G000780	Cucurbita maxima (Rimu)	cmalsiB024
Lsi04G017850	CmoCh09G000770	Cucurbita moschata (Rifu)	cmolsiB012
Lsi04G017850	Cla007410	Watermelon (97103) v1	lsiwmB319
Lsi04G017850	MELO3C017000	Melon (DHL92) v3.5.1	lsimeB323
Lsi04G017850	ClCG05G015310	Watermelon (Charleston Gray)	lsiwcgB290
Lsi04G017850	MELO3C017000.2	Melon (DHL92) v3.6.1	lsimedB339
Lsi04G017850	Cla97C05G096400	Watermelon (97103) v2	lsiwmbB291
Lsi04G017850	Bhi09G002427	Wax gourd	lsiwgoB403
Lsi04G017850	Cp4.1LG06g00430	Cucurbita pepo (Zucchini)	cpelsiB638
Lsi04G017850	Cp4.1LG16g03350	Cucurbita pepo (Zucchini)	cpelsiB244
Lsi04G017850	Carg07928	Silver-seed gourd	carlsiB588
Lsi04G017850	Carg08651	Silver-seed gourd	carlsiB094
Lsi04G017850	CsaV3_4G037010	Cucumber (Chinese Long) v3	cuclsiB305
Lsi04G017850	CsaV3_6G047620	Cucumber (Chinese Long) v3	cuclsiB480

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi04G017850	Lsi01G005530	Bottle gourd (USVL1VR-Ls)	lsilsiB078

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G017850	Bottle gourd (USVL1VR-Ls)	lsilsiB054
Lsi04G017850	Bottle gourd (USVL1VR-Ls)	lsilsiB143
Lsi04G017850	Cucumber (Gy14) v1	cgylsiB528
Lsi04G017850	Cucurbita maxima (Rimu)	cmalsiB424
Lsi04G017850	Cucurbita moschata (Rifu)	cmolsiB412
Lsi04G017850	Cucurbita pepo (Zucchini)	cpelsiB462
Lsi04G017850	Cucumber (Gy14) v2	cgyblsiB264
Lsi04G017850	Silver-seed gourd	carlsiB324